Suncus etruscus (white-toothed pygmy shrew): 126002048
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Entry
126002048 CDS
T09902
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03030
DNA replication
setr03410
Base excision repair
setr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126002048 (POLE)
03410 Base excision repair
126002048 (POLE)
03420 Nucleotide excision repair
126002048 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
setr03032
]
126002048 (POLE)
03400 DNA repair and recombination proteins [BR:
setr03400
]
126002048 (POLE)
Enzymes [BR:
setr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
126002048 (POLE)
DNA replication proteins [BR:
setr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
126002048 (POLE)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
126002048 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
126002048
NCBI-ProteinID:
XP_049625229
LinkDB
All DBs
Position
2:complement(4842316..4899616)
Genome browser
AA seq
2272 aa
AA seq
DB search
MVLRNSGKRRAEPAADGEPARDDGSSISAFKRLERSQWTDKMDSRFGFERLKEPGEKTGW
LINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVSLPYKPYFYIATRKGCEREVSSFLSK
KFQGKIAKIETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVRVRKEISPAVKKNREQGH
TSESYTAMLSSVLQGGNVIVDEEETSKKIVDQLDNIVDMREYDVPYHIRLSIDLKIHVAH
WYNVKYRGSAYPVEIFRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDG
QGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMVTY
NGDFFDWPFVEARAAVHGLSMYQEIGFQKDSQGEYKATQCIHMDCLRWVKRDSYLPVGSH
NLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALC
TIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGG
HVEALESGVFRSDIPCRFRMNPAAFDFLLQRVNQTVRHAVEEEEKVPIEEVTNFEEVCDE
IKAKLTSLKDIPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGAN
CQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLIPEGPTRAFHELSREEQAKYEKKR
LADYCRKAYKKIHVTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAA
VEGGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANI
ITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNVKKPKVTISYPGAMLNIMVK
EGFTNHQYQELTEPFSLTYITRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNED
GSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAA
NMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISR
KPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQ
KIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDIYKQKKISELFVLEGTRQVGATRAVE
GPPDIEDMGQVKSPYPAVPISTKRKRVLWESQEESQDLELTVPWQEILGQPPTLGTTQEE
WLVWLRFHKKKWQLQTRQRLARKKRQRLETSEDCPRSGVLRDGPSTGLGGFLRRTARSIL
DLPWQIVQISETSQAGLFRLWALIGSDLYCIKLNIPRVFYVNQRVAKAEEGPSYRKVNRV
LPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQLGCLCVV
