Suncus etruscus (white-toothed pygmy shrew): 126003291
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Entry
126003291 CDS
T09902
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04020
Calcium signaling pathway
setr04024
cAMP signaling pathway
setr04080
Neuroactive ligand-receptor interaction
setr04082
Neuroactive ligand signaling
setr04713
Circadian entrainment
setr04720
Long-term potentiation
setr04724
Glutamatergic synapse
setr05010
Alzheimer disease
setr05014
Amyotrophic lateral sclerosis
setr05017
Spinocerebellar ataxia
setr05020
Prion disease
setr05022
Pathways of neurodegeneration - multiple diseases
setr05030
Cocaine addiction
setr05031
Amphetamine addiction
setr05033
Nicotine addiction
setr05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
126003291 (GRIN2C)
04024 cAMP signaling pathway
126003291 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
126003291 (GRIN2C)
04082 Neuroactive ligand signaling
126003291 (GRIN2C)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
126003291 (GRIN2C)
04720 Long-term potentiation
126003291 (GRIN2C)
09159 Environmental adaptation
04713 Circadian entrainment
126003291 (GRIN2C)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126003291 (GRIN2C)
05014 Amyotrophic lateral sclerosis
126003291 (GRIN2C)
05017 Spinocerebellar ataxia
126003291 (GRIN2C)
05020 Prion disease
126003291 (GRIN2C)
05022 Pathways of neurodegeneration - multiple diseases
126003291 (GRIN2C)
09165 Substance dependence
05030 Cocaine addiction
126003291 (GRIN2C)
05031 Amphetamine addiction
126003291 (GRIN2C)
05033 Nicotine addiction
126003291 (GRIN2C)
05034 Alcoholism
126003291 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126003291 (GRIN2C)
Ion channels [BR:
setr04040
]
Ligand-gated channels
Glutamate (ionotropic)
126003291 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
126003291
NCBI-ProteinID:
XP_049625403
LinkDB
All DBs
Position
1:complement(204146337..204162026)
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AA seq
1198 aa
AA seq
DB search
MLKWTDMGNALEPVLLFMTLLGAWAGQGPGPSQQALTVAVVFGSAGPPHSPARSRLTPQN
FLDLPVGIQPLTVGVNHTNPRSLLMQICGLLGAAQVHGIVFEDSVDTEAVAQILDFISSQ
THVPILSISGGSALVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYAWGAFAVITSLHPG
HALFLEGVRAAADANSPGWRLLDVLTLELGPGGPRAQTQRLLRSLDAPVLLAYCSRAEAE
VLFAEAARAGLVGPGHVWLVPSLALGSTDAPPASFPVGLISVVTASWRLSLRQKVRDGVA
VLALGAHGYRRQYGVLPGPAGDCQGRPGPVGPAREAFYRHLLNVSWEGRDFSFSPGGYLV
QPTMVVIALNRHRLWEMVGRWDHGILHMKYPVWPRYSTSLQPVVDSRHLTVATLEERPFV
IVESPDPGTGGCVPNTVPCRRQTNHTFGSGDAPPYTKLCCKGFCIDILKKLAKVVKFSYD
LYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVM
VARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLSSGKKPGG
PSFTIGKSIWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQE
QYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHVHMVKFNQRSVEDA
LSSLKMGRLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKGSHWKRPID
LALLQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFA
WEHLVYWKLRHTVPDASRLDFLLAFSRGIYSCFSGVQSLASPPRQPSPDLTASSAQASVL
KMLQAARDMVSTAGVSSSLDRAARTIEHWGGGRRGTPSPACPCSRPPTPHPVPEPNPQSW
APRSARRRRRRLPGPPAPLPDVSRGCEARGPCGAPQRCELPECRHYSSFPRAQRSGRPFL
PLFPEPPEPADLAMLGPEQLERREALLRAAWARGMRARHASLPSSVAEAFPACCARLGCD
HWVPLPSYPEACQEGCWACQGLPAWPYRHQVCAHAHTHLPLCWRPICPSLPLPPCASHSP
WLSGAWGAPGCRSRTLGLSTGYRDSGGLEEACRPACGVHHSYPGLCTWRRISSLESEV
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtggacagacatgggcaacgccctggagcctgtcctgctcttcatgaccctc
ctgggggcctgggcaggacagggccccgggccgagccagcaggccttgacggtggccgtg
gtgtttggcagcgctgggcctccacactcgccggcccgtagccgcctcactccgcagaac
