Suncus etruscus (white-toothed pygmy shrew): 126001239
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Entry
126001239 CDS
T09902
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126001239 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126001239 (GSPT1)
03012 Translation factors [BR:
setr03012
]
126001239 (GSPT1)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
126001239 (GSPT1)
Translation factors [BR:
setr03012
]
Eukaryotic type
Release factors
126001239 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
126001239
NCBI-ProteinID:
XP_049624413
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All DBs
Position
2:complement(11102620..11125736)
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AA seq
614 aa
AA seq
DB search
MDPGGGGGGGGAGGGGSSSSDSAPDCWDQADMDAAAAGPEAPREPLSAAFSRQLNVNAKP
FVPNVHAAEFVPAFLRAAPQHPPAAAASGEAGPAASGDPSQEEPSLCEGSNSAVSMELSE
PVENGETEMSPEESWEHKEEISEVEPRSGGSSGDARPPEENAQEMMEEEEEIPKPKSVVA
PPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSW
ALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISA
RKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFL
KKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYSGLPFIPYLDNLPNFNRSVDGPIRLP
IVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGENLKIR
LKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEI
TALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKT
IAIGKVLKLVPEKD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcggcggcggcggcggaggcggcgcaggcggcggcggcagcagcagcagc
gactcggcgcccgactgctgggaccaggcggacatggacgcggcggccgcgggccccgag
gcgccccgggagcccctgagcgcggccttcagccgccagctcaacgtcaacgccaagccc
ttcgtgcccaacgtccacgccgccgagttcgtgcccgccttcctgcgcgccgccccgcag
caccccccggcggccgcggccagcggcgaggccggccccgcggcatccggggacccttct
caagaggagccgtcattgtgtgaaggttcaaattcagctgttagcatggagctttcagaa
cctgttgaaaatggagagacagaaatgtccccagaagaatcatgggaacataaagaagaa
atcagtgaagtggagccgagaagcggtggttcctcgggagatgcaagaccaccggaggaa
aatgcccaagaaatgatggaggaggaagaggagattcccaaacccaaatctgtggtcgcc
ccgccaggtgccccaaaaaaggagcatgtaaacgtggtcttcatcggtcatgttgatgct
ggcaagtctaccattggaggacagataatgtatttgactggaatggttgataaaaggaca
cttgagaaatatgaaagagaagctaaagagaagaacagagaaacttggtacttgtcttgg
gccttagatacaaaccaagaagaaagagacaagggtaaaacagtagaagttggtcgcgcc
tattttgagacagaaaagaagcatttcacaattctagatgcccctggccacaagagcttt
gtccccaacatgattggcggtgcatcccaggcagatttggcggtgctggtcatttctgct
cggaaaggggagtttgaaactggatttgagaaaggagggcagacgagagaacacgccatg
ctggcgaagacggcgggggtcaagcacctcatcgtgctcatcaacaagatggacgacccc
actgtgaattggagcaatgagagatatgaagagtgtaaagagaaactcgtgccatttttg
aagaaagtcggcttcaaccccaaaaaggatatacacttcatgccgtgctcggggctgacg
ggagcaaacctgaaggagcagtccgatttctgtccctggtacagtgggttaccgtttatt
ccgtatcttgataacttgccaaacttcaacagatcagttgatggaccaatcaggctgcca
attgtggataagtacaaggatatgggcactgtggttttggggaagctcgaatccggatct
atttgtaaaggccagcagcttgtcatgatgccaaacaagcacaacgtcgaagttcttgga
attctttccgacgatgtagaaactgactcagtagcccctggcgaaaacctcaagatcagg
ctgaaaggaatcgaggaggaggagattcttccaggcttcatactttgtgaccccaataac
ctctgtcactctgggcgcacgtttgatgcacagatagtgatcatagagcacaagtccatc
atctgcccaggctacaatgccgtgctgcacattcacacctgcatcgaggaagtcgagatc
acagccttaatctgcttggtagacaaaaagtcaggagaaaagagcaagactcgacctcgt
tttgtgaagcaagatcaagtgtgcatcgcgcgtttaaggacagctgggaccatctgcctt
gagaccttcaaggatttccctcagatggggcgcttcaccctaagagatgagggtaagacc
attgcgattggaaaagttctgaaactggttccagagaaagactaa
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