Suncus etruscus (white-toothed pygmy shrew): 126002771
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Entry
126002771 CDS
T09902
Symbol
DENND4C
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126002771 (DENND4C)
Membrane trafficking [BR:
setr04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
126002771 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
126002771
NCBI-ProteinID:
XP_049625356
EnsemblRapid:
ENSSRTG00000001298
LinkDB
All DBs
Position
1:46173915..46260568
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AA seq
1952 aa
AA seq
DB search
MIEDKGPRVTDYFVVAGLTDTSTPLDQEINRLDTKSTGPKAPITDIAVIIKSAGETVPEG
YTCVEATPSALQANLNYGSLKSPELFLCYKRGRDKPPLIDIGVLYEGKERLISGCEVIQA
TPYGRCANVNNSSTSSQRIFITYRRASPVRPQNSLAVTDICVIVTSKGETPPHTFCKVDK
NLNCGMWGSSVFXCYKKSVPASNALAYKAGKIFRYPEDDYESFPLSESVPLFCLPMGATI
ECWDPQTKYPLPVFSTFVLTGSSAEKVYGAAIQFYEPYSREFLTEKQLMQLGLLTPVERK
VVSKSINSNKCICLLSHWPFFDAFRKFLMFIYKLSVSGPHPLPIEKHISYFMQNIPFPSP
QRPRILVQLSVHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLESKILLH
SLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAAVLSAPLPFIVGVDSRYFDLHDPP
QDVVCIDLDTNMLYISDEKKSMNWKQLPKKPCKNLLSTLKKLYPQLFSVHRKPQEDSAIE
MTPIEADFSWQKKMTQLEMEIQEAFLRFMASILKGYRTYLKPITEAPSNKATAADSLFDR
QGFLKSRDRAYTKFYTLLTKTQIFIRFIEECSFVSDKDTGLAFFDDCIEKLFPDKCTEKA
DKVDFDLTEDTKLIELDDSQKSEHTVFIMPPEPPPDDGKDLSPKYSYKYFPRLDLKLFDR
PQELKLRFSRHPAGNSISNSPALMAKRTKQEIKTAHKLAKRCYTNPPQWAKCLFSHCYSL
WFICLPAYVRVSHPKVRALQQAYDILTKMRKTDVDPLDEVCYRVVMQLCGLWSHPVLAVR
VLFEMKTAKIKPNAITYGYYNKVVLESPWPSSTRSGIFLWTKVRNIIRGLAQFRQPLKRN
MQKSQVSASTVPQNSTGGIDGDTTSHGSVDSANDANSGEQTVFVRDLISIDSTDNHSSTG
GQSDQGYGSKDELIKDDTEIHVPEDQVVRELITKTKDQPEDLCDIPAPTAKHSQSSTESH
SPAEPPGWGSSIVKVSSGIFDINNRKSSIGSASNVLFSTQDPVEEVVSGEVTNLKKNGDK
GEKRQKHFSERSCSFSSESRAGMLLKKSSLDLNSSEMAIMMGADAKILTAALTCPKTSPL
HNAGTHSFPSADTTLRVSQSIRESEHRSSMLEMLEESQELLEPVVDDAEAKTLVTTDIYD
SLQSNSSSSQSIDLKTESKDLLNKRSSLYSVAKAVEREDVETGLDPLSLLATECVGEKTS
DSEEKFSPVVARNLADEIESYMKLKSPLGNKSSSMELHREESRDSSTTAAFVQSLDRRSS
LPLDHSPPTQENPGSEKTSPSVSRSKTFAGRFKQHTPSRAHKDRSGSLSALVRSSPHGSL
GSVVNSFTTSLKLDNILSGPKIDVLKSGMKQAATVASKMWVAVASAYSYSDDEEETNRDY
SFPAGLEDHILGENMSPNTSISGLVSSELTQSNTSLGSSSSSGDVGKLNYLTGEVPFPRA
TKGQDFEKSDHGSSQNTSMSSIYQNCAMEVLMSSCSQCRACEALVYDEEIMAGWMADDSN
LNTTCPFCKSNFLPLLNIEFKDLRGSASFFLKPSTSGDSLQSGSIPLASEPLEHKPASSS
VEPDLINFMDFPKLNQTITEETSTTVESSEEIKKITGDVQTVKLSSVPNNLSKKNVSLTR
SHSVGGPLQNIDFAQRPFHGLSTVSLPNSLQEVVDPLGKRPNPPPVSVPYLSPLVLRKEL
ESLLENEGDQVIHTSSFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNGGVQLPLS
SLSQDSKLVYIQLLWDNINLHQEPGEPLYISWRNFNSEKKSTLLSEEQQATSTLVETIRQ
SIQHNDVFKPINLLSQQMKPDMKRQRSLYREILFLSLVSLGRENIDIEAFDNEYENAYNN
LSSDILEKLQKIDVPPNVNVEWCRKCFGAPLI
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaagggccaagagtgaccgactactttgttgtggcaggtcttactgat
acatctactcctttggatcaagaaataaatcgtttagatactaagtcaactggaccgaaa
gctccaattacagatattgcagttattatcaaatcagctggggaaacagtccctgaaggt
tatacctgtgttgaagccactccgtcagctctccaagcaaacttgaactatggaagtttg