NKQLAKHLSGREAETFTLEHLEMRTLAQFSYLEPGSIRHIYLYHHTQGHKALFGIFVPSQ
RRASVFVLDTVRSNQMPSLSTLYSTEHSLLLDKVGPELLPPPKHTFEVRAETDLKTICRA
IQRFLLAYKEERRGPTLIAVQSNWELKRLSGEIPVLEEFPLVPLRVTDNINYGVLDWQRH
GARRMIRHYLNLDTCLSQAFEMSRYFHIPIGNLPEDISTFGSDLFFARHLQRHNHLLWLS
HTLRPDLGGKEADDNRLLMEFDGQATVEINSSGCYSTVCVELDIQNLAVNTILQSHHVND
MEGASSMGVSFDVIPQASLEDMITGNQASSGPASYDETALCSSTFRILKSMVVGWVKEIM
QYHNVYADNQVMHFYRWLRSPCSLLHDPALHRTLHSMMKKLFLQLIAEFKRLGSSVVYAN
FNRIIICTKKRRIEDAIAYVEYITNSIHSKEIFHSLTISISRCWEFLLWMDPSNYGGIKG
NIPSNIHYGQQSSPKKDSMEENQEEEQQEEENVPEPDIEDLLENNWNILQFLPQAASCQS
YFLMIVSAYIVAVYHSMKEELRRTAPGSTPVRRKGASQLSQEAQGAASALPGTITFSQDY
VANELTQNFFTITQKIQKKVTGSRNSTELSEMFPVLPGSHLLLNNPALEFVKYVCKVLSL
DTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVICRSCNFCRDLDLCKDPS
FSQDGTVLPQWLCSNCQVAYDSSVIEMALVEALQKKLMAFTLQDLVCLKCQGVKETNMPV
YCNCAGNFALTIHTKDFLEQIGIFRNIAQHYGMSYLMETLEWLLQKNPQLSH
NT seq
6819 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaggaacagcgggaagcgccgcgccgagccggcggcggacggcgagcccgcc
agagatgatggctcctctatctcagcatttaagcgcttggagcgcagtcagtggactgat
aaaatggattctcgatttggttttgagagactcaaggaacccggtgagaaaacaggctgg
ctcatcaatatgcacccgaccgagattttagatgaagataaacgtttagtcagtgctgtg
gattactactttattcaagatgatgggagcagatttaaggtgtccttgccctacaaaccg
tatttctacattgcgaccagaaagggctgtgaacgagaagtttcatcttttctctccaag
aagtttcagggcaaaattgctaaaatagaaactgtgcccaaagaggatcttgatttgcca
aatcacttggtgggtttgaagcgaaattacattaagctgtcttttaatactgtggaggat
ctggtccgagtaaggaaggaaatctctcctgctgtaaagaagaaccgtgagcaaggccat
acgagtgaatcctacacagctatgctttccagcgttctgcaaggaggcaatgtaattgta
gatgaagaggaaacttctaagaagattgttgaccagttggacaacattgtggacatgagg
gagtatgacgtgccttatcacatccgcctttccattgacctgaagatccatgtggctcat
tggtacaatgtaaaataccgaggaagtgcctatcctgtggaaattttccgtcgagatgat
cttgtggaacgaccagatcctgtagttttggcatttgacattgagacgaccaagctgcct
ctcaagtttcctgatgctgagactgaccagattatgatgatttcctatatgattgatggt
caaggttatctcatcaccaatagagagattgtttcagaagatattgaagattttgagttc
acccccaagccagaatatgaaggacccttctgtgtcttcaatgaaccagatgaggttcac
cttatccaaaggtggtttgaacatgttcaagagaccaaacctaccatcatggtcacctac
aatggggacttttttgactggccatttgtggaagccagagcagctgtccatgggttaagc
atgtaccaggagataggcttccagaaggacagccagggggaatacaaggcgactcagtgc
atccacatggactgtctcaggtgggtaaagagggacagttaccttcctgtggggagccac
aacctcaaggcagctgccaaagccaagctgggctatgaccccgtggagctggaccctgag
gacatgtgccgtatggccacagagcagccccagactttagccacatactcagtgtcagat
gctgtggccacatactacttgtatatgaagtatgtgcaccccttcatattcgccctgtgc
accattattcccatggagcccgatgaggtgctgcggaagggctctgggaccttgtgtgag
gccctgctgatggtgcaggcttttcatgccaacatcatctttcccaacaagcaggaacag
gagttcaacaagctgactgatgatggccatgtactggactctgagacctatgttggtggc
catgtggaagcccttgagtcaggcgtgttccgcagtgacataccctgccgtttcaggatg
aatcctgctgcctttgacttcctgctgcagcgggtgaaccagaccgtgcgacatgctgtg
