Suncus etruscus (white-toothed pygmy shrew): 126002060
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Entry
126002060 CDS
T09902
Symbol
GIGYF2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126002060 (GIGYF2)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126002060 (GIGYF2)
Surveillance factors
Other surveillance factors
126002060 (GIGYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
126002060
NCBI-ProteinID:
XP_049625249
LinkDB
All DBs
Position
2:complement(18718484..18872401)
Genome browser
AA seq
1284 aa
AA seq
DB search
MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDSKIPS
DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGSREMHRSQSWEERGDRRFEKPGRKDVGRP
NFEEGGPTSVRKHDFIRSESENWRIFREEQNGDDEDGGWRLAGSRRDGERWRPHSPDGPR
SAGWREHMERRRRFEFDFRDRDEERGYRRVRSGSGSIDDDRDSLPEWCLEDAEEEMGTFD
SSGAFLSLKKVQKEAIPEEQEMDFRPVEEVEEGSDSEGSHGEEAKEPDKTNKKEGEKTDR
VGTETSEETLQISSSVRPGTPSDHQPQESLPFERKEEPNTEQTEKGEEESQTESGLPTKV
PSRGDEMVTDVQQPLSKISDTASPLLILPPPVPNPSTALRPVETPVVGAPGMGSVSTEPD
DEEGLKHLEQQAEKMVAYLQDSALDEERLPSKLQEPRAKGVQMPLMHEAMQKWYYKDPQG
EIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQPLGDIMKMWGRVPFSPGPAPPPHMG
ELDQERLTRQQELTALYQMQHLQYQQFLLQQQYAQVLAQQQKAALSSQQQQQLALLLQQF
QALKMRISDQNVIPSVARSVSVPDTGSIWELQPTASQPTVWESGSVWDLPLDTTSSGPAL
EQLQQIEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEE
ELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEELLRKQ
EEEAAKWAREEEEAQRRLEEKPATEWKRRAARIRHEEEERRGKSWNFSVRRSKCARGSKQ
QEALRRLQQQQQQQQLAQMKLPSSSTWGQQSSTAACQSQATLSLAEIQKLEEERERQLRE
EQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPAGTTKSLLEIQQEEARQMQKQQQQQQQ
QQQQPSRSRNPPHSNLHTSMGNSVWGSINTGPPNQWASDLVSSIWSNADNKNSNMGFWDD
AVKEVGPRNSTNKNKNSASLSKSVGVSNRQNKKVEEEEKLLKLFQGVNKAQDGFTQWCEQ
MLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYLGDTSEAKEFAKQFLERRAKQKTS
QRQQQQQQQQQQQDSVWGMNHSALHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPS
LLGFSVNASSERLNMGEIETLDDY
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaacgcagaccctgaactttggacctgaatggctccgagctctgtcaagt
ggcggcagcatcacatcccctccactttctccagcgttgcccaagtataagttagctgac
tatcgttatggccgagaagaaatgttagcacttttccttaaagacagcaagataccttca
gaccttctggataaagaatttctgcctattctacaggaggagcccctgccaccactggct
cttgtacctttcacagaagaagaacagagaaatttttccatgtctgtaaatagtgctgct
gtcctgagattgacaggacgaggaggaggaggaacagtggtgggggctccaagaggtcga
agttcttcaagagggagaggcagaggcagaggtgaatgtggtttctaccaaagaagcttt
gatgaagtagagggtgtgtttggtcgcggtggtagcagggaaatgcataggtcgcagagc
tgggaggaaaggggtgacagacgttttgaaaagccaggacgaaaagatgtaggaagacca
aattttgaggaaggtggaccaacatcagtgagaaaacatgactttatacgatcagaaagt
gaaaattggagaatctttagagaggaacaaaatggagatgatgaagatggaggttggcgg
ctagctggatctagaagggatggagagaggtggcggcctcatagtcctgatggcccccgt
tctgctggctggcgggaacatatggaacggcggcgtcgatttgagtttgacttccgagac
cgggatgaggaacgcggttaccgaagggtgcgttcgggcagtgggagcatcgatgatgac
cgggacagcttgcctgagtggtgccttgaggacgctgaggaggagatgggtaccttcgac
tcttctggagccttcctctctctgaagaaagtgcaaaaagaagccatcccagaagaacag