aaaagcccagaacttttcctctgttacaaaagagggagagataaaccaccacttattgat
attggagttttatatgaagggaaagaaaggcttatttcaggatgtgaagtgatccaagcg
acaccctacggtcgctgtgccaatgtcaacaatagttcaaccagttcacaaagaatcttc
atcacttatagaagggcttcaccagttcgaccccagaattccttggctgtgactgatatc
tgtgttattgtaacaagtaaaggagaaacccctcctcatactttctgcaaagttgacaaa
aacttaaactgtggaatgtggggttccagtgtgttcntgtgttataagaagtctgtgcct
gcttctaatgcattagcgtataaagctggtaaaattttcagatatccagaagatgactac
gaatcatttccactttcagaatctgtacccctgttctgccttcctatgggagctactatt
gaatgttgggatcctcaaaccaaatacccacttccagttttttcaacttttgtcctgaca
ggttcttcagccgaaaaggtatatggagctgccatccagttttatgaaccctactctcgg
gaatttctaacagagaaacagcttatgcaactgggtctattgacacctgtggagagaaaa
gtggtttccaaatctatcaattcaaacaaatgcatttgtttactctcacactggcctttt
tttgacgcttttagaaaatttctcatgtttatctacaagctttctgtctctggaccacat
cctcttcctattgaaaagcatatttcatattttatgcaaaatatcccctttccttcacca
caaagaccaagaatccttgtacagctgtcagtccatgatgccttgatattatcacaacca
gtttctacacctttaccactaagtggagccaactttagcactttgttaatgaatttgggc
cctgagaattgtgcaacactgctgctcttcgttttacttgagagtaaaattctgttgcat
tctctgaggccagcagtgttgactggagtcgctgaagctgttgtagctatgatctttccg
tttcagtggcaatgcccatatattcccctttgtcctctttcactggcagcagtgcttagt
gcacctttaccatttatagttggagttgactcaaggtattttgatcttcatgacccacca
caagatgttgtttgcattgacttggatacaaacatgttgtatatatcagatgaaaagaag
agcatgaactggaagcagcttcccaaaaaaccatgtaaaaatctacttagcaccttgaag
aaattgtatccccaactgttttcagttcatcgaaaaccccaagaagattcagcaatagag
atgactccaattgaagcagatttctcttggcaaaagaagatgacacaacttgagatggaa
attcaagaggcatttttgcgctttatggcatccatattaaagggatatagaacatacctc
aaaccaattacagaggctccttcaaataaagctacggctgctgattcattgtttgaccgc
caaggatttttaaaaagccgagatcgtgcctatacaaaattctacactctgttaaccaaa
acacagatttttattcgtttcattgaagaatgtagttttgtaagtgataaagatactgga
ttggcattttttgatgactgcatagaaaagttgtttcctgataaatgcacagaaaaagca
gataaggttgattttgatttaacagaagataccaaattaatagagctagatgattcacag
aaaagcgagcatactgtattcataatgccaccagaaccaccacctgatgatgggaaggac
ctgtcaccaaagtacagttataagtactttccaaggctggaccttaagctttttgacaga
ccacaggaattgaaacttcgttttagtagacaccctgctgggaatagcatttccaacagt
ccagctctgatggctaagagaactaaacaggagataaaaacagctcataagttggcaaag
agatgttatacaaatccaccacaatgggccaagtgtctcttcagtcattgttatagttta
tggtttatttgtctcccagcctatgttagagtttctcatcctaaggtcagagcacttcag
caggcgtatgatatacttaccaaaatgaggaaaacagatgtggatccactagatgaggtt
tgttatcgagtagtaatgcagctttgtggactttggagtcatcctgttttagcagtgaga
gtcttatttgaaatgaagactgcaaagataaaaccaaatgctattacttatggttattat
aataaggtagttttggaaagcccttggcccagcagtacccgcagtggtatcttcttatgg
acgaaggtacggaacatcattcgtggcttggcacaatttaggcagccacttaaaaggaat
atgcaaaagtcacaggtctctgcatcaacagtgcctcagaattccacaggtggaattgat
ggagacacgacaagccatggtagtgtggatagtgctaatgatgcgaacagtggggagcag
acagtcttcgtcagagacttaatcagtattgattccactgataatcactctagtacaggt
ggtcagtctgaccaaggctatggctctaaagatgaacttataaaggatgatacagaaatt
catgtgcctgaagatcaagtagtaagagaactgataactaaaactaaagaccaaccagaa
gatctgtgtgatatccctgctcctacagcaaagcattcacaatctagtacagagtcacat
