Suncus etruscus (white-toothed pygmy shrew): 126001548
Help
Entry
126001548 CDS
T09902
Symbol
ARHGEF28
Name
(RefSeq) rho guanine nucleotide exchange factor 28
KO
K21072
A-kinase anchor protein 28
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
126001548 (ARHGEF28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126001548 (ARHGEF28)
Membrane trafficking [BR:
setr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
126001548 (ARHGEF28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
PHD
Ank_2
Prok-RING_1
PH_13
SOS1_NGEF_PH
PHD_2
C1_2
Motif
Other DBs
NCBI-GeneID:
126001548
NCBI-ProteinID:
XP_049624790
LinkDB
All DBs
Position
2:130245775..130537448
Genome browser
AA seq
1698 aa
AA seq
DB search
MELSCSKVPLYGQTMVHATFDKNVYLPKDAEFYFIYNGAHQRHIAIAERAEDNVLQSWIP
GHGCQETVTVSVCLCSEGYSPVTMGSSSVTYVDNMACRLARLLVTQADRLTTGSHQSLLT
PFALPAGALPALDEELVLALAHLELPQGWTVLGNSSLEVSLYRESLLHLAVRWGLAKLSQ
FLLCLPGGVQALDLPNEEGATPLDLAVHGGHSKLVEDITNFQGPCSPGFSRVQLREDVFL
QYIHASETLTLTLNHTAEHLLEADIKLFRKYFWDRAFLIKALGEQEVRPKTQPAMPSSAA
ETEEEEVKNLESSRSPLEKEDVKCTKNLVAQLTEHEDQNRLDLDRSFEVFKKSKHPPSFH
ASDQISDMLNGGDEIYANCMVIDQVGDLDINYINLEGLTSSPCPESMGSTLGPQSYKHIL
PAESGTGIHSILGDPDVTSNTGTQPSFPSSSSSCASNSNLSFGLRGFEKEQSQLKQRSSS
LDALDADSEGEGHSELTHTCYTPMSQSSSRMGIPSGDELDSFETTPESDFSISRTESLSL
SSTLQSKESLLSGIRSRSYSCSSPKISQGKSRLVRDFTVCNSSEEQRAYSLPEPPGEKRI
QEEEWDKYIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKTKSKDAKDKEKLSRHQFVPG
TFSGVLQCLVCDKTLLGKESLQCSHCNTNVHKACKDAAPPCTKKSQEKYNKNKPQTILGN
SSFREVPQPGLSLHPSSSMPIGLPAGRKESTGQAHSLARSIPGSTLESFRKSGTSVESES
DGNSWRSRSHSDEVFQPMGSSPSTESFLMEDVVDSSLWSDLSSDAQEFEAESWSLVVDPS
FCSRQEKDVIKRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLD
ELLEIHKHFFYSMKERRQESCVDSDRNFVIDRIGDILVQQFSEENANKMKKIYGEFCSHH
KEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTK
ERTEEHRDLCNALSLIKDMIAAVDLKVNEYEKHQKWLEILSKIENKTYTKLKNGHVFRKQ
TLLSKERTLLFNGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISL
QKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEEGGRT
SESDEEKRKAEARVAKIQQCQEILSNQDQQICTYLEEKLHIYAELGELSGFQEVHLEPHL
LIRPDPGEPPQAASLLAAALKEAQSLHVAVKATQLGDPSPAPEGGCGDSVLTDLFDTHDG
PGSPPASLVTEGAEGRGCWDVDPGTQGVGTDLAVSDAGEKVENRGFPVSSQSEIIQAIQN
LTRLLYSLQAALTIQDSHIEIHKLVLQQQESLCPGPPLRAPFPDLEKRREELGDIHKLQL
QFQQDQRRWHRRCDQQQRAQEAKATWLQERERECQSQEELLLRSRGELDQQLQEYQQNLE
RLREGQRLVEKEREWMRAQQSLLGRWRHSRQSSLPAAFSPGSQEGMELNRSESFCHENIF
INDALVKTSLNTFNRPILSGVHQEVTLLPQRPNSDLVRTSENSADHLKTDLCQPSEVNPE
LWPAAESHQLSPPSHPSSQDPCKNDTETAPSDLPYHHLSNAYQPPLQTLIMEAKLDLHTR
SRQDGEAGDGAEENIVYL
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggaactgagctgcagcaaagtacctctttatggacagaccatggtccatgccacgttt
