Suncus etruscus (white-toothed pygmy shrew): 126002021
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Entry
126002021 CDS
T09902
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03272
Virion - Hepatitis viruses
setr04145
Phagosome
setr04913
Ovarian steroidogenesis
setr04925
Aldosterone synthesis and secretion
setr04927
Cortisol synthesis and secretion
setr04934
Cushing syndrome
setr04975
Fat digestion and absorption
setr04976
Bile secretion
setr04977
Vitamin digestion and absorption
setr04979
Cholesterol metabolism
setr05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
126002021 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
126002021 (SCARB1)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
126002021 (SCARB1)
04925 Aldosterone synthesis and secretion
126002021 (SCARB1)
04927 Cortisol synthesis and secretion
126002021 (SCARB1)
09154 Digestive system
04976 Bile secretion
126002021 (SCARB1)
04975 Fat digestion and absorption
126002021 (SCARB1)
04979 Cholesterol metabolism
126002021 (SCARB1)
04977 Vitamin digestion and absorption
126002021 (SCARB1)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
126002021 (SCARB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
126002021 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126002021 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
setr04147
]
126002021 (SCARB1)
Membrane trafficking [BR:
setr04131
]
Endocytosis
Phagocytosis
Scavenger receptors
126002021 (SCARB1)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126002021 (SCARB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
Glyco_hydro_1
Motif
Other DBs
NCBI-GeneID:
126002021
NCBI-ProteinID:
XP_049625179
LinkDB
All DBs
Position
2:complement(3290880..3331507)
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AA seq
509 aa
AA seq
DB search
MGSRVRARRAAAGLGCFGLLLAALGGVMIAFVPSLIKQQILKNVRIDPNSLSFGMWKEIP
VPFYMSVYFFNVLNPQEVLQGQKPSVQEMGPYVYREFRHKINITFNDNDTVSFLEHRSFQ
FQPERSRGSEDDYVVMPNILVNSAAAMMEDKPMGLKLMMTLAFSSMQEHAFMNRTVRDIM
WGYDDPLVNLINKYFPGVLPFKGKFGLFSELNNSDSGLFTVFTGVQDFSRIHLVDKWNGL
SKVNYWHSDQCNMINGTSGQMWAPFMTPESSLEFYSPEACRSMKLIFKERGHFEGIPTYR
FVAPKTLFANGSVYPPNEGFCPCRQSGIQNVSACRFSAPLFLSHPHFYNADPVLAESVIG
LHPNEEEHSLFLDIHPVTGIPMNCSVKLQLSLFMKEVRGIGQTGKIKPVVLPLMWFGESG
AMEGTPLRTFYRQLVLLPKVIQYAQYVLLVLGGLLLLIPAIILLRTQEKCSPFWSSSKKG
SKDKEALQAYSESLMTATPKGTVLQEARL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccgcgtgcgagcgcgcagggcggccgcggggctcggctgcttcgggctgctg
ctggccgcgctgggcggcgtgatgatcgcgttcgtgccgtcgctcatcaagcagcagatc
ctcaagaatgtgcgcatcgacccgaacagcctgtccttcgggatgtggaaggagatcccc
gtccccttctacatgtccgtctacttcttcaacgtcctcaacccccaggaggtcctgcag
ggccagaagccgtcggtgcaggagatgggcccctatgtgtaccgggagttccggcacaag
atcaacatcactttcaacgacaacgacaccgtgtccttcctggagcaccgcagctttcag
ttccaacctgagcggtcccgcggctctgaggatgactacgtagtcatgcccaacatcctg
gtcaatagtgccgcagccatgatggaggacaagcccatgggcctaaagctgatgatgact
ctggccttcagctccatgcaggagcatgctttcatgaaccgtaccgtccgggacatcatg
tggggttacgacgaccccctggtgaatcttatcaacaagtacttccccggcgtgctcccc
tttaagggcaaattcgggctcttctccgagctcaacaactccgactcggggctcttcacc
gtgttcacgggggtacaggacttcagcagaattcacctggtggacaagtggaatgggcta
agtaaggtgaattactggcactcagatcagtgtaacatgatcaatgggacatctgggcag
atgtgggcccccttcatgacccccgagtcctcgctggagttctatagccccgaagcctgc
aggtccatgaagctcatcttcaaggagcggggccatttcgaggggatccccacctaccgc
tttgtggcccccaagaccctgttcgccaacggctccgtgtacccgcccaacgagggcttc
tgcccctgccggcagtcaggcatccagaacgtcagtgcctgccgctttagtgccccttta
ttcctctcgcacccccatttctacaatgccgacccggtgctggcagagtccgtgattggc
ttgcatccaaatgaagaggaacattccttgtttctggacatccacccggtcacggggatc
cccatgaactgctcggtgaagctgcagctgagtctcttcatgaaggaggttcgaggtatc
ggacaaacagggaagatcaagccagtggtcctgccgttgatgtggtttggcgagagcggg
gccatggaggggaccccccttcggaccttctaccggcagctggtactcttgcccaaagtg
atccagtacgcccagtacgtcctcctggtgctcggcggcctcctgcttctcatccccgcc
atcatcctcctccggacccaagagaaatgctctcccttttggagtagtagtaagaagggc
tcaaaggataaggaggcccttcaggcctattccgaatccctgatgacagcgacccccaag
ggcacggtgctgcaggaggcgagactgtag
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integrated database retrieval system
