Suncus etruscus (white-toothed pygmy shrew): 126001693
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Entry
126001693 CDS
T09902
Symbol
TTC6
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 6
KO
K24929
tetratricopeptide repeat protein 6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
setr04990
]
126001693 (TTC6)
Domain-containing proteins not elsewhere classified [BR:
setr04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
126001693 (TTC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_17
TPR_11
TPR_8
TPR_9
TPR_12
TPR_16
TPR_19
ARM_TT21_N
DUF5693
NatA_aux_su
DSRB
EF_TS
Rabaptin
Motif
Other DBs
NCBI-GeneID:
126001693
NCBI-ProteinID:
XP_049624909
LinkDB
All DBs
Position
2:complement(50943497..51165098)
Genome browser
AA seq
1819 aa
AA seq
DB search
MDKEQPGEQRGTPQAPPEKSPGSDQASLQQEDPSEQPSLSSQPTVTEHAAPFSPREFYLR
SSAFRRYQRQRQPLAISSGAGTSRSLLLTSPPLRRWRPWDPSVAPKPPKKPESPPPKLLK
PLEGPRGRRYTGKQELLFLQEFPVGPKRHSSSISSMDSDLTSILLQRQVLSHFPRWSSTP
SVEPIGDRSLSFLRTESQMGSSQEHRPSARASSLVMPTSVEEVIASLHSEAQLAADRHFK
ELVRSILGPTCDLESDVEGLLLATVLPLIADILLPVSAEVAGFMLGKQHVSEEMHAARSS
SFQIEPEDILDLGVSDTESMTKFQETLEIVPVSELSKPLESEPPAGDSKAAKRIFLKISI
MHLWKTPNEDFVERIMVKIPGEYTLPTLHALCRTVPTQHLPFNLSLASRIYHTPNRKGHN
TLVGQLGASLFDSSLEEDDQKDSLLYGIRNIESEEEKTAVLTISPVQPPKMSKRTRKYAH
KPQLQLLGEEMSAYPVPTKFLWTSAAPKFSVPVSIIKDTVYPKYESAQASRILLEKFSIF
KKQHIISSHALSRNNFWHFILKKSASFENIPKHYRTEFPQLQRAKSAINLRKEEETTVSL
NIKNDMQSNIKEVLLQRAKELERYKAIQIESDKTVKENIDTILDRMQEKLKTRNLSVSLI
EASRQAGISYIVYPRKIKKKITSIRFNKTAIVFDELTRPPKILKRSTSHDILPGQKKLLF
RIPVYERQIRSPSLPTVLNFDEFVKKKGGKPKILGLRSWIFKLFSKYKIQKEVPKITKII
PSKEYTPVVKKLPNLELSDSLESDLSPEVIKHYTSEVEQLTEEINNKTKYLAFSYCRRGA
IYRKLGKLQSAMNDLEEAILLEPLFLNAYWHRHFIYLFQDKVKEALDDLNYINKHNKNNA
EVYLSKAEIFKANNEITLAILNYTQAIKCKPTDADIYFRRGELYEMENRVLAIDDFSKCI
FYDSKRTDALMKRGLFHFENEMWMQATQDFTDLLNVNPQDSQARTFRGRVYYNRHLFTQA
AEDFSFAIHLDPNNWLALYYRACLFRKTNPLRALQDYSVSALINDGYENLNCFLHRGILY
ADLHFWMLAICDFETIISLERTFVVAYINIGLIYLLHLDNYFEAIWNFSEVIKIDPLHIQ
SYVCRAKAYDKLHRLPKSVKEITRAIHLQPDEVELYIIRGQYLLRMKNLDLAKLTIKQVI
EMNTDILELSPIQQALVYSFCDKHDKAIQVLDGITLQKPEITTYTLLAKTQMKARRNKVN
VLXHLMNYFPHSSKGPDAIAASADCLYHLGICYVEEGNFQMVFFNFTQVVKAKPDFAEGF
YQRGLCKVKLGKTFQFWIFNRAITLDSNHYQIKLISNRKIEIHLRTVQYMVLMLLCIFSR
AAYYGMKGRYSKAILNCNEAIKICPQSVFPYIYRGVLKFYNRTYNLAIIDLTIAIRKDGN
NYIAIYNRAICYTPDQALLDYGTCPFFLMLEKPVQLNTFINRGRVYTELGQYQFLIRDFA
SLCKRQDVNLYHATAMCHHRVKEFEEAVNFFNKTLXLNPHFIDAYIGRGNSYLEYGNDKA
TKQAQKDLLEHCIFSQLKHKSQNFFCLLFTGPKKNSRKPWNHFTIAIEIDPKCYKAFEGR
AVVCLQXGDYFAAIQDINIAIKINTPAEYLTNRGVIHEFMGQQQNAMKDDIKLAISLIPQ
YSLAYFNAGNIYFTTQQFSQACNYFSKALHFDPENECAALNRAIVNTLLKKYKEAKEDFA
HIAKICPLWSAVYFNRAHLYCCLKQFVLAEEDYNKALTLKPNDPIIYHLRAEVRGKLGHI
KEAIADYNKALDLRDYALS
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagagcaaccgggggagcagaggggtactccccaagctcccccggagaaatcg