ttcctggacttgcccgtggggatccagccactcactgttggggtgaaccacacgaacccc
agaagcctcctcatgcagatctgcgggctcctgggggccgcacaagtccatggcatcgtg
ttcgaggacagtgtggacacagaggcagtggcccagatcttggacttcatctcttctcag
acccacgtgcccatcctcagcattagcgggggctctgccttggtcctcactccaaaggag
ccgggctccgccttcctgcagctgggcgtgtcgctggagcagcagctgcaggtgctgttc
aaggtgctggaggagtacgcttggggcgccttcgccgtcatcaccagcctgcacccgggc
cacgcgctcttcctggagggcgtccgcgccgcggccgacgccaactccccgggctggcgg
ctgctcgacgtgctcacgctggagctgggcccgggcgggccgcgcgcgcagacccagcgg
ctgctgcgctccctggacgcgcccgtgctgctggcctactgctcgcgcgccgaggccgag
gtgctgttcgccgaggcggcgcgggccggcctggtggggcccgggcacgtgtggctggtg
ccctccctggcgctgggcagcaccgacgcgccgcccgcgtccttccccgtgggcctcatc
agcgtcgtcacggccagctggcggctcagcctgcgccagaaggtgcgcgacggcgtggcc
gtgctggccctgggcgcccacggctaccggcgccagtacggcgtcctccccggcccggcg
ggggactgccagggccgccccggacccgtcggccctgcccgggaggccttctacaggcac
ctactgaacgtctcctgggaaggccgagacttctccttcagccctggggggtacctggtc
cagcccaccatggtggtgatcgccctcaaccggcaccgcctctgggagatggtgggccgc
tgggaccacggcatcctgcacatgaagtacccggtgtggccccgctacagcacctcgctg
cagcccgtggtggacagccgccacctgacagtggccacgctggaggagaggcccttcgtg
atcgtggagagccccgaccctggcacgggcggctgcgtgcccaacacggtgccctgccgc
cgccagaccaatcacaccttcggcagcggggacgcgcccccttacaccaagctctgctgc
aaaggcttctgcatcgacatcctgaagaagctggccaaggtggtcaagttctcctacgac
ctgtacctggtgaccaacggcaagcacggcaagcgggtgcgaggcgtgtggaacggcatg
atcggggaggtgtactacaagcgcgcagacatggccatcggctcgctcaccatcaatgag
gagcgctctgagatcgtggacttctcggtgccctttgtggagacgggcatcagcgtgatg
gtggcacgtagcaacggcaccgtgtccccttccgccttcctggagccctacagcccagcc
gtgtgggtcatgatgttcgtcatgtgtcttaccgtggtggccatcactgtcttcatgttc
gagtatttcagccccgtcagctacaaccagaacctcagcagtggcaagaagccggggggt
ccatctttcaccatcgggaagtccatctggctgctctgggccctggtcttcaacaactcg
gtgcccatcgagaacccccgagggaccacgtccaagatcatggtgctggtgtgggccttc
ttcgctgtcatcttcctcgccagctacactgccaacctggctgccttcatgatccaggag
caatatatcgacacggtgtcaggcctcagcgacaagaagttccaacggccccaggaccaa
tacccgcccttccgctttggcaccgtacccaatggcagcaccgaacgaaacatccgaagc
aactaccgcgacatgcatgtacacatggtcaagttcaaccagcgctcggtggaggatgct
ctaagcagcctcaagatggggaggctggacgcctttatctatgacgcagctgtgctcaac
tacatggcgggaaaggatgagggctgcaagctggtgaccatcggctctggcaaggtcttt
gccaccacgggctacggcattgccatgcagaagggctcccactggaagcgccccatcgac
ctcgcgctcttacagttcttgggggatggggagacccagaaactggagacagtgtggctc
tcggggatctgccagaatgagaagaacgaggtgatgagcagcaaactggacatcgacaac
atggctggagttttctacatgctgctggtggccatggggctggcgctgctggtcttcgcc
tgggagcacctggtctactggaagcttcgacacaccgtgcccgacgcgtcccgactggac
ttcctgctggctttcagccggggcatctacagctgcttcagcggggtgcagagcctggcc
agccccccgcgacagcccagcccggacctcaccgccagctcggcccaggccagcgtgctg
aagatgctgcaggcggcccgggacatggtgagcacggcgggggtgagcagctccctggac
cgcgccgcgcgcaccatcgagcactggggaggcggccgtcgggggaccccatcgccggcc
tgtccctgctcccggccccccactccccacccggtcccggagcccaatccgcaaagctgg
gctccgaggtccgcccggcgccgccgccgcaggctcccggggccccccgcacccctgccc
gacgtgtcccgggggtgcgaggcgcggggaccctgcggggccccgcagcggtgcgagctg
cccgagtgccgccactacagctccttcccccgagcccagcgatcggggcgccccttcctc
ccgctcttcccggagccccccgaacccgcggacctggcgatgctcggacccgagcagctg
gagcggcgcgaggcgctgttgcgcgccgcctgggctcggggaatgcgcgcccgacacgct
tccctgcccagctcggtggcagaggcctttccagcctgctgtgcccgcctggggtgcgac
cactgggtgccactcccctcctacccggaggcttgccaggagggctgctgggcgtgccag
gggctgcccgcctggccctacaggcatcaggtctgcgcccacgcgcacacccacctgcca
ctctgctggaggcctatctgcccttccctgcccctgccaccctgtgccagccacagcccc
tggctctctggggcctggggagctcccgggtgcagaagcaggaccctgggactgagcacc
ggctaccgggacagtggggggctggaggaggcctgcaggccggcttgtggggtgcatcac
agctatcctggactttgcacctggaggcggatctccagcttggaatcggaagtgtga
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integrated database retrieval system
