Suncus etruscus (white-toothed pygmy shrew): 126003911
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Entry
126003911 CDS
T09902
Symbol
TBPL2
Name
(RefSeq) TATA box-binding protein-like 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
setr05016
Huntington disease
setr05017
Spinocerebellar ataxia
setr05165
Human papillomavirus infection
setr05166
Human T-cell leukemia virus 1 infection
setr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126003911 (TBPL2)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
126003911 (TBPL2)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
126003911 (TBPL2)
05165 Human papillomavirus infection
126003911 (TBPL2)
09164 Neurodegenerative disease
05016 Huntington disease
126003911 (TBPL2)
05017 Spinocerebellar ataxia
126003911 (TBPL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126003911 (TBPL2)
03021 Transcription machinery [BR:
setr03021
]
126003911 (TBPL2)
Transcription factors [BR:
setr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
126003911 (TBPL2)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126003911 (TBPL2)
RNA polymerase III system
TFIIIB
126003911 (TBPL2)
RNA polymerase I system
SL1/TIF-1B
126003911 (TBPL2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
126003911
NCBI-ProteinID:
XP_049626197
LinkDB
All DBs
Position
3:complement(192034..236086)
Genome browser
AA seq
437 aa
AA seq
DB search
MEAEDQTYLDLYLDQCAVQDDLTPAESPLLHPLVPYDVDMPHPSNPEIALSSHLEVQETT
GDFSSMDLSFLPDELTQDNQDQAGSNNKPETEENCKICSQPKRSPSSGQQFVSLGLPGSH
LPDPHCHGGRDEADSVPPCTEKPNSLPLIPITPITPMNAVFKCSGMVPQLQNIVSTVNLA
CKLDLKKIALQAKNAEYNPKRFTAVIMRIREPRTTALIFSSGKMVCTGAKSEEESRLATR
KYARVVQKLGFPARFLDFKIQNVVASCDVKFPISLEGLVLTHRQFSSFEPELFPGLIYRM
VKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKSFRKHNPSWFQGKTKSMESESM
NLAWFQHKERLWKEKYQDKRCLLATPAELPSHTRNRGRQSSSKSICVTPKHYFCTQVSDP
QKEFSCSTSLHYSESSQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgaggaccagacgtacctggatctctacctggaccagtgtgctgtccaggat
gatctcactcctgctgagtcacccctgctccatccacttgtgccatatgatgtagacatg
cctcatccatccaatccagagattgcattgagttcacatcttgaagtccaagaaacaact
ggtgatttctcatctatggatcttagcttcctccccgatgaacttactcaagacaatcaa
gaccaggctggcagtaataacaagcctgaaactgaagaaaattgcaaaatttgcagtcag
ccaaagaggtcaccatcatcaggccagcagtttgttagcttgggcttacctggcagccat
ttgcctgatccccactgtcatggaggccgtgatgaggcagactcagttcctccctgtact
gagaaaccaaactccttgcctctgatccccataactcccataacaccaatgaatgctgtt
ttcaaatgttctggaatggtgcctcaactgcaaaatatagtttctactgtaaacctagcc
tgtaaattggatctgaagaaaatagccttgcaggcaaaaaatgcagaatataacccaaag
aggtttactgctgtcataatgaggatccgagagcccaggacaacggccctcatatttagc
tctgggaaaatggtctgcacaggagccaaaagtgaagaagagtctcgacttgcaacaaga
aaatatgcccgtgtggtgcagaagcttggcttccctgccagattcctggattttaaaatt
cagaacgtggttgcgagctgtgatgtgaaatttcccatcagcctggaaggtttggtgttg
acacatcggcagtttagtagttttgaacctgaactatttcctggactaatttatagaatg
gtaaaaccacggattgtactacttatctttgtatctggaaaagttgtgttgacaggtgcc
aaggaacgttctgagatctatgaagcatttgaaaacatctatcctattctaaaaagtttt
aggaagcacaatcctagttggtttcaaggaaagactaaatctatggaatctgaatctatg
aatctggcctggttccaacataaagagcggctttggaaagagaagtaccaggacaaaaga
tgtcttctagccaccccagctgagctgcccagtcacacaagaaacagaggcagacagagc
agcagcaaaagcatctgtgtgactccgaagcattatttttgcacccaggttagtgaccct
caaaaggagttcagctgctccacttcactccactacagtgaatccagtcaatga
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