Suncus etruscus (white-toothed pygmy shrew): 126001346
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Entry
126001346 CDS
T09902
Symbol
ARHGEF40
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126001346 (ARHGEF40)
Membrane trafficking [BR:
setr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
126001346 (ARHGEF40)
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Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
DUF5610
RHG20_PH
PH_10
Motif
Other DBs
NCBI-GeneID:
126001346
NCBI-ProteinID:
XP_049624541
LinkDB
All DBs
Position
2:complement(68294913..68319591)
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AA seq
1517 aa
AA seq
DB search
MEPEPVEDCVQSTLAALYPPFEATAPTLLGQVFQVVERTYREDALRYTLDFLVPAKHLLA
KVQQEACAQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRLA
IKCLAPGGGRVQELPVPHEACAYLFTPEWLQGINKDRPTGRLSTCLLSAPSGIQRLPWAE
LVCPRFVHKGGLMVGHRPSTLPPELPSGPPGLPSPPLAEETLGTRSPGDGHNAPAEGPEG
EYVELLEVTLPVRGSPLDTESSSGLSRTRTVPTRKGAGGKGRHRRHRALVNQKGLGPRDQ
DGARPPGEGSSTGTSPGSPLGAEVLPEATVPEVAEVSAEVLGEASESCFLRPSEVGGAAQ
GPEGPPGTPRRTGKGNRRKKRAAGRGAAGRGGDSVPLSPGDKESCLETGPPESPCSPPSA
SEQGPASGSLVKEESKDSRKSELVESKEKLGPTDDKEPQPLEPCGPQGERGLEREQEELS
LEYMAGPTEPEEPLSDSPAPPQETGQEVNRDSIPEEAPSASVSDDPDIPWDMMASGFFLL
TGGVDQSGRALLTITPPISPEEPPPSPDMLSTTLHYLHSLLRPDLQKLGLSILLDLRKAP
PLPPALISVLCQLQDVGDPPLIQRLLLLTSEDPPKELPELQGAELLSENDLERVINPEEL
QRNLGGHWDSSPSHWVETHQEVARLCRLCRGVLGSVQTAIEELEGAAELEREETVRIRDP
LQKVLEDPRLTELQRDGGAILMRLRSTHSSRLEGPGPATLYQEVDEAIHQLVRLSNLHVQ
QQEQQQRVRRLQQVLQWLSGPGEEQLASFMAPGDSLSALQETELRFRAFSAEVQDRLAQA
QEALALEEDATSQKVLDVFEQRLEQAESGLHRALRLQRFFQQAHEWVDEGSARLAGAGPG
REAVLAALALRRAPEPSAGTFQEMRALALDLGSPAALREWGHCRARCQELERKIQQQLGE
DSSPRGHRRRRTDSSSSGASRGPHSPTPSLSSLLLPGSPGPRAAPSHSSLAPCGEDCEEN
SHQLGPECEGRPPRTVLIRGLEVTSTEVVDRTCSPREHVLLGRADGPWGVGTPRMERKRS
ISAQQRLVSELIACEQDYVATLNEPVPTPGPELTPELRGTWAAALNAREKLRSFHRTHFL
KELQGCATHPLRIGACFLRHGDQFSLYAQYVKHRHKLENGLAALGPPTKGNLEGSPHLPR
ALQQPLEQLARYGRLLEELLREVGPELNSERQALGAAMQLLREQETRGRDLLAVEAVRGC
ETDLKEQGQLLHRDPFTVICGRKKCLRHVFLFEHLLLFSKLKGSEGGSEIFVYKQAFKTA
DMGLTENIGDSGLCFELWFRRRRAREAYTLQATSPEIKLKWTSSIAQLLWRQAAHNKELR
VQQMVSMGIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSPGAC
SLPARVEEEAWDLDVKQIALAPETLDSSGDGSPGPRYSPSLQNPHPGSSTPTLASGGILG
FSRQSHARALSDPTTPL
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atggagccagagccagtggaggactgtgtgcagagcacactcgctgcactgtacccaccc
ttcgaggccaccgcgcccaccctgctgggccaggtgttccaggtggtggagaggacctat
cgggaggatgcgctgaggtacacgctggactttttggtgcctgctaagcacctgcttgcc
aaggtccagcaggaagcctgtgcccagtacagtggtttcctcttcttccatgaaggttgg
ccgctctgcctgcacgagcaggtggtggtgcagcttgcagccctgccctggcagctgttg
cgccctggagacttctacctacaagtggtgccctctgcagcccaggcgccccgcctagca
atcaagtgcctggccccagggggtggacgggtgcaggagttgcctgtgccccatgaagcc
tgtgcttacctgttcacacccgagtggctccagggcatcaataaggacaggcccacaggt
cgcctcagcacctgtctactctctgcaccttcaggcattcagcgactgccctgggctgag
cttgtctgccctcgatttgtgcacaaagggggcctcatggttggacatcgcccaagcaca
ctccccccagaactgccctccggacccccagggcttcccagccctcccttggctgaggag
accctgggcacgcggagccctggggatggacacaatgcccctgctgaaggacccgaggga
gagtatgtggagctactggaagtgaccctgcccgtaagggggagtcccctggacactgag
agctcctcaggcctctccaggacccgaacagtgcccacccgcaagggtgcaggagggaag
gggcgccaccggagacaccgggccttggtgaaccagaaggggctggggcctcgggatcag
gatggagcccgccctccaggcgagggcagcagcactggtacctctcctgggtctcccctt
ggggcagaggttctccctgaggctacagtcccagaggtagctgaggtctctgcagaagta
ctaggggaagcctcagaatcctgcttcctaaggccaagtgaggttgggggggcagcccag
ggacctgaaggaccacctggcacccctcgacggacaggcaaaggaaacagaaggaagaag
cgggctgcaggaagaggagcagcaggaagaggaggtgacagtgtcccactgagccctgga
