Suncus etruscus (white-toothed pygmy shrew): 126002058
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Entry
126002058 CDS
T09902
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
126002058 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126002058 (MYO5C)
04131 Membrane trafficking [BR:
setr04131
]
126002058 (MYO5C)
03029 Mitochondrial biogenesis [BR:
setr03029
]
126002058 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126002058 (MYO5C)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
126002058 (MYO5C)
mRNA cycle factors
P-body specific factors
126002058 (MYO5C)
Membrane trafficking [BR:
setr04131
]
Others
Actin-binding proteins
Myosins
126002058 (MYO5C)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
126002058 (MYO5C)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
126002058 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
AAA_16
WIV_dom_3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
126002058
NCBI-ProteinID:
XP_049625246
LinkDB
All DBs
Position
2:complement(15294396..15387290)
Genome browser
AA seq
1631 aa
AA seq
DB search
MNPYKQLPIYGDAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGK
TVSARYAMRYFATVSKSSSNTHVEEKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFD
ARNQIIGANMRTYLLEKSRVVFQSENERNYHIFYQLCASAQQPEFKHLKLGKAEEFNYTR
MGGNTLIEGVDDRADMIETQKTFTLLGFQQNFQMDVFQILAAILHLGNVQVTALSSERSS
VREDDSHLQVFCELLGLETARVAQWLCNRKIVTTSETVVKPMTRPQAMNARDALAKKIYA
HLFDFIVERINQALQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHV
FKLEQEEYMKENIPWTLIDFYDNQSVIDLIEAKMGILELLDEECLLPHGTDENWIQKLYN
NFVNKNPLFVKPRMSNMSFIIQHFADKVEYKCEGFLEKNRDTVYDTLVEILRTSKFHLCA
KFFQEPLVSSSPFGPVITVKSAKQIIKPSKHFRSTVGSKFRSSLYLLMETLNATTPHYVR
CIKPNDEKLPFEFDSQRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGILMTKQEL
AFNDKKEVCKVVLHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQGCVLIQKHIR
GWLQRKKFLRERDAALTLQRYFRGQQTVRKAVTAAALKEAWAAIIIQKHCRGYLVRNLYQ
LIRVATITIQAYTRGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQSIRRFVLNIQLT
YRVQRLQKKLEDQNRENHGLLEKLTSLAALRASDIEKIQKLESELDRATTQKHNYEEKGK
KFKATMEEKLAKLQKHNSELESQKEQVQLMLQEKTEELKEKMDDLTKQLFEDVQKEERQR
MLLEKSFELKSQDYQNNIQSLKDKINALKVEKMNLEHQLEEERITSVSLKGDVARLSKQA
QTISEFEKEIELLQEQKIDLEKHVQNQKREMREKMSEVTKQLLESYDIEDVRSRLSVEDL
EHLNEDGEIWFAYEGLKKATRVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFR
EENDINESIRHEVTRLTSENLMIPNFKQQISELEKQKQDLEIRLNKQNENVKENLEELSH
RLSQEKERTPRMTTEPQNEIHTEEKEKLVGKIQEMQAASQHLEAHEMESEVQNSFQQEAS
RLTMENRDLEEELDMKDRVIKKLQNQVKTLTKTIEKASNMHVPSEDKEYMGMLEYKRDDE
AKIVQNLILDMKPRGVVVNMIPGLPAHILFMCVRYADFVNDGNMLKSLMNSIINGIKQVV
KDHLEDFEMLSFWLSNSCHFLNCLKQYSGEEEFMKHNSPLQNKNCLNNFDLSEYRQILSD
VAIRIYHQFIMVMEDNIQPIIVPGMLEYESLQGISGRKPTGFRKRSSSIDDTDSYTMTSI
