Suncus etruscus (white-toothed pygmy shrew): 126001347
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Entry
126001347 CDS
T09902
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126001347 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
126001347 (ACIN1)
03015 mRNA surveillance pathway
126001347 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126001347 (ACIN1)
03041 Spliceosome [BR:
setr03041
]
126001347 (ACIN1)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126001347 (ACIN1)
Spliceosome [BR:
setr03041
]
Complex C
Other components
EJC/TREX
126001347 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
126001347
NCBI-ProteinID:
XP_049624546
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All DBs
Position
2:66114283..66174955
Genome browser
AA seq
1252 aa
AA seq
DB search
MPEAVGTDPSTSRKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKG
ALMLENLQKHSTPHAAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEG
KSSVSEEKGDSDDEKRRKGERRSTRVRQARAKLSECSQAAEEEEDQETPSRNLRVRADRN
VKTEEEEEEEEEEEEEEEEEDDDDEGQKSKDAPVLKQFEVEEGGELSKAKLEDVIDEKPQ
TIRSPEQEVLERGGRMTRSQEEARKSLLSRHPQPEREMQTASPLEDEGKEIKSSKDLEEK
SKSPSPPRLTEDVEKVPHVLQPEQTASEEETPPPLLTKEAALPPPNTQLQSEEVETVEGP
APPVLTQLSPPNTDAEGREVLASQHTAQTVGSVAPLTSPMDAKAEPLVEKMPESALPSVQ
KSTRADSTQKVTEAELEKSVQPLALKMEELAPSKGVPEESLNKPSLEQKEGTGTSPALLP
RPGLKQSADSSSRSSSSSSSSSRSRSRSPDSSGSQSHSPSRSQQRDASQIHTVTNPHGRS
TLGSRSTSESRSRSRSRSRSASSSSRKSLSPGVSRDSSISYTETKDLSSGQEVATPPVSQ
LQAFEPPERTSTPASLRGRRVSQSEPVEKRVIQRLQPERGSPKKCEAEEAEPPAATQPQT
SESQTSHLPESERTQHTVEEKEEVTMDTNENRPENEVLEPPMTITDQVSNDDRPEGSAED
EEKKESTLPKSFKRKISVVSATKGVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITT
ESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAE
GQENGQREEEEEKEPEAEPPVPPQVSVEVALPPPVEHEVKKVTLGDTLTRRSISQQKSGV
SITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIK
SHCFVTYATIEEAVATRTALHGVKWPQSNPKFLCADYAEQDELDYHRGLLVDRPSEAKAE
EQGVPRPLHPPPPPPAQPPQHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDK
VREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPL
TDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDR
ERERDRDRDRGDRDRERERDRERGRERDRRDTKRHSRSRSRSTPVRDRGGRR
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccgtcgggacggacccgagcacctcacgcaagatggcggagctggaggag
gtgactctggacgggaagcctctgcaggcgctgcgggtgaccgacctgaaggccgccttg
gagcagcgaggcttggccaagagcgggcagaagagcgccctggtgaagcggctcaaaggg
gctctaatgctagaaaatttacagaaacactcaacaccccatgctgcattccagccaaat
tctcagattggcgaggaaatgagccagaacagtttcataaagcagtatctggaaaagcag
caggagctacttaggcagcgtttggaacgtgaagctcgcgaagctgccgaacttgaagga
aaaagctctgtttctgaagagaagggtgactctgatgacgagaaaagaaggaaaggagag
cgacgatcaaccagggttagacaggcaagagctaaactctctgaatgcagccaggctgct
gaagaggaggaagatcaggaaacaccatccagaaatctgagggtcagagcagatcgaaat
gttaaaactgaagaagaggaggaggaagaagaggaagaagaagaagaggaggaagaggaa
gatgatgacgatgaggggcaaaagtctaaagatgcaccagtcctgaaacagtttgaagta
gaagaggggggagaattgtccaaagcaaaactagaagacgtgatagatgagaaaccccag
accataagatccccagaacaggaagtgttagaacgaggaggaaggatgacaagatcccag
gaagaggcaagaaaaagtcttctgtccagacatccacagccagagagagagatgcaaact