gaggaggaggagaaagtgcccatagaggaggtcacaaactttgaagaggtgtgtgatgag
attaaggctaaactcacctccttgaaagatattcctaatcgaattgagtgtcctctcata
taccacttggatgtgggagctatgtaccccaacatcattcttaccaaccgcctacagccc
tctgccatggtggacgaggctacctgtgctgcctgtgacttcaataagcctggagcgaac
tgccagcgaaagatggcctggcagtggagaggagagttcatgccagccagtcgcagtgag
taccatcggatccagcaccagttagaatcagagaagttccctcccctgatcccagagggc
ccaacccgtgcctttcatgagctatctcgtgaggagcaggctaaatatgagaagaagaga
ctggcagattactgccgtaaggcctacaagaagatccatgtgaccaaggtcgaagagcgc
ctcaccactatctgccagcgggagaactctttctatgtggacacggtgcgtgccttccgg
gaccggcgctacgaattcaaaggcctccacaaggtatggaagaagaaactctctgcagcg
gtagagggaggcgatgcggcagaggtgaagcgctgcaaaaacatggagatcttgtatgac
tcgctgcagctagcacataagtgcatcctcaactctttctacggttatgtcatgcgcaaa
ggggcccgctggtactcgatggagatggcgggcattgtctgcttcacaggagccaacatc
atcacccaggcccgagagctgatcgagcagattgggaggcccttggagctggacacagat
ggtatatggtgcgtactgcccaacagtttccctgagaacttcgttatcaagactaccaac
gtgaaaaagccaaaggtgaccatctcctaccctggagccatgttgaacatcatggtcaag
gaaggcttcaccaaccatcagtaccaggaattgacagagcctttctcactcacctatatc
actcgctcagagaacagcatcttttttgaggttgacggaccctatcttgccatgattctt
ccagcttccaaggaagaaggcaagaaactgaaaaagaggtatgctgtattcaatgaagat
ggttccctggcagagctgaagggctttgaggttaaacgccgtggggagctgcagctaatt
aaaatcttccaatcctcagtctttgaggcttttttgaagggtagcaccctggaagaggtg
tatggctctgtagccaaggtagctgattactggctggacgtgctctatagtaaggcagcc
aatatgcctgattctgaactgtttgagctcatctctgagaaccgctctatgtctcggaag
ctggaagactacggggagcagaagtccacatccatcagcacagccaagagactggctgag
tttctgggagatcagatggtgaaggatgcgggactgagctgccgctacatcatttcccgg
aagcctgaagggtctccagttactgagagggccatcccactagccattttccaggcagaa
ccgacagtgaggaagcactttctccggaaatggcttaagagttcttcccttcaagatttt
gacattcgaacaattctggactgggattactacattgagcggctgggaagtgccattcag
aagattatcaccatccctgcggcactgcagcaggtgaagaatcctgtgccccgtgtcaaa
caccctgactggctacacaagaaactattggagaagaatgacatttataagcagaagaaa
atcagtgagctctttgtccttgaaggcacgagacaggtgggcgccacccgggctgtggaa
ggtccccccgatatagaggacatgggccaagtaaagtcgccctacccagcagttcccatt
tctacgaagaggaagcgtgtcctgtgggagagccaggaagagtcacaagacctggaactg
acagtgccctggcaagaaatcttggggcagccccccactcttgggacgacccaggaagaa
tggttagtctggctccggtttcacaagaagaagtggcagctgcagacccgacagcgcctg
gctcgaaagaagaggcagcgtctggagacatcagaggactgccctcggtctggagtcttg
agagatggcccatccacaggactggggggcttcttgcgaagaaccgcccgcagcattctg
gaccttccttggcagattgtgcagatcagcgaaaccagtcaggccggcttgttcagactc
tgggctcttatcggcagtgacctctattgtatcaagctgaacataccccgtgtgttctat
gtgaaccagcgagtggctaaagccgaggagggtccatcataccgaaaggtcaatcgagtc
cttcctcgctctaacatggtctacaatctctatgagtactcagtaccagaggacatgtac
caggagcatattaatgaaatcaataccgagttgtctgccccagacattgagggcgtgtat
gagactcaggtgccgctattattccgggccctggtgcagttgggttgtctgtgtgtggtt
