Suncus etruscus (white-toothed pygmy shrew): 126003569
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Entry
126003569 CDS
T09902
Symbol
PSMC1
Name
(RefSeq) 26S proteasome regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03050
Proteasome
setr05010
Alzheimer disease
setr05012
Parkinson disease
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05017
Spinocerebellar ataxia
setr05020
Prion disease
setr05022
Pathways of neurodegeneration - multiple diseases
setr05165
Human papillomavirus infection
setr05169
Epstein-Barr virus infection
setr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
126003569 (PSMC1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
126003569 (PSMC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
126003569 (PSMC1)
05165 Human papillomavirus infection
126003569 (PSMC1)
09164 Neurodegenerative disease
05010 Alzheimer disease
126003569 (PSMC1)
05012 Parkinson disease
126003569 (PSMC1)
05014 Amyotrophic lateral sclerosis
126003569 (PSMC1)
05016 Huntington disease
126003569 (PSMC1)
05017 Spinocerebellar ataxia
126003569 (PSMC1)
05020 Prion disease
126003569 (PSMC1)
05022 Pathways of neurodegeneration - multiple diseases
126003569 (PSMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
setr03051
]
126003569 (PSMC1)
Proteasome [BR:
setr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
126003569 (PSMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_25
AAA_14
AAA_3
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
AAA_33
AAA_7
AAA_24
Parvo_NS1
NB-ARC
PhoH
NACHT
ABC_tran
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
126003569
NCBI-ProteinID:
XP_049625803
LinkDB
All DBs
Position
3:34466765..34482439
Genome browser
AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcaaagcggtggacatggccctggaggtggcaagaaggatgacaaggac
aagaaaaagaaatatgagcctccagtaccaacacgagtggggaaaaagaagaagaaaaca
aagggaccagatgctgccagcaaactgccactagtgacacctcatactcagtgccggtta
aaattactgaagttagagagaatcaaagactaccttctcatggaggaagagttcattaga
aatcaggaacagatgaaacctttagaagaaaaacaagaggaagagagatcaaaggtggat
gacctgcgagggaccccgatgtccgtgggaaccttggaggaaatcatcgatgacaaccac
gccatcgtatctacgtctgtggggtcagaacactatgtcagcattctctcctttgtggac
aaggacctactggagccaggttgctccgtgctgctgaaccacaaggtgcatgctgtgatc
ggggtgctgatggacgacactgaccccttagtcactgtgatgaaggtggagaaggcaccc
caggagacctatgctgatattgggggcttggacaaccagatccaggaaataaaggaatct
gtggagcttcctctcactcaccctgagtactatgaagagatgggtatcaagccccctaag
ggagtgatcctctatggtccccctggcacaggtaagaccttattagccaaagcagttgca
aatcagacctcggccactttccttcgggtggtcggctcggagctcatccagaagtacctt
ggggatgggcccaagctcgtgcgggagctgtttcgagtggctgaagagcacgcgccgtcc
attgtgttcattgatgaaattgatgccattgggactaaaagatatgactccaattctgga
ggtgaaagagaaattcagagaaccatgttggaactcttgaaccagctggatggatttgac
tcaagaggggatgtgaaagttatcatggctacaaaccgaatagaaactttggatccagca
cttatcaggccaggccgcattgaccggaagatcgagttccccctgcctgatgagaagacc
aagaagcgcatcttccagatccacacgagcaggatgacactagccgatgatgtcaccctg
gatgacttgatcatggctaaagatgacctctctggggccgacatcaaggcaatctgtaca
gaagctggtctgatggccctgagggagcggagaatgaaagtaacaaatgaagatttcaaa
aagtcaaaagaaaatgttctttataaaaagcaagaaggcacccctgaggggctgtatctc
taa
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