Suncus etruscus (white-toothed pygmy shrew): 126001473
Help
Entry
126001473 CDS
T09902
Symbol
ERBIN
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
126001473 (ERBIN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_2
PDZ_6
LRR_NXF1-5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
126001473
NCBI-ProteinID:
XP_049624705
LinkDB
All DBs
Position
2:124111423..124190129
Genome browser
AA seq
1458 aa
AA seq
DB search
MTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEE
LPKQLFNCQSLHKLSLADNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVV
EASVNPIAKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTM
NRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKN
NIEMIEEGISACENLQDFLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLVS
IEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNITVLFLHSNKLETL
PEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKALIPLQNETDSETQKM
VLTNYMFPQQPRTEDGMFMSDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNL
KRYPTPYPDELKNMVKTVQTIVHRLKDEETNEESGKDLKPHEDQQVVNNDVGIKTSENTT
TVRNKPDEREKYLIANSIQKTNEPEADISPGKLPVTVNMKASENSKHTVNHNDVFEESED
LSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKDTDSLSDEVTHNSNQNNSNCSS
PSRMSDSVSLNTDSSQDTSLCSPVKQTHIGINSKIRQEDENFNSLLQNGDILNHSAEEKF
NVHDKKNFKLTEYDLNIEERLVLIEKGVDSTATSNESHKLDHINMNLNKLVTNESFQPEV
VERSKAQDIMLGTGFLNINTKGEPEHLENGNEYPNLECVNKVNGHSETSEPSRRTDPHNI
DSSVEVGISKSTEDLSPQRSGPIISVVKSHSITNMETGGLKIYDILSDNGPQPPSATVKV
TSTIDGKNIVRSKSATLLYDQPLQVFTGSSSSSDLISGTKAICKFDSNHNPEEPNILRGP
TSSGPQSIPQIYGPPQYNIQYSSNAAVKDNLWHSKQNPQIDVGFSSQHLPRQESTENHSY
AKFSANMNFSNHNNVRANTGYHLHQRIGPGRHGEMWAISPNDRLVPGATRATIQRQSSVS
STASVNLGEPGSARRAQIPEGEYCSYRELHSVGKTTPMMSGSQRPLSARTYSIDGPNASR
PQSARPSINEIPERTMSVSDFNYSRTSPSKRPNARVGSEHSLLDPPGKSKVPHDWREQVL
RHIEAKKLEKSMLSRSFNSNFTAVSSFHYGSSRDLHSSQGSLALSVADGRISGGHMFRHP
QIPCPGDSCQDDVFISGQQNYSATTLSHKDVPDSMMKMPLSNGQMGQSLRPQATYSQIHH
PLPQAAVARHPSREQLIDYLMLKVAHQPPYTQPHCSPRQGHELARHEIRVRVEKDPELGF
SISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSL
LKTFQNTVELIILREVSS
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaaacgaagtctgtttgtgcggttggtgccatgtcgctgtctacgaggcgaa
gaggagactgtcactactcttgattattctcactgcagtttggagcaggttcccaaagag
atttttacttttgaaaaaacattggaggagctctatttagacgctaatcagattgaagaa
cttccaaagcaactttttaactgtcagtctctacacaaactgagtttggcagataatgat
ttaacgacattaccagcatctattgcaaatctcattaatctcagggaactggatgtcagc
aagaatggaatacaggagttcccggaaaatataaaaaattgtaaagttttgacagttgtg
gaggccagtgtaaaccctattgctaagcttcctgatggattttctcagcttttaaatcta
acccagttgtatctgaatgatgctttccttgagttcttgccagctaattttggcaggtta
actaaactccagatattagaacttagagaaaaccagttaaaaatgttgccaaaaaccatg
aatagactgacccagctggaaagactggatctgggaagtaatgaattcacagaagtgcct
gaagtacttgaacagctaagtggattgaaagaattttggatggatggtaatagactgact
tttattccagggtttattggtagtttgaaacagctcacatatctggatgtttctaaaaat
aatattgaaatgattgaagaaggtatttcagcatgtgaaaatcttcaagatttcctcttg
tcaagcaattctcttcaacagctgcccgaaacaattggttcattgaaaaatataacaact
cttaaaatagatgaaaatcaactaatgtatctgcccgattctataggagggttagtatca
atagaagaactggattgtagctttaatgaaattgaagctttgccttcatctattggacag
cttactaatataagaacttttgctgcagatcataattacctgcaacaattgcccccagag
attgggaattggaaaaacataactgtgttatttcttcattctaataaacttgagacactt
ccagaggaaatgggtgatatgcaaaaactaaaagtcattaacttaagtgacaataggtta
aagaatttgccctttagctttacaaagctacaacaattgactgctatgtggctctcagac