gagatggacttccggcctgtggaggaagtagaagagggctctgattctgagggcagtcat
ggtgaagaagccaaagaacctgataagacgaataagaaagagggggagaaaactgacaga
gtaggaactgaaactagtgaggaaacactccaaatctcctcgtctgttcgaccaggcact
ccttcagaccatcagccgcaggaatcattaccatttgagaggaaagaggaacccaacact
gaacaaacagaaaaaggtgaagaagagagtcagacagaaagtggtctaccaaccaaagtg
cccagtagaggggatgaaatggttactgacgtccagcagcccctgtcaaagatttcagat
acagcctctccacttctcattcttccacctcctgttcccaatcccagtactgccctccgg
ccagttgaaacaccggtcgttggtgctcctggtatgggaagtgtttctacagagccagat
gatgaagagggtctcaaacatttggaacagcaagctgagaagatggtggcttatcttcaa
gacagtgctctggatgaggagagactgccatcgaaactgcaggagcccagagcgaagggt
gtgcaaatgcccttaatgcatgaagcgatgcaaaagtggtattataaagatcctcaggga
gaaatccaaggtcccttcaataatcaggaaatggcggaatggtttcaggcaggctatttc
actatgtccttattggtgaagagagcatgtgatgaaagtttccaacctcttggtgatata
atgaagatgtggggaagagttcccttttctcctggtccagctcctcctcctcatatggga
gagttggatcaggaacgactgaccaggcagcaagaactcacggccttataccaaatgcag
cacctccagtaccagcagttcttattacagcagcagtatgcccaggttttggcgcagcag
cagaaagccgccctgtcttcgcagcagcaacagcagctagcacttcttctccagcagttc
caagccttgaaaatgagaatatccgaccagaatgtcattccctccgtagcaaggtcagtg
tcagtaccagatactggttctatatgggaacttcagccaacagcctcacagcctacagtc
tgggaaagtggtagtgtatgggatcttcccctggacacaacgtcttctggacctgctctt
gaacagctccagcagatagagaaggccaaagctgcaaagctagagcaggagagaagagag
gcagaaatgagggcaaaaagggaagaggaggaacgaaagaggcaagaagaactgcggaga
cagcaggaggagattcttaggagacagcaagaggaagaaaggaagagacgggaggaagaa
gagcttgcccgaaggaaacaggaagaggctctgcgacgccagagggagcaagaaattgca
ttaaggcgacagcgggaggaggaagagaggcagcagcaagaggaagcacttcggagattg
gaagagaggagaagagaggaggaggagaggcgaaaacaggaggagttgttacgcaagcag
gaagaggaggctgcaaaatgggcccgggaagaagaagaagcccagcgccgtttagaggag
aagccggctacggaatggaagaggagggcggccagaattcggcacgaggaagaagagcgg
agaggaaagagctggaacttcagcgtcagaaggagtaaatgcgccagaggcagcaagcag
caggaggctctgcggaggctgcaacagcagcaacagcagcagcagcttgcacagatgaag
cttccctcctcttcaacatggggccaacagtctagtacagcggcatgtcagtcccaggcc
acgctgtcactggctgaaatccagaaactagaagaggaacgagaacggcagcttcgagaa
gagcagcggcgccagcagagagaactgatgaaagctctgcagcagcagcagcaacagcag
cagcagaaactctcaggttgggggaacgtcagcaaacctgcaggcaccaccaagtccctt
ctggagatccagcaggaagaagccaggcaaatgcaaaagcagcaacagcaacagcagcag
caacagcagcagccaagtagatctcggaatcctccacattccaacctgcacaccagcatg
gggaattctgtttggggttctataaatactggtcctccaaaccagtgggcatctgaccta
gtcagtagtatctggagtaatgccgacaataaaaattccaacatgggattctgggatgat
gcagtgaaagaggtgggacctaggaattcaacaaataaaaacaaaaacagcgccagtctc
agtaaatctgtaggtgtgtctaaccggcagaataagaaagtagaagaagaagaaaagttg
ctgaagctctttcagggagtaaataaagcccaagatggatttacccaatggtgtgaacag
atgcttcatgcccttaatacggcaaataacttggatgtccccacatttgtttctttcctg
aaagaagtagaatcaccgtatgaggtccatgattatataagggcctatttaggagatacc
tctgaggccaaggagtttgccaagcaattcctcgagcgccgtgccaagcagaaaactagc
cagcggcagcagcaacaacaacagcagcaacagcagcaggactctgtgtgggggatgaac
cacagtgcactccattcagtatttcagaccaatcagagcaacaatcagcaatcaaatttt
gaagccgtacaaagtggcaagaaaaagaaaaagcaaaagatggttcgagcggatcccagt
ttattaggattttcagttaatgcttcctcggagcgactgaatatgggtgaaatcgagaca
ctggatgactactga
DBGET
integrated database retrieval system