LQQLSYFYSTMCQNGLDPELVRQAIKQLFYLIGAVTLNSLFLRKDMCSCRKGMQIRCNIS
YLEEWLKEKNLHNSLAKDTLEPLSQAAWLLQVKKTTDSDAAEIYERCTALSSVQIIKILN
LYTPIDDFEKRVTPSFVRKVQALLNSREDSLQLMLDTKYLFQVTFPFTPSPHALEMIQIP
ISFKLGFLNRL
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttacaaacagttaccaatctacggagacgccatcatccatgcctatagcggg
cagaacatgggagacatggacccacacatatttgcagtggcagaagaagcctacaagcag
atggccaggaacaataaaaaccagtcaattattgtgagtggggaatcaggcgctggaaag
acagtgtctgctcgctacgccatgaggtactttgccaccgtcagcaaatcaagtagtaac
actcacgtggaagagaaggttctggcatcgaaccccattactgaggctgttggaaatgcc
aagaccacccgcaatgacaacagtagccggtttggaaaatacacagaaatcagttttgat
gcaagaaatcaaatcataggagccaacatgagaacttacctgctagagaagtccagagtt
gtctttcaatcagaaaatgaacggaattaccacattttctatcagctttgcgcatctgca
cagcaaccggaatttaaacatcttaaattaggaaaagcagaagagtttaattatacaaga
atgggtggcaatactcttatcgagggtgttgatgacagagctgatatgatagagacacaa
aagaccttcacgctattgggtttccagcagaatttccagatggatgtgttccagatcctg
gcagccatcctccatctgggcaatgtgcaggttacagccttgagcagcgagaggtcctct
gtccgtgaggatgacagccacctgcaggtcttctgtgagctcctgggcctggagacagcc
agagtcgctcagtggttatgcaatcgcaaaattgtcaccacctcggagacagtagtgaaa
cccatgaccaggccccaggccatgaatgctagggatgccctagccaagaagatctatgct
cacctctttgacttcattgtggaaaggattaaccaggccttgcagttctcaggcaagcag
cacacttttattggtgttttggacatttatggtttcgaaacctttgatgtgaacagcttt
gagcagttttgcatcaattatgccaatgaaaaacttcaacagcagtttaacctgcatgtc
tttaaactggaacaagaggaatacatgaaggaaaacatcccttggactttgatagatttt
tacgacaaccaatcagttattgacctgattgaagcaaaaatgggcattttggaattactg
gatgaagaatgtttgctgccacatggaactgatgagaactggattcagaaactgtataat
aattttgtcaacaagaaccctttgtttgtaaagcccagaatgtcaaatatgtcttttatc
atccagcactttgctgacaaggtagaatataagtgtgaaggcttccttgagaagaacaga
gatactgtctacgacacattggttgaaatcctgagaacaagcaagtttcatctctgtgca
aagttctttcaagaacctctggtttcttcttcccctttcggtccagtgatcacagttaaa
tctgcgaagcaaatcatcaagccaagcaagcacttccggagcacagtgggaagcaagttc
cgcagctccctctacttactcatggagactcttaatgccaccacaccccactatgtccgc
tgcatcaagccaaatgatgagaaactaccttttgagtttgactcccagagaattgtccag
cagctgcgggcatgtggcgtcttagagacaattcgcattagtgcacagagttatccttcc
aggtggacctacattgagttctatagtcgctatggcatcctcatgaccaagcaggagctt
gcattcaatgacaagaaggaagtgtgcaaagtagttttacacagactcatccaggattct
aatcagtaccagtttggcaaaaccaagattttctttagagcaggacaagtggcttattta
gagaaacttcgattggataagctgaggcaaggttgtgttttgatccaaaagcacatccgg
ggctggctccagaggaagaaattccttcgggagagggatgcagctctgaccctccagcgg
tacttccggggtcagcagaccgtgaggaaagctgttactgcagcggccttgaaagaagcc
tgggcggccataatcatccagaaacactgtcgtgggtacctggtccgcaatctgtatcag
ttgattcgagtggccactatcaccatccaggcttacacccgagggttcctggcaaggagg
aggtacagaaagatgctggaagagcacaaagctgtgattcttcagaagtatgcgagggcc
tggctggcccggcgaaggtttcagagtatccggcggtttgtgctcaacattcagctaacc
