Suncus etruscus (white-toothed pygmy shrew): 126002012
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Entry
126002012 CDS
T09902
Symbol
ABCB9
Name
(RefSeq) ABC-type oligopeptide transporter ABCB9
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr02010
ABC transporters
setr04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126002012 (ABCB9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
126002012 (ABCB9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126002012 (ABCB9)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
126002012 (ABCB9)
Membrane trafficking [BR:
setr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
126002012 (ABCB9)
Transporters [BR:
setr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
126002012 (ABCB9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
RsgA_GTPase
AAA_16
nSTAND1
AAA_29
AAA_21
DUF4191
AAA_23
Motif
Other DBs
NCBI-GeneID:
126002012
NCBI-ProteinID:
XP_049625170
LinkDB
All DBs
Position
2:complement(2556753..2574015)
Genome browser
AA seq
762 aa
AA seq
DB search
MQLWKAVVVTLAFMSVDVAVTTAIYLLSHPDRSLLEDIRHFNVFDSVLDLWAACLYRSCL
LLGATIGVAKNSALGPRRLRASRAVIALVCLFVGVYAMVKLLLFSEVRRPVRDPWFWALF
VWTYVSLAASFLLWRLLATVRPHAKALERGAGAEAEAFPTEGQALPEQASGATLQKLLSY
TKPDVAFLVAASFFLIVAALGETFLPYYTGRAIDGIVIQKSMEQFSTAVLGMCLLAVGSS
FAAGIRGGIFTLIFARLNIRLRNRLFRSLVAQETSFFDENRTGDLISRLTSDTTMVSDLV
SQNINIFLRNTVKVTGVVVFMFSLSWQLSLVTFMGFPIIMMVSDTYGKYYKRLSKEVQSA
LARASSTAEETISAMKTVRSFANEDQEAEAFSRRLQQVYALNRKEAAAYTCYVWGSGLTL
LVVQVSILYYGGHLVISGQMSSGNLISFIIYEFVLGDCMESVGSVYSGLMQGVGAAEKVF
EFIDRQPTMVHDGDLAPDHLEGRVDFEDVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGP
SGSGKSSCVNILENFYPLEGGRVLLDGKPISAYDHKYLHRVISLVSQEPVLFARSITDNI
SYGLPAVPFEMVVEAAQKANAHGFIMELQDGYNTETGEKGAQLSGGQKQRVAMARALVRN
PSVLILDEATSALDAESEYLIQQAIHGNLQRHTVLIVAHRLSTVERAHLIVVLDKGRVVQ
QGTHQQLLAQGGLYAKLVQRQILSLEPTAGYQEMPGSGGPKA
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgtggaaggcggtggtggtgaccttggccttcatgagcgtggacgtcgcagtg
accacggccatctacctactcagccaccccgaccgcagcctgctggaggacatccgccac
ttcaacgtcttcgactctgtgttggacctgtgggccgcctgcctgtaccgcagctgcctg
ctgctgggcgcaaccatcggggtggccaagaacagtgccctgggccctcggcgactgcgg
gcatcacgggccgtcatcgccctggtgtgcctctttgtgggtgtctatgccatggtcaag
ctgctgctcttctctgaggtgcgccggcccgtgagggacccctggttctgggccctcttc
gtctggacctacgtgtcgctggctgcctccttcctgctttggaggctgctggccacggtg
cggccacatgccaaggcactggagcggggtgcgggtgccgaggctgaggccttccctacg
gagggccaggccctgcctgagcaggcgtcaggggccactctgcagaagctgctgtcttac
accaagcctgatgtggccttcctcgtggctgcctccttcttcctcatagtggccgctctg
ggggagactttcctcccctactacacaggccgtgccatcgacggcatcgtcatccagaag
agcatggagcagttcagcacggccgtcctgggcatgtgccttctggcagttggcagctcg
tttgccgcaggtattcggggcggcatttttaccctcatatttgccagactgaacattcgc
ctgcgaaaccggctcttccgctcactggtggcccaggaaaccagcttctttgatgaaaac
cgaacaggtgacctcatctcccgcctcacctcggacaccaccatggtgagtgacctggta
tcccaaaacatcaacatcttcctgcggaacacggtcaaggtgacgggcgtggtggtcttc
atgttcagcctgtcctggcaactctccttggtcaccttcatgggcttccccatcatcatg
atggtgtccgacacctacggcaagtactacaagagactctccaaggaggtgcagagcgcg
ctggcccgggccagctccacggccgaggagaccatcagcgccatgaagacggtgcgcagc
ttcgccaacgaggaccaggaggccgaggccttctcacggcggctgcagcaggtttatgcg
ctcaatcgcaaggaggcggccgcctatacctgctacgtctggggcagtgggctcacgctg
ctggtggtccaggtgagcatcctctactacgggggacatctggtcatctcaggccagatg
agcagcgggaaccttatctccttcatcatctacgagttcgtgctgggggactgcatggag
tccgtgggctccgtgtacagcggcctcatgcaaggggtgggagcggccgagaaggttttc
gaattcatcgaccggcagcccaccatggtgcacgatggggacttggcccccgaccacctg
gaaggccgagtggactttgaggatgtgaccttcacctaccgcacccggccccacacccaa
gtgctgcagaatgtgtcgttcagcttgtccccggggaaggtgacagctcttgtggggccg
tcgggcagtggcaagagttcgtgtgtcaacatcttggagaacttctacccgctggagggc
ggccgtgtgctgctggacgggaagcccatcagcgcctatgaccacaaatacctgcaccga
gtgatctccctggtgagccaggagccagtgctgttcgcccgctcgatcacggacaacatc
tcctatgggctgcccgctgtgccctttgagatggtggtggaggccgcacagaaggccaat
gcacatggcttcatcatggagctgcaagacggctacaacacagagacgggtgagaagggg
gcacagctgtcaggcgggcagaagcaacgtgtggccatggcgcgggctctggtacggaac
ccgtctgtcctcatcctggatgaagccaccagtgcactggatgctgagagcgagtacctg
atccagcaagccatccacggcaacctgcagagacacactgtgctgatcgtggctcaccgg
ctgagcaccgtggagcgagcacacctcattgtggtgctggacaagggtcgtgtggtgcag
cagggcacacaccagcagctgctggcccagggcggcctctacgccaagctggtgcagcgg
cagatcctgtcactcgaacccacggccggataccaggaaatgccaggcagtggaggcccc
aaggcctga
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