gacaaaaatgtttatcttcccaaagatgccgaattttactttatttataacggagcccat
cagcggcacattgctatcgctgagcgtgctgaggacaatgtcctgcagtcctggattcca
ggccatggatgtcaagagacagtgacggtgtctgtgtgcctctgctcagaaggttactct
ccagtaaccatgggctccagctcagtgacttatgtagacaacatggcttgcaggctggcc
cggttgctggtcactcaggctgatcgcctcactaccgggagccatcagagtctgctgaca
ccatttgctctgccagcaggagcactgcctgcattggacgaggagttggtgctggctctg
gctcatctggaattgccgcaagggtggactgtcttgggaaattcttcacttgaagtttca
ctgtacagagagtctcttctccacctagcagtgagatggggtttggctaaactttcccag
ttcctcttgtgtctgcctgggggggtgcaggccttggatttacccaatgaagagggtgcc
acaccattagacctagctgtccatggtggacactctaagctggttgaagacatcacaaac
ttccagggcccatgctctcctggcttctcccgggtacagctccgagaagatgtcttcctt
cagtacatccacgcgtcagagacactcaccctcacgctgaaccacacggctgagcatctg
ctagaggcagacattaaactcttcaggaaatacttctgggatagagcctttctcatcaag
gctcttggagaacaagaagtcaggcccaagacacagccagctatgccttccagtgctgca
gaaactgaagaagaagaagttaagaatctggaatccagcagatctcccctggaaaaggag
gatgtaaagtgtacgaaaaacctggtagctcaactgactgaacacgaagatcaaaacaga
ctagatctggatcgttcctttgaggtcttcaaaaaatccaagcaccccccatcatttcat
gcttccgaccagatttctgacatgctgaacggaggtgatgaaatctatgccaactgtatg
gttatagatcaggttggtgatttggatattaattatattaatttagagggactcactagc
agcccctgccctgaatccatgggctctactctggggcctcagagctacaagcacatcctg
cctgctgagagcggcactggcatacactccatccttggggaccctgatgtgacttctaat
actggaacccagccatccttcccctcgtcatccagctcatgtgcctccaactcgaatctt
tcttttggtcttcgtgggtttgagaaagaacaaagtcagcttaagcaaagaagttctagc
ctagatgccctggatgccgacagtgaaggagaaggacactcagaactgacacacacttgc
tacactcctatgtcccagagctcatccagaatgggaattcctagtggggatgaattggac
tcttttgagaccacccctgaatccgattttagtatctccaggactgaatcactgtctttg
tcaagcaccctccagtccaaggaatcattgctttctggaattcgttcacgttcttattcc
tgttcgtcacctaaaatctctcaaggcaaatctcggttggtgcgtgatttcacagtgtgt
aactcaagtgaagagcaaagagcttacagcttaccagagccaccaggagaaaaaagaatt
caggaagaagaatgggataagtatatcatacctgccaaatcagaatctgaaaaatacaaa
gtgagcagaactttcagcttccttatgaatagaatgaccagtcctcgaaataaatctaag
acaaaaagcaaagatgccaaagacaaagaaaaactgagtcgacatcagtttgttccggga
acattctctggagttctccagtgtttggtttgtgataagacactcctgggaaaagagtcc
cttcagtgttctcactgtaacacaaatgtccataaggcttgtaaagatgctgcacccccg
tgtaccaagaaatcccaagagaaatataacaagaacaaaccacagaccatccttggaaat
tcttcgtttagagaagtcccccagccagggctctctctgcacccatcttcctccatgccc
attggattgccagccgggaggaaggagtctacagggcaggcccattctctggccaggagc
attccaggatccaccttggaaagcttcaggaagtcagggacatctgtggaatcagagagt
gacgggaacagctggagaagcagatctcattccgatgaggtgtttcagcccatgggctct
tctccttccacagagtccttcttaatggaagatgttgtggattcttctctttggagtgac
ctcagtagtgatgcccaggagtttgaagctgaatcgtggagtcttgtggtggacccctca
ttttgtagtaggcaggaaaaggacgtcatcaaaagacaggatgtcatttttgagctaatg