agtcctgctgagccacctgggtggggaagtagcatcgtgaaagtttcatctggtattttt
gacatcaacaataggaaaagtagcattggtagtgcgtcaaatgtgctattctctactcaa
gatccagttgaagaagtagtatctggtgaggttactaatctcaagaagaatggtgacaag
ggagaaaaaagacaaaaacatttttcagagagaagttgtagttttagttctgaaagtcga
gcaggaatgttgcttaagaagagtagtttggatttgaattcaagtgaaatggctatcatg
atgggagcagatgccaagatcctcacagcagcattgacatgtcccaagacatctccactt
cataatgcaggaactcatagctttccttcagctgatactacgcttcgtgtgtcacaaagc
atacgggagtctgagcataggtcatccatgttagagatgcttgaggaaagccaagagctc
ctagagcctgttgttgatgacgctgaagctaaaactttggtgacaacggatatttatgac
agtctacaaagtaatagtagtagtagtcagtccatagacttaaagactgaatccaaagat
ctgttgaataagagaagcagtttatatagtgttgctaaagctgtcgagagagaagatgtt
gaaactggactagatcctttgtctcttttagctactgaatgtgttggggaaaaaacttcg
gattctgaagagaaattttctccagttgttgcacgtaatctggctgatgaaattgagagc
tatatgaaactaaaaagccctctaggcaacaagtcttctagtatggaattacatagagag
gaaagcagagattctagtactacagctgcatttgttcagtctttagacaggagatcaagt
cttcctttagatcatagtccacccacacaggaaaatcctggaagtgaaaaaacgtcccct
tcggtgtccaggtctaaaacttttgctggacgcttcaagcagcacactccatctcgagct
cataaagatcgttcaggctctctgtcagcactggtgcgctcttcaccacatggctcattg
ggctctgtggtaaattcttttaccacaagtttaaaactggataatatactatcaggacct
aagatagatgtgctgaaatctggtatgaaacaagcagcaacagtagcaagtaagatgtgg
gttgctgtagcatctgcctacagctattcagatgatgaggaggaaactaatagagattat
agcttccctgctggccttgaagaccatattttgggagagaatatgtcacctaatacaagt
atttcaggtctggtctccagtgaacttacccaaagcaacacaagccttggcagtagcagc
agcagtggagatgttgggaaactgaattacttaacaggtgaagttccatttccaagagcc
acaaaaggacaggactttgaaaaatcagaccatggttcttctcaaaacaccagcatgtct
agcatctatcaaaattgtgccatggaggttttgatgtcaagttgttcacagtgcagagct
tgtgaggctttagtttacgatgaagaaattatggctggatggatggcagatgattcaaat
ttgaatacaacctgtccattctgtaaaagcaacttcttacctcttctcaatatagaattt
aaagacctgagaggttctgcaagcttttttctgaaaccaagtacctctggtgatagttta
caaagtggaagcatcccattggcaagtgaacctttggaacataaacctgcatccagctcg
gtagaacctgacttgattaacttcatggatttcccaaaacttaaccagaccataactgaa
gaaacaagcacaacagttgaatcaagtgaggaaataaagaaaatcactggtgatgtccaa
actgtgaaattgtcatctgtgcctaataatttatcaaagaagaatgtatctctgactcga
agtcacagtgtaggaggacccttgcagaatattgacttcgctcagcgaccatttcatggc
ctttcaacagttagtcttcccaacagtcttcaagaagttgtggatcctttaggaaaaaga
ccaaatcctccccctgtttctgtgccctacttgagtccattagtacttcgtaaagaactt
gaatctttgctagaaaatgaaggtgaccaggtgattcacacatcctctttcatcaaccaa
catccaatcattttctggaaccttgtttggtattttagacgtttggatcttccgagtaac
ctgccaggacttatcctcacatctgaacattgtaatggaggtgtacagcttcctctgtca
tcattatcccaggatagtaaacttgtatatattcagttgttatgggataatatcaacctt
catcaggaaccaggagaacctctatatatatcatggaggaatttcaattctgaaaagaaa
tcaactcttctgtcagaggaacaacaagcaacaagcactttagtagaaactatcaggcaa
agtattcaacataatgatgtttttaaacccattaaccttctttcacagcaaatgaagcca
gacatgaaaaggcaaaggagtttatacagggagatcctcttcttgtcattagtgtctctt
ggaagagagaatattgatattgaggcctttgacaatgaatatgaaaatgcatacaataat
ctatcttcagacattcttgaaaagttgcagaaaattgatgtaccaccaaatgtcaatgtg
gaatggtgcaggaagtgttttggagcacctcttatttga
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