Suncus etruscus (white-toothed pygmy shrew): 126003965
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Entry
126003965 CDS
T09902
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126003965 (SMARCAL1)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
126003965 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
Flavi_DEAD
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
126003965
NCBI-ProteinID:
XP_049626271
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All DBs
Position
1:32876376..32944018
Genome browser
AA seq
935 aa
AA seq
DB search
MSLPLTEEQQKKIEENRQKALARRAEKLLAEQHQSKGRQTLAVKPSQSTQGSSPSLPSVP
FRPRSQGVIFNEPQNLRSSLIADPRPQNSQGLNPSTPQLAKGPWKQPEEMHTACPSHCPP
SQMTLTAISPPLAGSSPEISQQLSGFKVDQVHPQTSYEIQSTPSQSTTHETLGKAKTSCE
TLASCSAEPPKNPDVGAKTTRPSTSGQTVSSIHHVPPTPEGRLQQKGKCIRNGNRFQVVI
GYDAKLIAVFKSLPSRSYDPDTKRWNFSMNDYKALMNAVQHLPTVTLQPLEEAPCNGETQ
SATSASAAAHTQLPPACSLTFVKGKCLLISRTRFEADIGYSKDLIELFKQMKSKIYDVKT
RKWNFLLEEHNMLIECVRLLPQVQLEPLPKTLAQAFASQLKKTCLEADIPDADLSRVDTK
LVSSLLPFQRAGVNFAIAKGGRLLLADDMGLGKTVQAICIAAFYRKEWPLLVVVPSSVRF
TWEQAFLQWLPSLSTDSINVVVTGKDRLAAGLVNIISFDLLSKMEKQLKTSFKVVIIDES
HFLKNSKTARCRAAMPILKMAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPHFHLFGLR
YCDAKRQPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKMVVLAPERMNA
KTRAALDAATKEMTTWDTKQKQKEALFAFFNRTAEAKIPSIIEYILDLLESGKEKFLVFA
HHKVVLDAVTKELDRKDVPHIRIDGSTSSADRETRCQQFQLSERHSVAVLSITAANMGLT
LSAANLVVFAELFWNPGMLIQAEDRVHRIGQTSSVSIHYLVAKGTADDYLWPLIQEKIKV
LGEAGLSEASFSEMTEATDYLYKDPKQQKIYDLFQNSFEEDKEFLLALDSFDSGCASQAS
GSDSQHQKETLDDSTSPKKRRFEFFDNWDSFTNPS
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcctctaacagaggagcagcagaaaaagattgaagaaaatcgacaaaaggct
ctagctcgtagagctgagaaattattagcagaacagcatcagagtaaaggccgtcaaacc
cttgctgtcaaaccttcccagtctactcaaggctcttccccaagtcttcccagtgttcct
tttagacccaggagccagggtgtcatttttaatgaacctcagaacctcagaagttcactt
attgctgacccaagacctcagaattctcaaggccttaatcctagcacaccacaacttgca
aaggggccatggaaacagccagaagagatgcacacagcctgcccaagccactgtccacca
agtcaaatgactctcacagccatttcccctccattggcaggaagctctccagagatcagc
caacagctttcagggttcaaggtagatcaggttcatccccagacttcttatgagatccag
tcaacaccttctcagagcacaactcatgagactttaggcaaagccaaaacatcatgtgag
acactagcttcatgctctgcagagcctcccaagaaccctgatgtaggagccaagacaaca
agaccatcaacatcagggcagactgtttccagcatccatcatgtgccccccacgccagaa
gggagactccaacagaagggaaaatgcataagaaatggaaatcggtttcaggtggtgatt
ggctatgatgccaagctcattgcagtgtttaagagtttgcccagcagaagttatgatcct
gacaccaagagatggaacttcagcatgaatgactacaaagccctgatgaatgcagtacaa
caccttccgaccgtcaccttgcagcctttggaagaggctccctgcaatggggagacccaa
tcagccaccagtgccagcgctgcagcccacacccaactgcctcctgcctgctcactcacc
tttgtcaaagggaagtgcctgctcatttccaggacacgattcgaggcagatattggctat
tcaaaagacctgattgaactctttaaacagatgaagtccaagatttacgatgtcaagacc
aggaaatggaactttctgttggaggagcacaatatgttaattgaatgtgtgcgcctcctc
ccacaagttcagctggaacctttgcctaagacgttagcccaggccttcgcctctcagctg
aagaagacatgtttggaagcagacattcctgacgcagacctttccagagtggacaccaag
cttgtgtctagcctactgccctttcagagagctggagtcaatttcgccatagccaaagga
ggccgcctgctcctggctgacgacatgggcctgggcaagaccgtccaagccatctgcatc
gccgccttttaccggaaggagtggccactgctggtggtggtgccatcttctgtgcgcttc
acctgggagcaggccttccttcagtggctgccatctctgagcacagacagcatcaacgta
gtggtgacaggaaaggaccgtctggctgctggcctggtcaatatcatcagttttgacctt
ttgagcaagatggaaaagcaactgaaaacctctttcaaagtggtcatcatcgatgaatcc
cacttcctcaagaacagtaagactgctcgctgtcgtgcagccatgcctatcctcaagatg
gccaagagggtgatcttactgtcaggcacaccagccatgtcccggcctgcagagctctac
acgcagatcattgctgtcaagcccacgtttttcccgcacttccatctcttcggacttcgc
tactgtgatgccaagcggcagccctggggatgggactactcaggctcctccaatttaggg
gagctgaaacttctgctggaggaggcggtgatgctgcgccgcctcaagagtgacgtcctc
tctcagctcccagccaagcagcgcaagatggtggtgttggcccccgaacggatgaatgcc
aagaccagagctgccctcgatgctgccaccaaggaaatgaccacctgggacactaaacag
aagcagaaagaagccctctttgccttcttcaacaggacagctgaagccaaaatcccatct
atcattgagtacatcctggaccttttggaaagcgggaaagagaagtttctggtgtttgca
caccataaggtggtgttggatgcagtcactaaagaacttgacagaaaggatgtgccacac
atccgcatcgatggttccacctcctcagctgaccgtgagactcggtgccagcagttccag
ctgtctgagaggcactctgtggctgtgctgtccattactgccgccaacatgggcctcacc
ttatccgcagcaaacctggtggtgttcgcagagctcttttggaacccagggatgctgatc
caggcagaggaccgtgtacaccgcattggccagacgagctctgtgagcatccactacctg
gtggcgaaaggcacagcagatgactacctgtggcccctgattcaagaaaagattaaagtg
ctgggtgaagctggcctttctgaagccagtttttctgaaatgacagaagccactgattac
ctgtataaggacccaaagcagcagaagatctatgacctttttcagaattcctttgaagaa
gacaaagagttcctgctggctttggattcctttgactccggatgtgcttcacaagcatct
ggaagtgattcccagcaccagaaagaaacgttggatgatagtacctcaccaaagaaaagg
agatttgaattttttgataactgggacagttttacaaatccctcataa
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