Suncus etruscus (white-toothed pygmy shrew): 126003826
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Entry
126003826 CDS
T09902
Symbol
LSM6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03018
RNA degradation
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126003826 (LSM6)
09123 Folding, sorting and degradation
03018 RNA degradation
126003826 (LSM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126003826 (LSM6)
03041 Spliceosome [BR:
setr03041
]
126003826 (LSM6)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126003826 (LSM6)
mRNA degradation factors
5'-3' decay
Lsm complex
126003826 (LSM6)
Spliceosome [BR:
setr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126003826 (LSM6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
126003826
NCBI-ProteinID:
XP_049626135
LinkDB
All DBs
Position
3:complement(115766572..115778170)
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AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcggaagcaaacccccagtgacttcttaaagcaaatcatcggtcgaccagtt
gtggtcaagttaaattctggagtggattatcgaggggtcctggcttgcctggatggctac
atgaacattgccctggagcagacagaagagtatgtgaacggccagctcaagaacaagtac
ggggatgccttcatccgagggaacaatgtgttgtacataagcacacagaagagaaggatg
tga
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