caaacagaaatgcatcatatacagaccctgttcatcatgtctgagatcttcaggaaagga
atgaaagaagagctgcagcttgaccacagcactgtggataaaatcttcccctgtttagat
gagttacttgaaatccataaacatttcttctatagtatgaaggagcgaagacaggaatcc
tgtgttgacagcgacaggaattttgtcatcgatcgaattggagatattctagtacaacag
ttttcagaagaaaatgcaaataaaatgaagaaaatatatggagaattttgtagtcaccac
aaagaagccgttagcctctttaaagaacttcagcagaataaaaagtttcagaattttatt
aagctccggaacagtaatcttctggctcgtcgcagaggaattcctgaatgcattctcttg
gtcactcagcgcatcacaaaataccctgttttggtagaaagaatactgcagtacacaaag
gaaagaaccgaagagcacagagacttgtgcaatgcactttccttaattaaggacatgatc
gcagcagtggacttgaaagtcaatgagtatgagaagcatcaaaaatggcttgagattctc
agtaagattgagaacaaaacctacacgaaactcaaaaatggtcacgtgttcaggaagcag
acattgctgagcaaagaaagaacgctgctgttcaatggcctcgtttactggaaaacagcc
actggtcgtttcaaagatatcctagctctacttctaactgatgtgctgctctttctacaa
gaaaaagaccagaaatatatatttgcagctgttgatcagaagccatctgtcatttccctc
cagaagctcattgctagggaagttgcaaatgaggagagaggaatgtttctcattagtgct
tcatctgccggccctgagatgtatgaaattcacaccaattccaaggaggaacggaacaac
tggatgagacggatccagcaggcagttgaaagttgcccagaagaagaagggggaaggacg
agtgaatctgatgaagagaagcggaaagctgaagcaagagtggccaaaatccagcaatgt
caagaaatcctcagcaaccaagaccagcaaatttgcacctacttggaggagaagttgcat
atctacgcagaactgggagaactgagtggatttcaggaggtgcatctggagccccacctc
ctcattagacctgacccaggagagcctcctcaggctgcctccttactagcagcagcattg
aaggaagcccagagcctgcacgtggcagtgaaggccactcagctaggagatcccagtcca
gcacctgagggaggctgtggagactcagtcctgacagatctgtttgatactcatgatggc
cctggatcgcccccggcttcactagtcacagaaggggcagaaggaagaggctgttgggat
gtggatcccgggacccagggtgtgggaaccgacttggcggtctctgatgcaggggagaag
gtggaaaatagaggttttccagtttcttcacagtcagagattatacaagcgatacagaat
ttaacccggctcttatatagccttcaggccgccttgaccatccaggacagtcacatagag
atccacaagctggtactccagcagcaggagagcctgtgtcccggaccccctctccgagcc
cccttccctgacctggagaagcggcgggaagagttgggcgacatccacaagctccagctc
caattccagcaggaccagcgacgctggcaccgccggtgtgaccagcaacagcgggcacag
gaggccaaggccacttggctgcaggagcgcgagcgggaatgccagtcacaggaggagctg
ctgctgcggagccgtggcgagttggaccagcagctgcaggagtaccaacagaacttggag
aggctgagggagggccaacgcctggtggagaaggagcgagaatggatgcgggcccagcag
agcctgctgggccggtggagacacagccggcagagtagccttcctgcagccttctctcca
ggaagccaggagggaatggaactcaatcgatctgagagtttctgtcacgaaaatatattc
atcaatgatgcgctagtaaaaacatcacttaacactttcaacagaccaattctgtcaggt
gtccatcaggaggtcactctcctgccacagagacctaattctgatttggtcaggactagt
gaaaattcagcagaccacctcaagacggacctttgtcagccctccgaggtcaaccctgaa
ctgtggccagctgctgagtcccatcagctgtcacctccttcccacccaagcagccaggat
ccttgtaaaaatgatactgaaactgctccatcagaccttccatatcaccacctctccaat
gcataccaacctccactgcagacacttataatggaagcaaagctcgacctacacacaagg
agcaggcaggatggagaagctggagacggcgccgaagaaaatattgtttacctctaa
DBGET
integrated database retrieval system