cctgggtccgatcaggcgtccctccagcaagaggaccccagcgagcagccctccctctcg
agtcagccgacagtgaccgagcatgccgctcccttcagcccccgggaattctacctgcgc
agctccgcgttccgccgctaccagcgccagcggcagccgctcgccatttccagcggggcc
ggcacgtcgcggtcgctgctgttgacttcgccgcccctgcggcgctggaggccgtgggac
ccgtcggtggcgcccaagccccccaagaagcccgagtccccgccgcctaagctcttgaag
cccttggaggggccgcggggccggcggtacacgggcaaacaggagctgctgttcctgcag
gagttccccgtgggccccaagaggcacagcagctccatctccagtatggacagcgacctg
accagcatcctcctgcagaggcaagtgctctcccactttccgcgctggtcctcgaccccc
tcggtggagcccattggggaccggagcttgtccttcctccgaacagagtcccagatgggc
agctcgcaggaacatcggccttcggcccgggcatccagcctggtgatgcccacgtcggtg
gaagaggtcatcgcctccttgcactccgaggcccagctggctgctgaccggcacttcaag
gagctcgttcggagcattctgggtcccacctgtgacttggaatcagatgtagaagggctt
ttgctggcaactgtcttgcctcttattgctgacatcctgcttcctgtctctgctgaggta
gctgggtttatgttaggcaaacagcatgtgtctgaagaaatgcatgctgctcgatcaagt
agtttccagattgaaccagaggatatactagacctgggtgtctcagatacagaaagcatg
acaaaatttcaggaaactttggaaattgtgccagtaagtgaattaagcaaacctttggaa
agtgaaccgcctgcaggtgattcaaaagcagccaagagaatctttttaaagatttcaata
atgcacttatggaagactcccaatgaggattttgtagaaagaattatggtcaaaattcca
ggagaatacactcttcctacccttcatgcactgtgtagaactgtcccaacccagcatttg
ccctttaacttgagtttggcttctcgaatatatcacacacctaacaggaaaggccataat
actttggttggacaacttggagcctctctttttgatagctcccttgaagaggacgaccaa
aaagatagcttactgtatggaattcgtaatatagaaagtgaagaagaaaaaactgctgtc
cttacaatttcaccagtgcaaccacctaaaatgtcaaagagaacaagaaagtatgctcat
aaaccacaattacaactcttgggagaagaaatgtctgcttatccagtacctacaaagttt
ctttggacttcagcagcacccaaattctctgttccagtatctatcattaaggataccgtc
tatccaaaatatgagagtgctcaagcaagcagaattttacttgagaaattttccattttt
aagaagcagcatatcatttcttcacatgccctttccaggaataatttttggcattttatc
ctaaagaaatctgcatcatttgaaaatatcccaaaacattacagaactgaattcccacaa
ctacagagagcaaaatctgcaattaacttaaggaaggaggaggagaccactgtttcactt
aatatcaagaatgacatgcaaagcaatataaaagaggtgttacttcagagagctaaggaa
ttggagcgttataaagcaatacagatcgaaagtgacaaaaccgtgaaagaaaatatagat
accatcttagatcgcatgcaggaaaaactcaagacaagaaatttgtctgtatctctaatt
gaagcatctagacaagctggcatttcttatattgtttatcccaggaaaattaaaaaaaag
attacaagtataagattcaataaaacagcaatcgtgtttgacgaattaaccaggccgcca
aaaatacttaaaagatcaacatctcatgatattcttcctggacagaagaaattattgttt
agaattccagtatatgaacgtcaaattcggagtcccagcctaccaactgttttaaatttt
gatgaatttgtcaaaaagaagggaggaaagccaaagattcttggccttcggtcatggatt
tttaagttgttctctaaatataaaattcagaaagaagtccccaaaataactaaaataatt
ccttccaaagaatatactccagtagtgaaaaaactaccaaacttggaactgagtgattct
ttggagtctgatctttctccagaggtcattaaacactatacttctgaagtagagcaactg
actgaagaaataaataataagacaaaatatcttgcattttcgtattgtagacgaggagct
atttataggaaactaggaaagttacaaagtgccatgaatgatctagaagaagctatactc
ttggaaccattgtttctcaatgcctattggcatcgacatttcatttatcttttccaagat
aaagttaaagaagctttggatgacttaaattatataaacaaacataataagaataatgca
gaggtctatttgtctaaggcagaaattttcaaagcaaacaatgagattactttggcaatt
ctaaactatactcaggcaattaaatgcaagcccacagacgctgatatttatttcaggaga