aatcagtcgaaagccctgatacctctgcaaaatgagactgattcagagacccagaaaatg
gtgctcactaactacatgttcccgcagcagccaagaactgaagatggtatgttcatgtca
gataatgaaagttttaatccttcattgtgggaggaacagagaaaacaacgggctcaagta
gcatttgaatgtgatgaagacaaagatgaaagggaggcacctcctagggagggaaattta
aagagatatccaacaccatacccagatgagcttaagaatatggtcaaaactgttcaaacc
attgtacatcgattaaaagatgaagaaactaatgaagaatctggcaaagatttgaaacca
catgaagatcagcaagttgtaaataatgatgtgggcataaagacttcagaaaatactact
acagtaagaaacaaacctgatgaaagagaaaaatatctgatagcaaactccatacagaaa
accaatgagcctgaagctgatatcagtcctggtaaactaccagtgactgtaaatatgaaa
gcatctgagaactcgaagcatactgttaatcataatgatgtgtttgaggaatctgaagac
ctttcatctgatgaagaaatgaaaatggcagagatgcgaccaccattaattgagacttct
attaaccagccaaaagtggtagcacttagtaataacaaaaaagatgatacaaaggataca
gattcattatcagatgaagttacgcacaatagcaaccaaaataacagcaactgctcttca
ccatctcggatgtctgattcagtttctcttaatactgatagtagtcaagacacctcactc
tgttctccagtgaaacagactcatattggtattaattccaaaatcaggcaagaagatgaa
aatttcaacagccttttacaaaatggagatattttaaatcattcagcagaggaaaagttt
aatgttcatgataaaaagaattttaagttaactgaatatgatttgaatatagaagaacga
ttagttcttattgagaagggtgttgactcaacagccacatctaatgaatctcacaaattg
gatcatattaatatgaatcttaataaacttgtaactaatgaatcttttcaaccagaggta
gtggaaagatcaaaggcacaagatataatgcttggaacaggctttttaaacattaatact
aaaggagaacctgagcatttggaaaatggaaatgagtatcctaatctggaatgtgtaaat
aaggttaatggacattcagaaacttcagagccttctaggagaactgacccacataacatt
gattcttctgttgaagtgggtatttctaaaagcactgaagatctttcacctcagagaagt
gggccaattatatctgttgtgaaatcacatagcatcacaaatatggagactggagggtta
aaaatatatgacattctaagtgataatggacctcagccaccaagtgccacagttaaagtc
acttctactattgacggaaaaaatatagtcaggagcaagtccgctacacttttatatgat
caaccattgcaagtgtttactggttcttcttcttcttctgatttaatatcaggtacaaag
gcaatttgtaaatttgattcaaatcataatcctgaggaaccaaatatactaagaggccct
acatcaagtggcccacaatctatacctcaaatatatggtcctccacaatataatatccaa
tacagtagtaatgcagcagtcaaggacaatttgtggcactctaaacaaaatccccaaata
gatgttggtttttcttctcagcatcttcctagacaggaaagcacagaaaatcacagttat
gcgaagttttctgccaacatgaatttctctaaccataacaacgttcgagctaatactggc
taccatttacatcagagaattggccctggaagacatggggaaatgtgggccatttcgcca
aatgatcgacttgttcctggagcaactcgagctacaattcagcgacaaagtagtgtgtcc
tctacagcctctgtaaatcttggtgagccaggctctgcaagacgggctcagattcctgaa
ggagagtattgttcatacagagagctgcattcagtgggaaaaactactccaatgatgtca
ggatcacagagacctctttctgcacgcacatatagcattgatggcccaaatgcatcaaga
ccacagagtgctcgaccctctattaatgaaataccagagagaactatgtcagttagtgat
ttcaattattcacggactagtccttcaaaaagaccaaatgcaagggttggttctgagcat
tctttattagatcctccaggaaagagtaaagttcctcatgattggcgagaacaagttcta
cgacacattgaagcaaaaaaattagaaaagagcatgctgtcaaggtcctttaattccaat
tttactgctgtaagcagctttcactatggcagctctagggatctgcatagcagccaaggt
agtcttgccttgagtgttgcagacggaagaatttctggtgggcacatgttccgacatccc
cagataccctgtccaggagattcttgtcaagatgatgtattcatttcaggacagcagaac
tactcagctactacacttagtcacaaagatgttccagacagcatgatgaaaatgcctttg
agtaatggacagatgggccagtctctcaggccacaagcaacatatagtcaaatacaccac
ccccttcctcaggcagctgtggcaaggcatccctctagggaacaacttattgactacttg
atgctgaaagtggcccaccagcctccatatacacagccccattgttctcctagacaaggc
catgaattggcaaggcatgagattcgtgtgagagttgaaaaggatccagaacttggattt
agcatatcaggaggtgttggggggagaggaaacccatttcgacctgatgatgatggtata
tttgtaacaagagtacagcctgaaggaccagcatcaaaattactacaaccaggtgataaa
attattcaggcaaatggttacagttttatcaatattgaacatggacaagcagtgtccttg
ctaaaaactttccagaacacagttgaactcatcattttacgagaggtttcttcataa
DBGET
integrated database retrieval system
