Suncus etruscus (white-toothed pygmy shrew): 126003368
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Entry
126003368 CDS
T09902
Symbol
SOX9
Name
(RefSeq) transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04024
cAMP signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
126003368 (SOX9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126003368 (SOX9)
Transcription factors [BR:
setr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126003368 (SOX9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
126003368
NCBI-ProteinID:
XP_049625509
LinkDB
All DBs
Position
1:201884550..201888420
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AA seq
533 aa
AA seq
DB search
MNLLDPFMKMTDEQEKGLSGAPSPTMSDDSAGSPCPSGSGSDTENTRPQENTYPKGEPDL
KKESEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQAEAEEATEQTHISPNAIFKALQADSPHSSSGMSEVHSPGEHSGQSQGPPTPPTT
PKTDAQPGKADLKREGRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVHEFDQYLPP
NGHPGVPVTTHGGQVTYTGSYGISSGGGGAAATGAPGQSQGHVWLSKQQAPPPPPQQQPQ
APQPPQQPPQAPQPPQQPQQQPPPQPQGAPQPPTAHTLTPLSSEPGQAQRTQIKTEQLSP
SHYSEQQHSPQQLAYSPFSLPHYSPAYPPITRAQYDYAAAAAAEHQNSASASYYSHAASQ
GAGLYPTFTYMNPAAQRPMYTPIADPSGVPSIPQTHSPQPWDQQPVYTQLTRP
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctggaccccttcatgaagatgaccgacgagcaggagaagggcctgtccggc
gcccccagccccaccatgtccgacgactcggcgggctccccgtgcccctccggctccggc
tcggacacggagaacacgcggccccaggagaacacgtaccccaaaggcgagccggatttg
aagaaggagagcgaggaggacaagttccccgtgtgcatccgagaggcggtcagccaggtg
ctcaaaggctacgactggaccctggtgcccatgcccgtgcgcgtcaacggctccagcaag
aacaaaccccacgtcaagcgccccatgaacgccttcatggtgtgggcacaggcggcacgc
aggaagctggcggaccagtacccgcacctgcacaacgccgagctcagcaagacgctgggc
aagctctggagattgctgaatgagagcgagaagcgacccttcgtggaggaggcggagagg
ctgcgtgtccagcacaagaaagaccacccggattataagtaccagcctcgccggaggaag
tcggtgaagaacgggcaggcggaggccgaggaggccacggagcagacccacatctccccc
aacgccatcttcaaggcgctgcaggccgactctccacattcctcctccggcatgagcgag
gtgcattcccccggcgagcactccgggcaatcccaaggccccccgacgccccccaccacc
cccaaaaccgacgcgcagccgggcaaagccgacctgaaacgcgaggggcggcccctgcct
gaggggggccggcagcctcccatcgatttccgcgacgtggacatcggcgagctgagcagc
gacgtcatctccaacatcgagaccttcgacgtgcacgaattcgaccagtacctgcccccc
aacggccacccgggggtgcccgtgaccacgcacggcggccaggtcacctacacgggcagc
tacggcatcagcagcggaggcggcggggcagcggccacgggagcgcccggccagagtcag
ggccacgtgtggctctccaagcagcaggcgcccccgccacccccgcagcagcaaccccag
gccccgcagccgccgcaacagcccccgcaggccccgcagccaccgcaacagccgcagcag
cagccgcccccgcagccccagggcgccccgcagcctcccaccgcgcacacgctcaccccg
ctaagcagcgagccgggccaggcgcagcgcacgcagatcaagacggagcagctgagcccc
agccactacagcgagcagcagcattccccgcaacagctggcctacagccctttcagcctc
ccgcactacagccccgcatacccgcccatcacccgcgctcagtacgactacgcggccgcg
gccgccgctgagcaccagaactccgcctctgcctcctactacagccacgcggccagccag
ggcgcggggctctaccccaccttcacctacatgaaccccgcggcgcagcgacccatgtac
accccgatcgccgacccctcgggggtgccgtccatcccgcagacgcacagcccgcagccc
tgggatcagcagcccgtctacacgcagctcacccggccctga
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