ggtgaattgtatgaaatggaaaacagagtgttagccattgatgatttttccaagtgtatc
ttttatgattccaaaagaactgatgcattaatgaaacgtgggctatttcactttgaaaat
gaaatgtggatgcaagccacacaagattttactgacttgttaaatgtgaatcctcaagat
tctcaagcaaggacattcagggggagagtatattataatcggcacttatttactcaagca
gctgaagatttttcttttgcaattcacttagatccaaataactggttagcactgtattat
agagcctgtttatttcgaaagacaaaccctttgagagcactacaagattatagtgtttca
gctctcataaatgatggctatgagaatctaaattgttttctacatcggggcatactctat
gcagatctacatttttggatgctggctatctgtgactttgaaaccattatttctcttgaa
agaacttttgttgtggcttatattaatattggtctcatatatttgttgcacctggataat
tactttgaagctatttggaatttttctgaggtcattaaaattgatcctttacatattcag
agctatgtttgtcgagcaaaagcctatgacaagttgcatagattgcccaagtctgtaaaa
gagattactcgtgctatccaccttcagccggatgaagttgaactatatataataagagga
caatatcttcttaggatgaaaaatttggatcttgcaaagcttactattaaacaagtaata
gaaatgaacacagatatcctagagttaagtcccatacagcaagcactagtttattcattt
tgtgacaaacatgacaaggccattcaggtattggatggaattactttgcagaagcctgag
ataactacatatactttattagcaaaaactcaaatgaaggccaggagaaataaggtgaat
gtcttgtaacatttaatgaactattttcctcattccagtaaaggaccagatgccattgca
gcttcagcagactgtttgtatcatttgggtatttgttatgtggaagaaggcaattttcaa
atggtattttttaattttacacaagttgtgaaagcaaaacctgatttcgccgaaggcttt
tatcaacgtgggctttgtaaagtgaaactcggcaagactttccaattctggatttttaat
cgtgcaattactttggattcaaatcattaccagattaaattaatttctaacaggaagata
gagatacacttacgaactgttcagtacatggtgttaatgcttttatgcatatttagtcga
gcagcctactatggaatgaaaggaagatattcaaaagcaattttaaattgtaatgaggcc
attaaaatttgtcctcagagtgtgtttccctatatctacagaggagttctgaaattctac
aacaggacttataatttagctattattgatttaactatagctataagaaaggatggcaat
aattatatagcaatttataatagagcaatttgttacaccccagatcaagcattactagat
tatggaacctgtcccttcttcttgatgctggagaaacccgtacaattaaacactttcatt
aatcgagggcgtgtctacacagaattagggcagtaccaatttttaatacgtgattttgct
tctttatgcaaaagacaggatgtgaacctttatcatgccactgccatgtgccatcacaga
gttaaagaatttgaagaagctgtcaatttcttcaacaagacacttnaattgaatccacat
tttattgatgcttacattggacggggaaattcctatttggaatatggtaatgacaaagcc
actaagcaagctcagaaagacttattagagcattgcattttttcccagctcaaacacaag
agccagaatttcttttgcctattatttacaggccccaagaaaaattccagaaagccctgg
aaccactttactattgccatagaaatagatccaaaatgctacaaagcctttgaaggaaga
gctgtggtctgtcttcagnatggtgattactttgctgcaattcaggatattaacattgcc
ataaagatcaatactcctgcagaatacttaacaaatcgtggtgtgattcatgagtttatg
ggtcaacaacagaatgcaatgaaagacgatatcaagctggcaatttctctaataccccaa
tactccctggcttactttaatgcaggaaacatctactttacaacacagcagttttcccag
gcctgtaattacttctcaaaagcattacactttgatccagaaaatgaatgtgctgccttg
aatcgagccattgtaaacactctattaaagaaatataaagaagcaaaagaagattttgca
catatagctaaaatctgtcccttatggtccgctgtgtattttaatagagcacatttgtat
tgttgtttaaagcaatttgtattagcagaagaagactacaataaagctctgactttgaag
ccaaatgaccctataatatatcatcttagagcagaagttcgaggtaaattaggccatatt
aaggaagctatagctgactacaacaaagcacttgatcttcgagattatgctttaagttaa
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