gacaaggaatcttgtcttgagacaggccccccggaatctccctgcagcccgccctcagcc
agcgagcagggacctgccagtggcagccttgtgaaggaggagtccaaagattccaggaaa
tcagagttagtagagtccaaggagaagttgggacccacagatgacaaagaacctcagccc
ctagaaccctgtgggcctcaaggagagaggggcctagagagagagcaggaggaactgagc
ctggagtacatggccggacccacagagcctgaggagcctctgtctgattccccagcacct
ccccaggagactgggcaggaagtaaacagggacagtatcccagaagaggccccttcagcc
tctgtctctgatgaccctgatatcccatgggatatgatggcttctggattctttctactg
acaggcggggtggaccagagtggacgagccctgctgaccatcactccaccgatatcccct
gaggagcccccaccctccccagatatgctgagcaccacgctgcattacctccattcactg
ctcaggcctgatctacagaaattggggctgtccatcctgttggaccttcgcaaagcacct
ccactgcctccagctcttatctctgtcctgtgtcagctccaggatgtgggagaccctcct
ctaattcaacgactgctgcttctcacttcagaagacccccccaaggaactccctgaactt
cagggtgctgagttgctatcagagaatgatctggaaagagtgattaacccagaggagctg
cagaggaacttaggagggcactgggactcatctcccagtcactgggtagagacacaccag
gaagtggcaagactgtgccgcctgtgccgtggtgtgctgggttctgtgcaaacagccatt
gaggaactagagggagctgcagagctggagagagaggagacagtcagaatacgtgaccca
ttgcagaaggtgctggaagatccccggctgacagagttgcagagggatggtggtgccatc
ctgatgaggctgcgctccactcacagcagcaggctggaagggccaggcccagccacactg
tatcaggaggtggatgaagccattcaccagctcgtgcgtctctccaacctgcatgtgcag
cagcaggaacagcagcagcgtgtgcgtcgactccagcaagtgctgcagtggctctcaggc
ccgggggaagaacagctggcaagcttcatggctcccggggactccttgtctgcccttcag
gaaactgaactgcgtttccgggctttcagtgcagaggttcaggatcgcctggcccaggcc
caggaggccttagcattggaagaggatgccacttcccagaaggttctggatgtctttgaa
cagcgtttggagcaggctgagagtggcctccatcgggcactgaggctgcagcgcttcttc
cagcaggcacacgaatgggtcgacgaaggttcagcgcggctcgcaggtgcagggccaggc
agggaggctgtgctggccgccctggccttacgtagggccccagagcccagcgccggtacc
ttccaggagatgcgggccctggccctggacttgggcagccccgcggccctgcgcgagtgg
gggcactgccgagcccgttgccaggagctggagaggaagattcagcaacagttgggcgag
gactcgagtcccaggggccaccggcgaaggcgaacagacagctccagcagtggcgcctcc
cggggtcctcatagccccacgcccagtctcagctccctgctcctccccggcagccctggg
ccacgggcagccccctcccacagctccctggccccctgcggggaggactgtgaggagaac
agccaccagctaggccccgagtgcgagggtcgacctcccaggactgtgctgatccgaggg
ctggaggttacgagcacggaggtagtggacaggacctgctcaccccgggagcacgtactg
ctgggccgggccgacgggccctggggagtgggcaccccccggatggagcgcaagcggagc
atcagtgcccagcagcgtctggtgtccgagctgattgcctgtgaacaggactacgtggcc
accttaaacgagccagtgccaacccctgggccagagctgaccccagaactgcggggcacg
tgggctgccgccctaaatgcccgggagaagctccgcagcttccatcggacacactttctg
aaggagcttcagggttgtgctacccacccactgcgcatcggagcgtgtttcctgcgccac
ggggaccagttcagtctttacgcccagtatgtaaagcaccggcacaaactggaaaatggt
ctggctgcacttgggcccccaaccaagggtaacctggagggcagccctcacctgccccgg
gcactacagcagcctctagagcagctggcccggtatggtcgactcctcgaggagctccta
agggaagttggacctgagctgaattctgagcggcaggcccttggagctgccatgcagcta
ctccgggaacaggagacccgtggcagagacctgttggctgtggaggctgtgcgtgggtgt
gagacagatctgaaggagcagggccagctcctacatcgagaccccttcacagtcatttgt
ggcagaaaaaagtgcctacgccatgtctttctctttgagcatcttctcctcttcagcaag
ctcaagggctctgagggaggatcagagatctttgtttacaagcaggccttcaagactgct
gacatggggctcacagaaaatatcggggacagcgggctctgctttgaactgtggtttcgg
cgccggcgtgcacgagaggcatacactctgcaggcaacctcaccagagatcaaactcaag
tggaccagctctattgcccagctgctatggagacaggcagcccacaacaaggagctccga
gtacagcagatggtctccatgggcattgggaataagcccttcctggatattaaggctctt
ggggaacggacactgagtgccctgctcactggaagagccgccagaacccgggcctcggtg
gcggtgtcatcctttgagcatgccggcccctcccttcccggcctctcaccgggagcctgc
tccctgcccgcccgcgtcgaggaggaggcctgggatctggacgtcaagcaaattgccctg
gcaccagaaacacttgactcttctggagacgggtccccaggaccaagatacagccccagc
ctgcaaaacccccatcctgggagcagcactcccaccctggccagtggagggatcttaggt
ttctccagacagagccatgcccgagccctgagtgaccccaccacacctctgtga
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