Suncus etruscus (white-toothed pygmy shrew): 126001576
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Entry
126001576 CDS
T09902
Symbol
PEX1
Name
(RefSeq) peroxisomal ATPase PEX1
KO
K13338
peroxin-1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
126001576 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126001576 (PEX1)
Membrane trafficking [BR:
setr04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
126001576 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
RuvB_N
nSTAND3
AAA_5
ABC_tran
RNA_helicase
AAA_28
AAA_22
AAA_33
TIP49
IstB_IS21
DUF815
Sigma54_activ_2
NPHP3_N
Rad17
AAA_7
AAA_19
Mg_chelatase
AAA_29
AAA_2
Parvo_NS1
Bac_DnaA
Vps4_C
ORC-CDC6-like
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
126001576
NCBI-ProteinID:
XP_049624818
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Position
1:96534817..96582725
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AA seq
1271 aa
AA seq
DB search
MWGSDRPAGAGEGGAAVTVTFTNARDCFLHLPRRLVSQLRLLQHQAIEVTWCQQPVFLSW
VEGRHFSELGENVAEINRQVGQKLGLSNGEQVFLRPCSHVVSCQQVEVEPISADDWEILE
LHAASLEQHLLDQIRIVFPKAIFPVWVDQHTYIFIQIVALIPTAGYGRLETDTELLIQPK
TRQAKENTFPKVDNIDGRDHKGVTKEFQFKKLQSVSGVTGSNSEVTATSSSPSLWTILGS
IFPFGSEKNYETSWGLMEINAFKNMQCSKNVPLDNIFRVCKSQPPSICNASTTSPFSKNS
AIHVFPWDQEYFDMEPSFTVTYGKLVKLLSPKQQQSRIKPNVLLPEKEKQLSEGQDQKQI
SPDPGPEADVSCVVQVIWNGLEELRNALKYTNHVEVLHLGKVWIPDDLRKKLNIEMHSVV
KISQVEIIPQIPRALKLQPRENLPQGISEENIRSVFFSWVQQSVTTTLPLVMSEEEYIKL
RIKDGLKEFCLDIVHSCGKEKEKTVFLLSTRLLQKIPLQVLLDPMVKEENDEEIDFILPF
LKLNCLGGVCAIGLSSMEHITHSLLGRPLSRQLMALMAGLRNGGLLLTGGKGCGKSTLAK
AICREAFDTLDAHVEIIDCKALRGKRLETIQKSLEAAFSEAAWRQPSVVLLDDLDLIVGL
PALPEHEHGPDTVQSQRLAYALNNILKEFISMGSLVALIATSQSQNSLHPLLVSAQGMHI
FQCTHHLQPPNQEQRCEILHHIIKSKLGCEINKFTDLNLPQIAKETEGFVTRDFTVLVDR
AVHSCLSHQSISTKEELTLTTSDFQKALQGFIPASLRNVNLHKPRDLGWDQIGGLHEVRQ
ILMDTIQLPAKYPELFTNLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPEL
LSKYIGASEQSVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDG
VESLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILKVLSVSLPLADDV
DLQHVASVTDSFTGADLKALLYNAQLEALHGRLLSCGLTDGGSSSDSDLSLSSMVFLTHS
SGSDDSAGDGECGLEQSLVSLEMSDLLPDESKFNMYRLYFGSSYESELGNGTSSDLSSQC
FSAQSSITQELSGLSGKDQLFSQPPLFRTASQDGYQELTPEQRDQLRADISIIKGRYRSQ
SGEDDSMRQPGPKASLSISQCHLMTALSHTRPSISEDDFKNFTELYENFQNPKKKNQSGT
MFRAGQKVTLA
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagcgaccgcccggctggtgctggggaaggcggggcggccgtgaccgtgacc
tttactaatgctcgggactgcttcctgcacttgccccgtcgcctcgtgagccagctgcgt
ctgctgcagcatcaagctatagaagtcacatggtgtcagcagcctgtgttcttgagctgg
gttgaaggcaggcattttagtgaactaggcgaaaatgtggctgaaattaatagacaagtt
ggacagaaacttggactctcaaatggggaacaggtgtttctcagaccatgttcccatgtg
gtatcctgtcagcaagttgaggtggaacccatctcagcggatgattgggagatcctggag
ctgcatgctgcatcccttgaacagcatcttctagaccaaattcgaatagttttccccaaa
gcaatttttcctgtttgggttgatcagcatacttatatatttatccagattgttgcacta
ataccaactgctgggtatggaagactggaaactgacactgaactcctcattcagccaaag
acccgccaagccaaagagaatacatttccaaaagtagataatatagatggaagagaccat
aaaggagtgacaaaagaatttcaattcaagaaacttcagtcagtatcaggagtgactggg
tctaattcagaggtcacagctacttcatcaagtccaagcttgtggactatactaggaagc
atttttccttttggatctgaaaagaattatgaaacttcctggggtttaatggaaatcaat
