Suncus etruscus (white-toothed pygmy shrew): 126001241
Help
Entry
126001241 CDS
T09902
Symbol
MGRN1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04120
Ubiquitin mediated proteolysis
setr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126001241 (MGRN1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
126001241 (MGRN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126001241 (MGRN1)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126001241 (MGRN1)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126001241 (MGRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
126001241
NCBI-ProteinID:
XP_049624416
LinkDB
All DBs
Position
2:7514782..7526714
Genome browser
AA seq
566 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDGSDSPCEDSDRPRALYSL
EFTFDADARVAITVYCQAAEEVLNGSAVYSPRSPTLRSETVHYKRGVGQHFSLPSFKIDF
SEWKDEELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQK
QIVDRVSYLLQEIYGIENKNSQETKPTDEENSDNSSECVVCLSDLRDTLILPCRHLCLCN
SCADTLRYQASSCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSMEHEEHTCPLKK
SKSHPASLASKKPKRETSPDSVPPGYEPISLLEALNGLRAVSPALPSAPLYEEVTSSAGS
DGLSQASCPHTGLERLVESSLQTAPRTTSPDSTLHSPASPIHEDQEPLSQDSQAPPAMSS
SSESFMIEEAEETSSPKQGTRAPSFENVLQDSPEQHSCAQPSDICLPGWPTSLDMPRSLR
ATTTSRPPDLGSSSPEPGATTELTPL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagccgccgcatcgctggcgtggaggacatcgacatccaggccaac
tcggcctatcgctacccgcccaagtccggaaactactttgcttcacactttttcatgggg
ggcgagaaatttgacaccccccacccagaaggttacctcttcggagagaacatggacctg
aacttcctgggcagccgccctgtccagttcccttatgtcacgcctgcgccccatgaacct
gtgaagacactgaggagcctggtgaacatccgcaaagactccctccggcttgtgaggtac
aaggacggcagtgacagcccctgtgaggacagcgacaggcccagggcgctctacagccta
gagttcacctttgatgcagacgcacgcgtggccatcactgtgtactgccaggcagccgag
gaggtcctcaacggctcggctgtgtacagtccccggagccccactctgcgctcagagacc
gtccactacaagaggggcgtgggccagcacttctctctgccatccttcaagattgacttc
tccgaatggaaggacgaagagttgaactttgacctggaccggggtgtgttcccagtggtc
atccaggctgtggtggatgagggcgatgtggtggaggtgactggccatgcccacgtactt
ttggctgcctttgaaaagcatgtcgacggcagcttctccgtgaagcccctgaagcagaag
cagattgttgatcgggtgagctacttgctgcaggagatctacggcatcgagaacaagaac
agccaggaaaccaagcccacggacgaagagaacagtgacaacagcagcgagtgcgtggtc
tgcctgtcggacctgcgcgacaccctcatcctgccctgccgccacctctgcttgtgcaac
tcgtgcgccgacacgctgcgctaccaggccagcagctgccccatctgccgcttgcctttc
cgggcgcttctgcagatccgggctgtgcgaaaaaagcctggggcgctgtctcctgtctcc
ttcagccccgtgctggctcagagcatggagcacgaggagcacacgtgtccccttaaaaaa
tcaaagtcgcaccccgcctccctggccagcaagaaacctaaaagggaaacaagccccgac
agtgttccacctggctacgagcccatctccctgctcgaggcactcaacggcctgcgggct
gtctcccccgccttgccatcagcccccctctatgaagaggtcacttcctcggctggttct
gatggcctgtcccaggccagctgtccccacacggggctagagcgcctggtggagagcagc
ctgcagacggcaccaaggaccacatccccggacagcaccctgcactcccctgcttccccc
atccatgaggaccaggagccgctctcccaggactcgcaagcaccccctgctatgagcagc
tcctcggagagtttcatgatagaggaagctgaggagacatcatcccccaagcaagggact
cgagccccttccttcgagaatgtgctgcaggacagcccagagcaacacagctgtgcccag
ccctctgacatctgcctgccaggctggcccacctctctggacatgccccgcagcctccgt
gccaccaccacctcccggcctcctgatctgggcagctccagtcctgagcccggggccacc
accgagttaaccccgctctga
DBGET
integrated database retrieval system
