Suncus etruscus (white-toothed pygmy shrew): 126001460
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Entry
126001460 CDS
T09902
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03008
Ribosome biogenesis in eukaryotes
setr05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126001460 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
126001460 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126001460 (DROSHA)
03009 Ribosome biogenesis [BR:
setr03009
]
126001460 (DROSHA)
03036 Chromosome and associated proteins [BR:
setr03036
]
126001460 (DROSHA)
Enzymes [BR:
setr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
126001460 (DROSHA)
Messenger RNA biogenesis [BR:
setr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
126001460 (DROSHA)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
90S particles
RNase
126001460 (DROSHA)
Prokaryotic type
rRNA processing factors
126001460 (DROSHA)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
126001460 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
5_3_exonuc
YcaO
Motif
Other DBs
NCBI-GeneID:
126001460
NCBI-ProteinID:
XP_049624686
LinkDB
All DBs
Position
2:70768927..70908291
Genome browser
AA seq
1395 aa
AA seq
DB search
MSFHPGRGCPRGRGGGGGPGARPASAPAFRPQNLRLLHPQHQQQTPPPPPAQFPYEPPSA
PPAAFASSPGTPAFLPPRPDFVPFPPPAPPSAPGPMPPCPVRPPYPNHQLRPPFPVPPCF
PPVPPPMPCPNNPPVPGAPPGQGAFPFMVPPPSLPHPHQHPPPPALPPQQQVNYQYPPGY
PHPGFPPPNLGSFPSSPGGSGGGAFPPSAGSGSGGGGTSPHFRHLPPYPLPKAPPERRGT
PERLKHYDEHRHREHSHGRGERHRSLDRRERGRSPERRRPDGRCYRPPDYERGRTPSRHR
SYERSRERERERHRHRDGRRSPSLERSYNKEFKKSGRSYGLSGTPEPAGCTPDLPGEIHK
NADSWAPAPETVNPRSPSREKKRARWEEEKDRWNDSQSSGKEKNFTSIKEKEPEEMLPDK
NEEEEEELLKPVWIRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYDRFEEELGSRQERA
KAARPPWEPPKTKLDEDLESSSESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLH
DELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVS
PPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPEN
FCVKGLELFSLFLFRDILELYDWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSM
HQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDR
EQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLA
QREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHL
DKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRK
KGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATY
RTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEE
AKQLFGRLLFNDPDLREVWLNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFT
HVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRS
SLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHT
FMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYT
VAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWER
EHQEKEPDETEDIKK
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccacccaggacgagggtgtccccgtggccgaggaggaggagggggacccggt
gcccggcctgcatcagcccccgccttccgaccccagaacctgcgcctgctacacccgcag
catcagcagcagaccccgccacctccacccgcgcagttcccctacgagccccccagcgcg
cccccagccgccttcgccagctcaccaggcaccccggctttcctgccaccccggcctgac
ttcgtgccctttccaccgcctgcaccaccctcggcacccggcccgatgcccccttgccca
gtacgaccgccctaccctaaccaccagctacggcccccgttccccgtgccaccctgcttc
ccccctgtgccaccccctatgccttgccccaataaccccccggtgcctggcgcaccccca
ggccagggcgccttccccttcatggtgccaccgccctccctgccgcacccgcaccaacac
ccgccgccacccgccctgccaccgcagcagcaggtcaactaccagtacccgcccgggtac
ccgcaccccggcttcccgccccccaacttgggcagcttccccagcagccccggtggcagt
ggcggtggtgctttccccccaagcgctggcagtggcagtggtggtggtggcaccagccca
cactttcgccacctgccgccctacccgctgcccaaggcgccccccgagcggcggggcacc
cccgaacggctcaagcactacgacgagcaccggcaccgggagcacagccacgggcgcggc