gctttcaaaaatatgcagtgttcaaaaaatgttccactagataatattttcagagtgtgc
aaatctcagccccctagtatctgtaatgcttcaacaacatctccatttagcaaaaattct
gccattcatgtttttccatgggaccaggaatactttgatatggagcccagctttactgtg
acttatggaaaactagttaagctactttctccaaagcaacagcagagcagaataaagcca
aatgtgctgcttcctgaaaaagagaagcaactatcagaagggcaagatcaaaagcaaata
agcccagaccctggtccagaagctgatgtgtcctgtgtagtacaggtcatctggaatgga
ctcgaagaactgaggaatgccctaaaatacaccaaccacgtagaggttctccatcttgga
aaagtctggattccagatgacctgagaaagaaattaaatattgaaatgcattcagtagta
aaaatatctcaagtggaaatcattccccaaattccaagagctctaaaactgcaacctaga
gaaaacttacctcaaggtataagtgaagagaacataagatctgtgttcttttcatgggta
cagcagtctgtgactaccacgcttcctttagtaatgtcagaggaagaatacattaaactg
agaattaaagatgggttgaaggagttttgtctggatatagttcattcttgtggaaaagaa
aaagaaaaaacagttttcctgttaagtaccagacttctgcaaaagatcccgttacaagtc
cttctagatcctatggtaaaagaagaaaatgatgaggaaattgactttattcttcctttt
ttaaagctgaactgcttgggaggtgtgtgtgctataggcctctcctccatggagcacatc
actcatagccttctggggcgccctctctcacggcagctcatggccctcatggcaggactc
aggaatggaggccttttactcacaggaggaaagggatgtggaaaatcaacattagccaaa
gcaatctgtagagaagcatttgatacattggatgcccatgtggagataattgactgtaaa
gctctacgagggaaaagactggaaaccatacaaaaatctctagaggcagctttctcagag
gctgcatggagacagccttctgttgttctgctggatgatctggaccttattgtgggcctc
cctgcacttcctgaacatgaacatgggcctgacactgtgcagagccaacgacttgcatat
gctttaaacaatatactaaaagaatttatttcaatgggaagtttggttgcacttattgct
acaagccagtctcagaattctctgcatccattacttgtgtccgctcaaggaatgcatata
tttcaatgcactcaccatctccagcctcctaatcaggagcaaagatgtgaaattttgcat
cacataataaaatctaaactgggttgtgaaataaacaagttcactgatcttaacctgccc
cagatagctaaggaaacagaagggtttgtgaccagagattttactgtgcttgtggatcga
gctgtacattcttgtctctctcatcagagtatatccacgaaagaggaattaactttaacc
acctcagatttccaaaaagctctccaaggatttattcctgcatctctacgaaatgttaac
ctgcataaacctagggacctgggttgggatcagattggtggattgcatgaagtgcggcag
atactcatggatactatccagttaccagccaagtatccagaattattcacaaacttgcct
atacgacagagaacaggagtgttgttgtatggacctcctggaacaggaaaaaccttacta
gctggggtaattgcacgagagagtggaatgaactttattagtgtcaaggggccagagtta
ctcagcaaatacattggagcaagtgaacaatctgttcgggacatttttattagggcacaa
gctgcaaagccctgcattcttttctttgatgaatttgaatccatcgctcctcggcgaggc
catgataacacaggagtcactgatcgtgttgtcaatcaactgctgactcagctggatgga
gtagaaagcttacagggtgtttatgtcttggctgctactagtcgccctgatttaattgac
cctgccctgctcaggcctggccggctggataagtgtgtttactgtcctcctcctgaccag
gtgtcccgtctggaaattctaaaagttctgagtgtctctctacctctggcagatgatgtg
gaccttcagcatgtggcatcagtcactgactcctttacaggggcggatctgaaagctttg
ctgtacaatgcccagttagaggccttgcatggcaggctactgtcctgtggactcacagat
ggtggttccagctctgacagtgacctgagtttgtcctcaatggtttttctgacacacagc
agtggctctgatgattcagctggagatggagaatgtggcttagagcaatcacttgtttct
ctagaaatgtctgatttgttgccagatgaatccaaattcaacatgtaccggctttacttt
ggaagctcatatgaatcagaacttggaaatggaacctcctctgatttgagctcacagtgc
ttttctgcacaaagctccataactcaggagttgtctggactttctggcaaagatcagctg
ttttcacagcctccattatttagaacagcctcacaagatggttaccaggaacttacacca
gaacaaagagatcaacttagagctgatatcagtattatcaaaggcagataccggagccaa
agtggagaggatgactccatgaggcaaccaggaccaaaagccagtctgagtattagtcag
tgtcatttaatgactgcactcagtcacacaagaccatccatcagtgaagatgactttaag
aattttactgagttgtatgaaaactttcaaaatccaaagaagaaaaatcaaagtggcaca
atgtttcgagctggacagaaagtaactttagcataa
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