Suncus etruscus (white-toothed pygmy shrew): 126001383
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Entry
126001383 CDS
T09902
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
126001383 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
setr03400
]
126001383 (APEX1)
Enzymes [BR:
setr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
126001383 (APEX1)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
126001383 (APEX1)
BRITE hierarchy
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
126001383
NCBI-ProteinID:
XP_049624599
EnsemblRapid:
ENSSRTG00000035007
LinkDB
All DBs
Position
2:complement(69462379..69464917)
Genome browser
AA seq
317 aa
AA seq
DB search
MPKRGKKGEVAEDGDEPKTEPESKKSKAGAKKNEKETAEGPILYEDPPDQKTSPSGKSAT
IKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSESKLPAELQELPGLSHQYWAS
PSDKEGYSGVGLLSRQCPIKVSYGIGEEEHDQEGRVIVAEFEAFVLVTAYVPNAGRGLVR
LEYRQRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG
ELLQAVPLADSFRHLYPDTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLPALCDSKIR
SKAMGSDHCPITLYLAL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgtgggaaaaagggagaagttgcagaagatggggatgaacccaagactgag
ccagagtccaagaagtctaaggcaggagcaaagaaaaatgaaaaagagacagcagaagga
ccaatcctttatgaggaccccccagatcagaaaacgtcacccagtggcaaatcagccacc
atcaagatctgttcctggaatgtggatgggcttcgggcctggattaagaagaaaggttta
gattgggtcaaggaagaagcaccagatatcctgtgcctccaagagaccaaatgttcagaa
agcaaactaccggctgaacttcaagagctgcctggactgtcacatcagtactgggcatct
ccttcagacaaagaagggtacagtggcgtgggcctactctcacgccagtgccccatcaaa
gtctcttatggcattggtgaggaagaacacgatcaggagggccgggtgatcgtggctgaa
tttgaggcatttgtgctggtaaccgcctatgtaccaaacgcaggccgagggctggtgcgc
ctcgagtaccgacagcgctgggatgaagcttttcgcaagttcctaaaggacttggcttcc
cgcaagcctcttgtgctatgtggggacctcaatgtggctcatgaagagattgaccttcgc
aaccccaagggaaacaaaaagaatgctggctttacaccccaagaacgccaaggctttgga
gagctgctacaggccgtgcctctggctgacagcttccgtcacctctaccctgacacagcc
tatgcctacaccttttggacttatatgatgaatgctcggtccaaaaatgttggttggcgt
cttgattacttcctattgtctcagtctttgttacctgcattgtgtgacagcaagattcgt
tccaaggccatgggcagtgaccactgtcccatcaccttatacttagcactgtga
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