aataaacagctggcaaagcacctttcaggtcgggaagcagaaacattcactctagagcat
ctggaaatgcgtactttggcccagttcagttacctggaaccagggagcatccgccacatc
tacctgtaccaccacacacagggtcacaaggcactcttcggcatctttgttccctcgcag
cgtagagcatctgtgtttgtgctggatactgtgagaagcaaccagatgcccagcctcagt
accctgtactctaccgagcacagccttctgttggacaaggtgggccctgagctgctgccc
ccaccaaaacacacttttgaggttcgtgctgaaacggacttaaagaccatctgcagagcc
atccagcgctttctgctggcctataaggaggagcgccgtggacccacactcattgctgtt
caatccaactgggagctaaagagacttagtggagagattccagtcctggaagagttcccc
ctggtacctctccgagtgactgataacatcaattatggagtcctggactggcagcgccat
ggggcacgacgcatgattcgccattacctcaacctggacacctgtctatcacaggccttt
gagatgagcaggtacttccacattcccattgggaatctgcccgaggacatctccaccttt
ggctccgacctgttctttgctcgccacctccagcgtcacaaccacctgctctggctttcc
cacaccttgcgccctgacctgggcgggaaggaagctgatgacaaccgtcttctcatggag
tttgatggccaggccactgtggagattaatagttccggctgttactccacggtgtgtgtg
gagctggatatacagaacctggctgtcaacaccatcttgcaatctcatcatgtcaacgac
atggaaggagccagtagcatgggcgtcagcttcgatgtgatcccgcaggcctccctggaa
gacatgatcacaggcaaccaggccagcagtggcccagcaagctatgatgagacagcactt
tgctccagtacatttcggatcctgaagagcatggtggtgggctgggtgaaggagatcatg
cagtaccacaatgtgtacgcagacaaccaggtgatgcatttctaccgctggctgcgctcc
ccatgctcattgctgcatgaccctgcactgcatcgcacactccacagtatgatgaagaaa
ctcttcctacagctcattgctgagttcaaacgcctgggctcctcagttgtttatgccaac
ttcaaccgcatcatcatctgtaccaagaagcggcgtattgaagatgccatcgcctatgtg
gaatatatcaccaacagtatccactctaaggagatcttccattccttgacaatttctatc
tctcggtgctgggagtttcttctctggatggatccttctaactacggtggaatcaaagga
aatattccatctaacattcactatggacagcaaagctccccaaagaaggacagcatggag
gaaaatcaggaggaagaacagcaggaggaggagaatgtgccagagccagacatagaggac
ttgctggaaaacaactggaacattctgcagtttctgccacaggcagcctcctgccagagc
tacttcctcatgattgtttcagcatacatcgtagctgtataccatagcatgaaggaagag
ctgaggcgcactgccccaggaagcacccccgtgaggagaaagggagccagccaactctct
caagaagcccagggtgcagctagcgcacttcctggaaccatcaccttctctcaagattat
gtggcaaatgaactcactcaaaacttcttcacaattactcagaaaattcagaagaaagtt
acaggctctaggaactccactgagctctcagagatgtttcctgtcctccctggttctcac
ctgctactcaataaccctgctctggagttcgtcaaatacgtgtgcaaggtcttgtctttg
gatacaaatatcacaaaccaagtgaacaagctgaaccgggacctgcttcgcttggtggac
gtgggtgaattctcagaggaagcccagtttcgagacccatgccgctcctatgtactccct
gaagtcatctgtcgaagctgtaacttctgccgggacctagacctctgcaaagacccctcc
ttctctcaagatggtactgtcctgccccagtggctctgctccaactgtcaagtcgcctat
gattcatcagtcatcgagatggccttggtggaggccttgcagaagaaattgatggccttc
accctccaggacctagtctgcttgaagtgccagggagtgaaggagaccaacatgcctgtg
tactgtaactgtgctgggaactttgccctcactatccacactaaggattttctggagcag
attggaatcttccggaacattgcccaacactacggcatgtcatacctcatggaaacctta
gagtggctgctgcagaagaacccccagctgagtcactag
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integrated database retrieval system