gcttcaccccttgaggatgaaggaaaggaaattaaatcttcaaaagacttagaggaaaaa
tcaaagtctccttcccccccgcgattgacagaagatgtggagaaagtccctcatgtgctg
cagccagagcagactgccagtgaggaggagactcccccacctttacttaccaaggaagcc
gctttgccaccaccaaatacacaactgcagagtgaagaagtagagactgtggaaggccca
gccccccctgttctcactcagttgtcacctcctaatacagatgctgagggtagggaggta
ttagcatctcaacacactgcccaaacagtgggaagcgtggctcctttgacaagtcctatg
gacgccaaagcagaacctttagttgagaaaatgccggagagtgccctgccttcagttcag
aaaagcacacgagctgattcaacacagaaggttactgaagctgagttagaaaaatctgtt
caaccactcgccctaaaaatggaggagttagcaccatccaaaggggtccctgaagaatct
ctgaataagccatctttggaacagaaagaaggcacagggacttctcctgctcttctgcct
aggcctggattaaaacagtcagctgactcctccagccgttcctcctcctcttcctcctcc
agttctaggtcaagatcacgctctcctgacagttcaggctctcagtctcactcgccttcc
agatcccagcagagagatgcatctcaaatacatactgtcaccaatcctcatggtcgatcc
accttgggttccagatctacatctgagtccaggtcacgttcccggtctcgttctcgttca
gcttcaagcagtagcagaaaatctctgagccctggggtctccagggacagcagcatcagc
tacactgaaaccaaagatctctcttctggtcaggaggttgcaactccaccagtgtcacaa
ctgcaggcctttgagcccccagagaggacctccactccagcctctctccgagggaggcgt
gtgagccagtctgagccagtggaaaagcgtgtcatccagaggttacagcctgaaaggggg
agcccaaagaagtgtgaagcggaagaggcagagccaccagctgccacacagcctcaaacc
tcagagtctcagacctctcacctaccagaatcagaaaggactcagcatactgttgaggag
aaggaggaagtgaccatggacacaaatgaaaacagacctgaaaatgaggttctggagccc
cccatgactatcacagaccaagtcagcaatgatgaccgcccagaaggcagtgctgaagat
gaggagaagaaagagagcacgctgcccaaatcattcaagcggaagatctccgttgtctca
gctaccaagggagtgccggctggaaacagtgacacggaggggggccagcctggtcgcaag
cggcgttggggagccagcacagctactacacagaagaagccctccatcagtatcaccacg
gaatcactcaagagcctcatccccgacatcaaacccctggcggggcaggaggctgtggtg
gatcttcatgctgacgactcccgaatctctgaggatgagacggagcgtaatggtgacgat
gggacccatgacaaagggctgaaaatatgccggactgtcactcaggtagtacctgctgag
ggccaggagaatggacagagggaagaggaagaagagaaggagcctgaagcagagccccct
gtaccgccccaggtttcagtagaggtggccttgcccccacctgtggagcatgaagtaaag
aaagtgactttaggagatactttgacccgacggtccattagccaacagaagtctggagtc
tccattaccattgatgatccagtcagaactgctcaggtgccctcaccaccccggggcaag
atcagtaacattgtccacatctccaatttggttcgccccttcactttaggtcaattgaag
gaattgttggggcgaacaggaactctggtggaagaggccttctggattgacaagattaaa
tctcactgctttgtaacgtatgcaaccatagaagaagctgttgccacccgaacagcactg
catggggtaaaatggcctcagtccaacccgaagttcctttgtgctgactatgctgaacaa
gatgagctggattatcaccggggcctcttggtggaccgtccttctgaagctaaggctgag
gagcaaggtgtgccacggcccctgcaccccccacctccacctcctgcccagccaccacag
cacccccgggcagaacagcgggagcaggagcgggcagtgagggaacaatgggcagagcgg
gaacgggaaatggagcggcgagagcgaactcggtcagaacgtgaatgggatcgggacaaa
gttcgagaaggaccccgttcccgatcacggtcccgggaccgtcgccgtaaggaacgtgca
aagtctaaagaaaagaagagtgagaagaaagagaaagctcaggaggagccacctgccaag
ctactggacgaccttttccgtaagaccaaggctgctccctgtatctactggctcccacta
actgacagccagattgttcagaaggaggctgaacgggccgagcgggccaaggagcgggag
aaacggcggaaggagcaagaagaggaggagcagaaggagcgggagaaggaagccgagcga
gagcggaaccgacagctagagcgggagaagaggagggagcatagccgggagagggacagg
gaaagagagagggacagggaccgggacagaggggatcgagatcgagaacgggaaagggac
cgggaacgaggccgggagagggaccgcagagacaccaagcgccacagcaggagccggagt
cggagcacacctgtgcgggaccggggtgggcgccgctag
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