gagcgtcaccgctccctggaccggcgagagcgaggccgcagccccgagcgccgcagaccc
gatggccgatgctaccggcccccggactatgagcgcggccggaccccctccaggcaccgg
agctatgagcggagcagagagcgggaacgagagagacacaggcaccgggatggccgaaga
tcaccttccctggaaaggtcctacaataaagagtttaagaaatctggaaggagttatggt
ttgtcagggactccagagcctgctggatgcacaccagacttacctggggagattcacaaa
aatgccgattcttgggccccagcccctgagactgtgaatcctcgttccccaagtagagag
aagaagagagcccgctgggaggaagagaaagacagatggaatgacagccagagctcaggc
aaggagaagaactttacctccatcaaggaaaaagagccggaggagatgctgcctgacaag
aatgaggaggaggaggaggagctcctgaagccagtgtggatccgatgcacccactcggaa
aactactattccagtgaccccatggaccaggtgggggattctaccgtagttgggaccagt
cggctccgtgacttatacgacaggttcgaggaggagttggggagccgacaagagagggcc
aaggccgccagacctccatgggaacctccaaagacgaagcttgatgaagacctggagagt
tccagcgagtccgagtgtgagtctgatgaagacagcacctgctccagcagctccgactca
gaagtcttcgatgtcatcgcggaaatcaaacgcaaaaaggcccatccagaccggctgcat
gatgaactatggtacaacgacccgggccagatgaatgatggtccgctctgcaaatgcagc
gccaaggcgagacgcactgggatcaggcacagcatttaccctggagaggaggccatcaaa
ccctgccggcccatgaccaacaatgccggccgcctcttccactaccggatcaccgtctcc
cccccgactaacttcttaactgacaggccaactgttatcgaatatgatgaccacgagtat
atctttgaaggattttctatgtttgcacatgctcccctgaccaatatcccactgtgcaaa
gttatccggttcaacatagactacacaatccacttcattgaagaaatgatgccagagaat
ttttgtgtgaaaggacttgaactcttttcactattcctattcagagatatcttggagtta
tatgactggaatcttaaaggtcctttgtttgaagacagtcctccctgttgcccgagattt
catttcatgccacgttttgtgcggtttctgccagatggaggaaaggaagtgctgtccatg
caccagattcttctctacttgctacggtgcagcaaagcgctggttcctgaggaggagatt
gccaacatgcttcagtgggaagaactcgagtggcagaaatatgctgaggaatgcaaaggc
atgatcgtcaccaaccctggaacgaaacccagttcagtccgcatcgatcaactggatcgt
gaacagttcaaccccgatgtgattacttttccgatcatcgtacacttcgggatacgcccc
gcacagctgagttacgcaggagatccacagtaccagaaactgtggaaaagctatgtgaaa
cttcgtcacctcctagcaaacagtcccaaagtcaagcaaacagacaagcagaagttggca
caaagggaggaagcgctccagaagatccggcagaagaataccatgaggcgagaagtcact
gtggagctcagcagccagggattctggaagaccggcatacgctctgatgtctgtcagcat
gcaatgatgctgcctgttctgacccatcatatccgctaccaccagtgcctgatgcacctg
gacaaactgattggctatactttccaggaccgctgtcttctacaactggccatgactcac
ccgagccatcacctaaattttggaatgaatcctgatcatgccagaaactctctgtccaac
tgcggaatccggcagcccaaatatggggacagaaaagttcaccatatgcacatgcggaaa
aaaggaattaacactttaataaatattatgtcacgtcttggacaagatgacccaactccc
tcaaggatcaatcacaatgaacggttggagttcttgggagatgctgtggttgagtttctg
accagtgtccatttgtactatttgttccccagtctggaggaaggaggtctggccacctac
cggacagccatcgtacagaatcagcacctcgccatgctcgccaagaaacttgaactggat
cgattcatgctttatgctcacggacctgacctttgtagagaatccgacctacggcatgca
atggctaattgttttgaagctttaataggagctgtttacttggagggaagcctggaggag
gccaaacagctatttggacgcttactctttaatgatccagatctgcgcgaagtctggctg
aattacccgctccaccctctccagctgcaagaacccaataccgatcgccagctcattgag
acttctccagtgctgcagaaactgacggagtttgaagaagctattggagtcattttcacg
cacgtacgactgctggccagagccttcacgctgagaactgtgggcttcaaccatctgacc
ctaggccacaatcagaggatggaattcctaggtgactcaataatgcagctggtggctacc
gagtatttattcattcacttccccgatcatcatgaaggacatttaactcttctgcggagc
tctctggtgaacaacagaacgcaggccaaggtggcggaggagctgggcatgcaggagtac
gccatcaccaacgacaagaccaagaggccggtggccttgcgcaccaagaccttggcggac
cttttggaatcttttattgcagccctctacattgataaggacttggaatatgttcacact
ttcatgaacgtgtgtttcttcccacgactaaaagagttcatcctgaatcaggactggaat
gaccccaaatcccagcttcagcagtgctgtttgacacttcgaacagaaggcaaggaacct
gacatccctctgtataagactctgcagactgtcggaccctcccacgctagaacctacaca
gtggccgtttacttcaagggagaaagaatcggctgtggaaaaggaccaagtattcagcaa
gcggaaatgggagcagctatggatgcacttgagaaatataactttccccagatggctcat
cagaagcggttcattgaacggaaatacagacaagagttaaaagaaatgaggtgggaaaga
gagcatcaagagaaagagccagacgagaccgaagacatcaagaaataa
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integrated database retrieval system