tacagggtccagcgtttacagaaaaagttagaagatcagaatagagagaaccatgggctg
ctggagaagctgaccagcctggctgctcttcgggctagtgatatagagaagattcagaaa
ctggaatcagaacttgacagagcaactacccagaagcataattatgaggagaaggggaag
aagttcaaggctaccatggaagagaaattggccaaactgcagaagcataattcagaacta
gaaagccaaaaggagcaggtccagctgatgcttcaagagaagactgaagagctaaaagaa
aaaatggatgaccttaccaagcagctctttgaagatgtgcaaaaagaagaacgacaacga
atgcttctggaaaaaagttttgagctgaaatcgcaagattatcagaacaacattcaatca
ttgaaagacaaaatcaatgctcttaaggttgagaaaatgaacttggagcatcagttggag
gaagagcgtatcacctcagtcagcctgaaaggagatgtggcaagactgagcaaacaggca
cagacaatatctgaattcgaaaaagagatagagctacttcaggaacagaagattgatttg
gagaaacatgtacaaaaccaaaaacgggaaatgagagaaaagatgtcagaagtcacaaaa
caacttcttgaaagctatgatattgaagatgtaagaagcaggctttctgtggaagatttg
gaacatttaaatgaagatggagaaatttggtttgcttatgaaggactaaagaaagcaaca
cgcgttctagagagccatttccagtcccagaaggattgctatgaaaaggagatcgaagca
ctgaactttaaagtggtgcatctaagtcaagaaataaaccacctccagaaattatttaga
gaagagaatgacatcaatgaaagtattcgtcatgaagtgaccaggctaacatcagaaaac
ctgatgatcccaaactttaagcagcaaatttcagaactagagaaacaaaagcaagatctt
gaaattcgcctgaataaacaaaatgaaaatgtgaaagaaaatctagaagaattgtctcat
cggttgagtcaagaaaaggaaagaacaccgagaatgaccacagaaccccagaatgaaatc
cacaccgaagagaaagaaaaactagtggggaagattcaagaaatgcaagcagccagccaa
cacttggaagcacatgaaatggaaagtgaagtccagaacagtttccagcaggaagcatct
cgactcactatggaaaaccgggatcttgaagaagagttagacatgaaggacagagtgatt
aaaaagctacaaaatcaggtcaagactctaaccaagacaattgaaaaagccagtaatatg
catgtgccatcagaagacaaggagtacatgggaatgctggaatacaagagagatgatgag
gccaagattgttcaaaatctcattctcgacatgaagccccgaggtgtggtggtgaacatg
atccctgggctaccagctcacatcctcttcatgtgtgtacgctatgcagactttgtaaat
gacggcaacatgctcaagtccctgatgaacagcatcattaatggcatcaagcaagtggtt
aaggatcatttggaagactttgagatgctgtccttttggctttccaattcttgtcatttt
ctcaactgcctgaagcagtacagtggagaggaggaattcatgaagcataatagtcccctt
cagaataagaattgcttgaacaattttgacctttcagaatacagacaaattcttagtgac
gtggctatacgaatctatcatcagttcattatggtaatggaagacaatattcaaccaata
atagtgccaggcatgctggagtatgaaagtctgcagggaatatctggtcggaaacccacc
ggcttccggaaacggtcatccagcatcgatgacacagacagctacaccatgacctccatt
ctgcagcagctgagctacttctacagcaccatgtgccaaaatggcttggaccccgagctt
gtgcggcaggcaataaagcagctcttctacctcattggggcagtcaccctcaacagcctc
ttcctgcgcaaagacatgtgctcctgcagaaagggcatgcagatacggtgcaacatcagc
tacttagaagaatggcttaaagaaaagaatttgcacaacagcttggccaaagatacacta
gaaccactgtctcaggcggcctggttgctgcaggtgaagaagaccacagacagtgatgct
gcagagatttatgagcgttgcactgccctatcttccgtgcagatcataaagatccttaat
ttatacacacctatagatgacttcgagaagagagttacaccatcttttgttcgcaaagta
caggctctccttaatagccgggaggactcattacagttgatgttggacaccaaatacctt
ttccaagtcacctttcctttcaccccttctcctcatgcactggaaatgatccaaatccct
attagtttcaaactgggctttctcaatagactgtaa
DBGET
integrated database retrieval system
