Suncus etruscus (white-toothed pygmy shrew): 126003861
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Entry
126003861 CDS
T09902
Symbol
DSC1
Name
(RefSeq) desmocollin-1
KO
K07600
desmocollin 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126003861 (DSC1)
Cell adhesion molecules [BR:
setr04515
]
Cadherins
Major cadherins
126003861 (DSC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Cadherin_2
RET_CLD1
Cadherin_CELSR2_9th
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
126003861
NCBI-ProteinID:
XP_049626167
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All DBs
Position
3:complement(159530750..159560138)
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AA seq
846 aa
AA seq
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MAEACAAPGSIFYKQFLFSLLVLVLWCDACQKISLQVPYHLPSGTLVGKVNLKKCLPSVS
LIQSSDPDFSIKEDGSIFTTQDISLSSERKSFSIFLSDSQTLEPKMMEVTLIKRRKEVMK
RRHSRAAEKTLRRSKRRWAPIPCSLMENSLGPFPQHVQQVQSDAAQNYTIFYSISGPGVD
KTPTNLFFIDKDSGDIFCTRSIDREQYQEFPIYAYATTADGYAPEYPLPLVFKVEDDNDN
APYFETKLTVFSIPENCRSGTSVGKVTAIDLDEPDTLHTRLRYKILQQIPDHPKHFSIHP
DTGVITTTTSLLDREKCDTYQLIMEVRDMGGQPFGLFNTGTITISLEDENDNSPYFTETS
YVTEVEENRIDVEILRMMVHDQDLANTPHSKAVYKILHGNENGNFKISTDPNTNEAVLCV
VKALNFESSKEVVLQIGVLNEAQFSKLTNSQSPTMCTTTVTVKVKDADEGPECQPPVRVL
QSRDGLPAGQSLQGYKALDPETRSGKGLKYKKVVDEGNWFEIDEDTGDLKTIKILDRESK
FVKNDQYNISVMAMDADGRSCTGTLVVRLEDFNDHPPQIAKEVTLCQNDVDFAVLKPEDP
DGPDNGPPFQFFLDNSASRLWTLEPRSDGKTAIIRLRQNLESNYYNVPMQIKDRHGVSAR
QMLSVKVCDCSTPSDCKMNAKQRDVNVKPNVILGKWAILAMVLGSALLLCIMFTCFCVTV
QRKVKKCFPEDVAQQNLIVSNTEGPGEEVTEANIRLPTQASNICDTSMSVGTLGGQGIKT
QQSFEMLKGGYTLESNKGGGHQTLESVKGVGQGGMDVGRYTYTDWHSFTQPRLGEESIRG
HTLIKN
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcctgcgctgccccagggagcatcttctataagcagttccttttctctctc
ctggttttagtattatggtgcgatgcttgtcagaaaatttctcttcaggttccttatcat
cttccatctggcacacttgtaggcaaagtgaatctgaagaagtgcctcccatcagtcagc
ctcatccaatccagtgatcctgacttcagcattaaggaagatggctcaatctttaccaca
caggacatcagtttatcttctgaaaggaagagtttctctatttttctttcagacagtcaa
acactagaaccaaaaatgatggaagttacactgataaaaagaagaaaggaggttatgaag
aggagacacagtagagctgcagaaaaaacgcttaggcgcagcaagagacgatgggctcct
ataccgtgttcactgatggagaactcattaggtccatttccacaacatgttcagcaggtt
caatctgatgctgcacagaactatacaatattttattccataagtggaccaggagtagac
aaaacaccaacaaatttgttcttcatagacaaagacagtggggatatcttttgtacaaga
agtattgaccgcgaacaatatcaagagtttccaatatatgcctatgcaaccactgcagat
ggctatgctccagaatacccactgcctttagtattcaaggttgaagatgataatgacaat
gccccatatttcgaaacaaaactgactgttttcagtatccctgaaaattgcaggtctgga
acttcagtgggaaaagtgactgccattgaccttgatgagcctgacactctacatactcgt
ctaagatacaaaatcttacagcaaattccagatcatccaaagcatttctccatacatcca
gatacaggtgtcatcacgaccaccacatctttgctggatagagaaaaatgtgatacttac
cagttaataatggaagtacgagacatgggaggccaaccatttggtttatttaatacagga
acaattactatttctctagaagatgaaaatgacaattcaccatattttacagaaacttct
tatgttacagaagtggaagaaaacagaattgacgttgagattttacgaatgatggtacat
gatcaagatttggcaaacactcctcactcaaaggcagtatacaagatcctgcatggaaat
gaaaatggaaacttcaaaattagcacagacccaaatacaaatgaagctgtcttgtgtgtt
gtcaaggcattaaatttcgaatccagtaaagaagttgttttgcaaattggtgtactcaat
gaagcacagttctctaaattaaccaactctcaaagtcctactatgtgtactactaccgtc
actgtcaaagttaaagatgctgatgagggtcctgagtgccaacctccagtcagagttctt
cagagtagagatggtctccccgctggccaatctcttcagggatacaaagcattggatcca
gaaactcgcagtggcaaaggcttaaagtataagaaagtagttgatgaaggtaattggttt
gaaattgacgaagacactggtgatttgaaaactataaagatactcgatagagaatcaaaa
tttgtaaagaatgaccaatataatatttctgtgatggcaatggatgcagatggcagatct
tgcactggaacattagtagttcgattagaagactttaatgatcaccctcctcagattgca
aaagaagtgacactttgtcagaatgatgtagattttgctgttcttaaaccagaagatcca
gatggacctgataatggcccaccttttcaattctttctggataattctgccagtaggctt
tggaccctagagccaaggagtgacggcaaaactgccattattcgtttacggcaaaatctt
gaaagtaattattataatgtgcctatgcaaataaaagatagacatggtgtttctgcaaga
caaatgttatcagttaaagtatgtgactgctcaactccaagcgactgtaaaatgaatgca
aaacagagagatgtcaatgtcaagccaaacgtaatccttggaaaatgggctattcttgct
atggttctgggttctgctttgttattatgtattatgtttacatgcttctgtgttactgtt
caacgaaaagtaaagaaatgttttccagaagatgtagctcagcaaaatttaattgtatca
aatactgaaggacctggagaagaagttacggaagcaaatattagactccccacacaggca
tccaacatttgtgacacaagcatgtctgttggcactcttggtggccagggaatcaagact
cagcaaagctttgagatgctcaaaggtggctacacattggaatccaacaaaggcggtgga
caccagaccttggaatcggttaagggagtaggacagggaggaatggatgttggcagatac
acatacactgattggcacagcttcactcaacctcggcttggtgaagaatccattagagga
cacactctgattaaaaattaa
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