Suncus etruscus (white-toothed pygmy shrew): 126001979
Help
Entry
126001979 CDS
T09902
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein
KO
K12600
superkiller protein 3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126001979 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126001979 (SKIC3)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
126001979 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_17
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_11
TPR_12
ANAPC3
TPR_15
TPR_9
TPR_6
Sel1
ARM_TT21_C
Sey1_3HB
TPR_20
TPR_5
TPR_30
ARM_TT21_2nd
Fis1_TPR_C
BTAD
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
126001979
NCBI-ProteinID:
XP_049625130
LinkDB
All DBs
Position
2:complement(151828689..151902816)
Genome browser
AA seq
1564 aa
AA seq
DB search
MSSKEVKTALKSAREAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNQINAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKNHVKVGQTWHKLIKIRQEEGADNQELHQLWRKLTQLLAESTEDQNNEAQQ
LLLSAFENALVSSDKIPSEDHQVLYSQFIQCLSKFPHETARLKKACEEMIKIYPTVQYPL
EVLCLHLIDSGNLTDEGYQYCCRLVEMNSKSGPGLIGLGVKAFQDKNYEDAVRNLAEGLK
ECPLCIAAWYHQAEAQVKMHRLKEAILSCNQVLKNIDNLDMSGGRLHHKNLCLRVKAEAL
IKLSDCESSEEAICTLDQVSDANNIPGLLVLKSLAYLNTGSLDEASKIMEDLLSSYPDLA
EVCALEAFFHFTRKDYLQAEICFQRALEKDAEVAEYHYQLGLTYWSMGEETRKDKSKALT
HFLKAAKLDPYMGKVFCYIGHYYRDVVGDKNRARGCYRKAFELNDTDTESGAAAVDLSIE
LEEMETALAILTAVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESIYSVFKVAAIQQILGKYKEAIAQYHLIIK
KKEDYVPALKGLGECHLMMAKVALADYLDGKAVDYIEKALEYFTWALQHRADASCLWKLV
GDACTSLHVVSLAKVNVNVLGILLGQKEGKQILKKTELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQVQHLAESGSNMNDLNELMEKSIHCLKKAVRLDSNNHLYWNALGVVSCYSGI
KNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANDNIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVASYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYQYSILQMN
AIPAAQVVLSKYTERIQNYAPAFTMLGYLNENLQLKKEAAAAYQKAMLLLQTSEDRDMYN
VAVRNYGRLLCASGEYDKAIQAFKSIPLEELEDIIGFALALFMKGLYKESSQAYERALSV
VESERDKAHILTALAITEYKQGKMDAAKTLLFKCSILKEPTTESLQTLCALGLAVQDATL
SKAALNELLKHKKEKDIDYQQCLLTSAIYALQGCRVAVQRQVSKAVHSNPANPALWSLLS
RVVAQYPQQNAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAVGNSSAFGGKNTALKTIQ
KVALLSPGDPAVWAGLMAACYADDKLALMNKTQPKRMDLHLTLLSAVSASIKDKEFLENY
NQTLEKWSLSQAVTSLIDTKRISEAEALCTKNLISNPDQPTVRLLLRQVQCKALLDSQKP
LPDAVLEELQKTVLTNSTSVPAWQWLAYIYQSQGMMSAAEMCYRKSLQVASQQGSWCGKL
SSLLRLALLALEVCMANISSDHWPSLVQEATTEALKLCFCPLAILVQALLQFNRKMGARE
TRRLLERVVYQPGYPKSVVSTARWYLLRHLHAKNDCELIDVLVNNAKIHGDTRALDLNKK
LSSQ
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtaaggaagtgaagactgctctaaaaagtgctagagaagcaatcagaaataaa
gaatacaaagaagcactgaaacattgtaagacagtgttaaaacaggagaaaaataactat
aatgcctgggttttcattggtgttgctgcagctgaactggaacaacctgatcaggcccag
ggtgcctataagaaagctgctgagctagagccagaccaattactggcttggcaggggtta
gcaagtttgtatgagaaatgtaatcaaataaatgcgaaggatgatttacctggtgtttac
caaaagctcctggatctttatgaaagtgttgacaagcagaagtggtgtgatgtctgtaag
aaacttgtggatctgtactaccaagaaaagaatcatgtaaaggtgggccagacatggcac
aaattgataaagatacggcaggaagaaggtgcagacaaccaagagcttcatcagttgtgg
aggaaactaactcagttgttggcagagagtaccgaggaccagaataatgaggctcagcaa
ttgcttttatctgcctttgagaatgcactggtatcatcagataagattcctagtgaagat
caccaagtactctatagccagttcattcagtgtttatccaaatttcctcatgagactgct
cggttgaagaaggcttgtgaagaaatgataaaaatttatcccaccgtacaatatccatta
gaagtgctttgtctgcatttaatagattcaggaaatcttacagatgagggatatcagtac
tgttgcagactagtggaaatgaattcaaaaagtggtccaggtctaattggtttaggtgtc
aaagcatttcaagacaaaaactatgaagatgctgttaggaacttagcagaaggattaaag
gaatgtcctctgtgcatagctgcatggtatcatcaagcagaagcccaagtcaaaatgcac
agacttaaagaagctattctttcatgcaatcaagttctaaagaacatagataatcttgat
atgtctggtggccgtcttcatcacaagaatctttgtctgcgtgtgaaagctgaggctttg
attaaactctctgactgtgaatcttcagaagaagcaatttgtactcttgatcaggtttct
