Suncus etruscus (white-toothed pygmy shrew): 126003372
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Entry
126003372 CDS
T09902
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
setr05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126003372 (TAF4B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
126003372 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126003372 (TAF4B)
03036 Chromosome and associated proteins [BR:
setr03036
]
126003372 (TAF4B)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126003372 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
126003372 (TAF4B)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
126003372 (TAF4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
126003372
NCBI-ProteinID:
XP_049625512
LinkDB
All DBs
Position
3:154330909..154442498
Genome browser
AA seq
838 aa
AA seq
DB search
MPAGLPQPPPAVSAPGSASMAPAGPPLPGCRPEGARPAPGAAAAAAAAAKAPPARAPLGP
LGVTQVAPPLAGGPQVVAVKAPGAALQLPAGLQLPPGTVLIKSNSGQLMLVSPQQAVTRA
ETSNITSRPAVPTSSTQTVKICTVPNSNSQVVKKVAVAPVNKLAQIGTTVVTTIPKSSSV
QTAAMSTSVVTVTPIKPLMTVTNLKSSSLGVSSINANEPKVKTTAQINLSPTMLENVKKC
KNFLAMLIKLACSGSQSPEMGKSVKKLVEQLLDAKIEAEEFTRQLYIELKSSPQPHLVPF
LKKSVSALRQLMPNAQSFILQCVQQTSSEACIVTCTATPPPVVTTISSVQSEKTSSVSGV
APPRTLSIQTLNPIPGPGGAKTEVVTLDSVGSATVSAGKTTTGTMLVQTPKPLTTSLQNT
VKAVTIQPEKPVVSGAPVTLTLPSVTFGETSAAAVCLPSMKPVVSSPGTTFDKPVVGAPV
QIKLSHPGPILSQPGGIPQTVKVKQLVVQQPSGNITKQVNTLSHSSALTIQKPGQKMQVT
TAIPTSQFPPASILKQITLPGNKILSFQASPIQKNKIKENGTVFFRDEDDINDVTSMAGV
NLNEENACVLATSSELVGRLVQSCKDEPFLLIGALQKRILDIGKKYDITELNSDAVNLIS
HATQERLRGLLEKLTAIAQHRMTTYKANENYILSSDTRSQLKFLEKLDQLEKQRKDLEER
EMLLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQIQQRDANLTALAAIGPRKKRPLEYG
SGSEGLKDNLASGASSLTASKQLLRPRITRICLRDLIFCMEQQREMKYSRELYVALLK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccggcctcccgcagcccccgcccgccgtcagcgcccccgggagcgcgagcatg
gcccccgccggcccgccgctgcccgggtgccggcccgagggcgcccgcccggccccgggc
gccgccgccgccgccgccgccgccgccaaggctccgcccgcgcgcgcccccctgggccct
ctgggggtgacccaggtggcgcccccgctcgccggcggcccccaggtcgtcgccgtgaaa
gcccccggcgccgccctccagctgcccgcgggcctgcagctgcctccaggaacagttttg
atcaaaagtaacagtggtcaattgatgttggtatctcctcagcaagctgtaacaagagct
gagacaagtaacataacttcaaggccagctgtaccaacaagtagtactcaaacagtcaaa
atctgtacagtgccgaattctaattcacaagtagttaagaaagtagcggtggcacctgtt
aacaaattggcacaaataggaactactgtggtaactactattccgaagtcttcctcagta
caaacagcagcaatgtcgaccagtgttgtcacagttacacctataaaaccattgatgact
gtaacaaacctgaagtcctcaagtttgggagtatcatccataaatgcaaatgagcccaag
gtcaaaacaactgctcagattaatctttctccgacaatgctagaaaatgtgaagaaatgt
aagaactttcttgcaatgttaataaaactggcatgtagtgggtcacagtctccagaaatg
gggaagagtgtaaagaaactggtggaacaacttctggatgcaaaaattgaagcagaagaa
tttactagacaactgtacattgaactcaagtcttcacctcagcctcatcttgttcctttt
cttaagaaaagcgtgtcagccttacgacaactcatgcctaacgcccaaagctttattctg
cagtgtgttcagcagacatctagtgaggcttgcattgttacgtgtacagcaacacctcct
cctgtggtgacaacaatttcatcagtccagtctgaaaagacctcgagtgtttctggagta
gcaccacccagaactttgtcaatacaaactctgaatccaattcctggtccaggaggagca
aaaactgaagttgtgacacttgattctgtagggtcagctactgtatcagcaggaaaaaca
accactggaactatgttggttcagactccaaagccacttacgacatcgctccaaaatact
gttaaagcagtcacaattcagcctgaaaagcctgttgtctctggggcaccagtaacacta
actcttccttctgtgacctttggagaaacttcagcagcagcagtttgtcttccatctatg
aaacctgttgtttcttctcctgggaccacatttgacaagcctgttgttggtgctccagtc
cagatcaaactgtcccacccaggccccatcctttcacaaccaggtggcattccacagaca
gttaaagtcaaacaactagtagtccagcagccttcaggaaacattacaaaacaagtgaac
acactttcccattcctcagcattgaccattcagaaacctggacagaagatgcaagttacc
actgcaatacctaccagtcagtttcctccagcttccattctaaagcaaattaccttgcca
ggaaataaaattctgtcatttcaagcgtctcctattcagaaaaataaaataaaagagaat
ggaacagtgttcttcagagatgaagatgacatcaatgatgtgacttctatggcaggtgtc
aaccttaatgaagaaaatgcctgtgtcttagcaacaagctctgaattggttggccgactt
gttcagtcatgtaaagatgaaccattccttctcattggagctttacaaaagaggatttta
gacattggtaaaaaatatgacattacagaacttaattctgatgctgtgaacttgatctcc
catgcaacacaggagcgattacgaggccttctagaaaaactgactgcaattgctcaacat
cggatgacaacttacaaggcaaatgaaaattacatcctgtcaagtgataccaggtcacag
ctaaaatttcttgaaaagctggatcaattggagaagcagagaaaggatttagaagaaaga
gaaatgctacttaaagcagccaagagtcgttctaataaagaagatccagaacaactgaga
ttaaagcagaaagccaaagagttacaacagttggagcttgctcagatacagcagagagat
gccaatctgacagctcttgcagctattggaccaaggaagaagagaccgctggaatatgga
tcaggaagtgagggcttaaaagacaatcttgcttcaggggcatccagcctgacagccagc
aaacagttgcttcgtccaagaatcacaagaatctgcctcagggacttgatattctgtatg
gaacagcaaagggaaatgaagtattcacgagagctctatgttgcccttctgaagtga
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