KEGG   Suncus etruscus (white-toothed pygmy shrew): 126003951
Entry
126003951         CDS       T09902                                 
Symbol
RIOX1
Name
(RefSeq) ribosomal oxygenase 1
  KO
K16914  protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:setr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:setr03009]
    126003951 (RIOX1)
   03036 Chromosome and associated proteins [BR:setr03036]
    126003951 (RIOX1)
Enzymes [BR:setr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     126003951 (RIOX1)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     126003951 (RIOX1)
    1.14.11.79  protein-L-histidine (3S)-3-hydroxylase
     126003951 (RIOX1)
Ribosome biogenesis [BR:setr03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    126003951 (RIOX1)
Chromosome and associated proteins [BR:setr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    126003951 (RIOX1)
SSDB
Motif
Pfam: RIOX1_C_WH JmjC_2 Cupin_8 Cupin_1 Cupin_2
Other DBs
NCBI-GeneID: 126003951
NCBI-ProteinID: XP_049626237
LinkDB
Position
3:17400617..17402305
AA seq 562 aa
MNGLRANGGGGGGGGLLRRGRLRRRRPPPPHSGSVLALPLRPRKIRRQLRRSGAASRGVR
ARTPPPPPSEESEESPPRVEPADGATASASLADAAPSAPPGGDGDSPFRRVLAELQRLPS
SRRRAARLFEWLVAPLPPEHFFRRLWEREAVLVRRQDPAYYAGLFATADLDAALRAGELQ
FGLHLDAARYRHGRRETLHPPGRALPHAAWALYRAGCSLRLLCPQAFSAAVWHVLAVLQA
QFGSMAGANAYLTPPGSQGFAPHYDDIEAFVLQLEGRKRWRVYRPRRAAEELALLPSANL
GPDELGEPVLQAVLEPGDLLYFPRGFVHQAECPDGAHSLHLTLSTYQRNSWGDFLEAALP
LAVQAAVDEDVEFRRGLPRDFMDYMGAQHADSKDPRRAAFAEKVRVLVARLAHFAPLDAV
ADQRARDFIHDSLPPVLTDRERALSVHGLPVRWEAGQPVHAGAQLTTDTQVHMLQDGLAR
LVGEGGRLLLYYTVENSRVYHLEEPKCLEIHPQQADAVELLLRSYPEFVRVGDLPCDSVE
DQLTLATMLYDKGLLLTKMPLS
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgaacgggctccgggcgaacggcggcggcggaggaggtggagggctgctgcggcgcggg
cgactgagacgccgccgcccgcccccgcctcacagcggctcggtgttggctctgccgctg
aggccgcggaagatccggcggcagctgcgccggagcggggcggcgtcgcgcggcgtgagg
gcccgcacgccgccgccgccgccgtcggaagagtcggaggagtcgccgccgcgcgtggag
ccagcggacggcgcgacagcgtcggcgtcgctcgcggacgcggccccctcagcgcctccg
ggcggcgacggggactctccgttccggcgcgtgctggccgagctgcagcgcctccccagc
agccggcggcgggcggcgcgcctgttcgagtggctggtggcgccgctgccgcccgagcac
ttcttccggcgcctgtgggagcgcgaggcggtgctggtgcggcgccaggaccccgcctac
tacgccggcctcttcgccacggccgacctggacgccgcgctgcgcgccggggagctgcag
ttcggcctgcacctggacgcggcgcgctaccgccacggccggcgcgagacgctgcacccg
ccgggccgcgcgctgccgcacgccgcctgggccctgtaccgcgccggctgctcgctgcgc
ctgctgtgcccgcaggccttctcggccgccgtgtggcacgtgctggccgtgctgcaggcc
cagttcggcagcatggcgggcgccaacgcctacctcacgccgcccggctcgcagggcttc
gcgccgcactacgacgacatcgaggccttcgtgctgcagctcgagggccgcaagcggtgg
cgcgtgtaccggccgcgccgcgccgccgaggagctcgcgctgctgcccagcgccaacctc
ggccccgacgagctgggcgagcccgtgctgcaggccgtgctcgagccgggcgacctgctc
tacttcccgcgcggcttcgtgcaccaggccgagtgcccggacggcgcgcactcgctgcac
ctcacgctgtccacctaccagcgcaactcgtggggcgacttcctggaggccgcgctgccg
ctggccgtgcaggcggccgtggacgaggacgtggagttccgccgcggcctgccccgcgac
ttcatggactacatgggcgcgcagcacgccgactccaaggacccgcgccgggccgccttc
gccgagaaggtgcgcgtcctggtggcccgcctggcccacttcgcgcccctggacgccgtg
gccgaccagcgcgccagggacttcatccacgactcgctgccgccggtgctgacggaccgg
gagcgcgcgctcagcgtccacgggctgcccgtgcgctgggaagccggccagcccgtgcac
gcgggggcccagctgacgacggacacgcaggtgcacatgctgcaggacggcctggcccgg
ctcgtcggtgagggcggccgcctgctgctctactacacggtggagaactcgcgggtctac
cacctggaggagcccaagtgcctggagatccacccgcagcaggccgacgccgtggagctc
ctgctgcgctcctacccggagttcgtcagggtcggggacctgccctgcgacagcgtggag
gaccagctgaccctggccaccatgctctacgacaaagggctgctgctcaccaagatgcct
ctcagctga

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