Suncus etruscus (white-toothed pygmy shrew): 126003701
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Entry
126003701 CDS
T09902
Symbol
AFG3L2
Name
(RefSeq) AFG3-like protein 2 isoform X1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
126003701 (AFG3L2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126003701 (AFG3L2)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
setr03110
]
126003701 (AFG3L2)
Peptidases and inhibitors [BR:
setr01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
126003701 (AFG3L2)
Chaperones and folding catalysts [BR:
setr03110
]
Other chaperones and cochaperones
AAA proteases
126003701 (AFG3L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_22
AAA_5
AAA_16
RuvB_N
TIP49
nSTAND3
AAA_14
ThcOx
AAA_33
AAA_2
AAA_17
gpW
AAA_28
IstB_IS21
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
126003701
NCBI-ProteinID:
XP_049625988
LinkDB
All DBs
Position
3:138720062..138755610
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AA seq
804 aa
AA seq
DB search
MAHRCLLLWGRGGCWPRGLPPLLVPGRGAGLRGRPCLRTLYRYATTQATASRNSFLTDVI
AVYRRFCSRPPKGFEKYFPNGKNGKKPSEAKEVTGEKKESKPSGTSRPSGGAGGGGKRGG
KKDDSHWWSRFQKGDFPWDDKEFRMYFLWTALFWGGVMFYFLFRSSGREITWKDFVNNYL
SKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENR
VPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVLK
DEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKA
TAGEANVPFITVSGSEFLEMFVGVGPARVRDLFSLARKNAPCILFIDEIDAVGRKRGRGN
FGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDI
KGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLADAI
NEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRG
KGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVAEEIFFGRITTGAQDDLRKVTQSAYAQ
IVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINEAHKRTVALLTEKK
ADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGLKDWN
KEREKEKEETPEEKIANQIQGGSS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccgctgcctgctgctctggggccggggcggctgctggccccgcggcctgccc
ccgctgctcgtgcccggccgtggcgcgggactccgagggcggccctgcctccgcacgctt
taccgatatgctacgactcaggcaacagccagcagaaactcttttttgacagatgtaatt
gctgtttatcgaagattctgttctcgacctccaaaagggtttgaaaaatattttcctaat
ggaaaaaatggaaaaaagcctagtgaagctaaagaagttacaggagaaaaaaaagaatca
aagccatccggtacttcacgcccttctggaggagctgggggtggtggaaaacgaggtggc
aagaaagatgattctcattggtggtccaggtttcagaagggtgactttccatgggatgac
aaagaattcaggatgtactttctctggactgctctcttttggggtggagtcatgttttac
ttcctgttcaggagctcagggagagaaatcacatggaaggactttgtcaataactatctt
tccaaaggagtagtggacagactggaagttgtcaataagcgttttgttcgtgtgactttc
actccaggaaaaacccctgtggatgggcaatatgtctggtttaatattggcagcgtggac
acctttgagcgaaatctggaaactttgcagcaggaattgggcattgaaggggagaaccgg
gttcctgttgtctacatcgctgaaagtgatggttcatttctcctgagcatgttgcccacg
gttctcatcattgctttcttactctacaccatccggagaggacctgctggtattgggcga
acaggccggggcatggggggactcttcagcgttggagaaactactgccaaggtcttgaaa
gacgagatagatgtgaagttcaaagatgtggctggctgtgaggaggccaagctcgagata
atggaatttgtgaatttcttgaaaaacccaaagcagtatcaagacttaggagcaaaaatc
ccaaagggtgccattctcacgggtcctccaggcactggaaaaactctgcttgccaaggcc
acggctggagaagccaatgtgcccttcatcactgtcagtggatctgagttcctggagatg
tttgttggtgtgggcccagctagagttcgagatttgttttcccttgctcgaaagaatgcc
ccttgcattctgtttattgatgaaatagatgctgtgggaaggaagagaggaagaggcaac
tttggggggcagagtgagcaggagaatacactcaatcagctgcttgtggaaatggatggt
tttaatacaacaacaaatgtcgtcattctggcaggcaccaaccgaccggatattctagac
cctgcgctaatgaggcccggccgcttcgataggcagatatttattggaccaccagatata
aagggaagagcctctattttcaaagtccatcttagaccgctaaaattggacagtgcccta
gaaaaggagaaacttgccagaaaacttgcatctttaactcctggattttcaggggctgat
gttgctaatgtctgtaatgaagctgctttgattgctgcaagacacctggcagatgccata
aatgagaaacattttgaacaagcaattgagcgggtgattgggggcttggagaaaaaaact
caggttctgcagcctgaggagaagaagactgtggcttaccatgaggcaggtcatgcagtg
gccggctggtacctagaacatgcggatccacttctgaaggtctccatcatccctcgaggc
aaaggcctgggctatgctcagtatctgcccaaggaacagtacctgtataccaaagagcag
ctccttgacaggatgtgcatgacactgggcggccgggtggctgaagagatcttcttcggg
aggatcacaactggtgcacaggacgacctcaggaaagtcactcagagtgcatatgcacag
attgttcagtttggcatgaatgagaaggtcggacaaatctcctttgatctcccacgtcag
ggggatatggtgttagagaaaccatatagtgaagccactgcaagactgattgatgacgaa
gtccggatacttattaatgaagctcataaaagaacagtagctctcctcacagaaaagaaa
gctgatgtggagaaggttgctcttttactattagaaaaggaagtattagataagaatgat
atggtggaacttttgggaccccgaccgtttgccgagaaatccacctatgaagaatttgtc
gaaggcactggcagcttggacgaagacacttcacttcctgagggcctcaaggactggaat
aaagagagggaaaaagaaaaagaagaaacaccagaagagaaaattgccaaccagatccaa
ggagggtcgtcatag
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