gatgcaaataatattcctggacttttggttctaaagagcttggcctatttgaacacaggc
tccttagatgaagcttcaaagattatggaagatctcctttcttcttaccctgacctagct
gaagtttgtgccctggaggctttttttcattttacgagaaaggactatctacaagcagaa
atatgtttccagagagctcttgagaaagatgccgaagttgcagaatatcattaccaactt
ggattaacttattggtctatgggtgaagaaacaagaaaagataagtcaaaggctcttaca
cactttcttaaggctgccaagttggacccatacatgggcaaagttttttgctatataggc
cactattacagagatgtagttggagataaaaacagagcccgtggatgttacagaaaagct
ttcgaattaaatgacactgataccgaatctggagctgcagcagttgacttaagtatagaa
ctggaagagatggaaactgctttggctatcctaacagctgtaactcaaaaggccagtgct
ggaacagcaaagtgggcctggctcaggcgaggattatactatttgaaggctggtcagcat
tctcaagcagtggctgatttgcaggcagcattaagagcagacccaaaggacttcaattgc
tgggaatcattaggagaggcgtacttgagcagaggtggttatacaacagccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccatatatagtgtgttcaaggttgcagcg
atacagcagatcctaggcaaatacaaagaagctatagctcagtaccatctgatcattaaa
aagaaagaggattatgtacctgctttgaaaggtttgggtgaatgccatctcatgatggca
aaagtagctttagcagactatcttgatggcaaagcagttgactacatagagaaagcactg
gaatattttacttgggctctacaacatcgagctgatgcatcttgcctttggaagcttgtt
ggagatgcttgcactagtctgcatgttgtctcactagctaaagtgaatgttaatgttttg
ggaatccttctaggtcagaaagaaggaaaacaaatattaaagaaaacagagctccttcat
cttggaggaaggtgttatggtcgtgctttaaaattgatgtcaacatcaaatacgtggtgt
gatcttggaattaattattatcgccaagtacaacatctagcagaatcaggcagtaacatg
aatgatctcaatgagttgatggagaaatctatacattgtctgaaaaaggcagtcaggctt
gacagtaataatcacttgtactggaatgctcttggcgtggtatcatgttatagtggaatt
aaaaattatgcccttgctcagcactgtttcatcaaatcaattcagtcagaacaaattaat
gctgtggcatggaccaacttgggagtgttatatcttgcaaatgacaacattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttatttaatgtgctggattgga
caggctcttattgcagaaacagttgcaagttatgacactatggacctcttcaggcacact
acagaactcagtatgcatacggagggtgcaataggttatgcctattgggtctgtacaaca
ctgcaagataaaagcaacagagagactgaattgtaccagtacagcatactacagatgaat
gctatcccagcagcacaagttgttttgagtaaatacacagagagaattcaaaattatgct
ccagctttcacaatgttgggttacttaaatgagaatctacagctgaaaaaggaggcagct
gctgcatatcaaaaggcaatgttgttgttgcagacttctgaagacagagatatgtataat
gttgcagtaagaaattatggtagactgttatgtgccagtggtgaatatgataaagctatt
caggcctttaagtcaataccccttgaagagttggaagacatcataggttttgcgctggca
ttatttatgaagggtttatataaagaaagcagccaagcttatgagagagccttgtctgtt
gttgaatcggagcgagacaaagcccatatattgacagctctggcaataacagaatataaa
caagggaaaatggatgcagctaagacattactatttaaatgttctattttaaaggagccc
accacagaaagccttcagaccctgtgtgctttgggattggcagtgcaagatgctaccctt
tccaaagctgcccttaatgagttactgaagcacaagaaagagaaagacattgattaccag
cagtgccttcttacctcagcgatttatgcgctgcaaggctgcagagtggctgtgcagaga
caagtatctaaagccgtccacagtaacccagccaatcctgctctttggtctcttttgtcc
cgagtggttgctcaatatccccaacaaaatgcaaaaggaggtgctgtcgcagggaatgtg
gctcatattctggactcaaatcacggaaagaaagcattactatacaccgcagtaaatcag
ttggctgtgggaaacagttcagcatttggtgggaagaatactgcactaaagaccattcag
aaggtagcgctcctttctccaggtgacccagctgtgtgggctggactaatggcggcctgt
tatgctgatgataaactggctctaatgaataaaactcaaccaaagaggatggatttacac
ttgacactgttgtctgctgtttctgcatcaattaaagacaaagaattccttgaaaattac
aaccaaactcttgaaaagtggtctctttctcaagctgtcactagtctgatagatacaaaa
agaatatctgaagctgaagccctctgcacaaagaacttaatcagtaacccggatcagcca
actgttaggttgcttttaagacaagtgcagtgcaaagcactcctggactcacaaaagccc
ctcccggatgctgtccttgaagaactgcagaaaacagtcctgacaaattcaacctctgtt
ccagcttggcagtggctggcatacatatatcaatcccaaggaatgatgagtgctgcagag
atgtgttacagaaagagcctgcaagttgcatcgcagcagggtagctggtgtgggaagctc
tcaagtctgttgagattagcactgcttgcattagaagtatgcatggctaatatttccagt
gatcactggccatccttagttcaagaagctacaactgaggccttaaaactttgcttttgt
cctctcgctatccttgtacaagctttattgcagttcaatcgcaaaatgggagcaagagag
acacggcgacttttggagagagtggtgtatcagccagggtaccccaaatctgttgtatca
actgcacgttggtatttactgagacacttacatgccaaaaatgactgcgagcttattgat
gtgctggtaaacaatgccaaaatacacggagatacaagagctttggatctgaataagaaa
ttgtcctcacaataa
DBGET
integrated database retrieval system
