Suncus etruscus (white-toothed pygmy shrew): 126003979
Help
Entry
126003979 CDS
T09902
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04510
Focal adhesion
setr04520
Adherens junction
setr04530
Tight junction
setr04670
Leukocyte transendothelial migration
setr04810
Regulation of actin cytoskeleton
setr05146
Amoebiasis
setr05203
Viral carcinogenesis
setr05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126003979 (ACTN1)
04520 Adherens junction
126003979 (ACTN1)
04530 Tight junction
126003979 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
126003979 (ACTN1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
126003979 (ACTN1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
126003979 (ACTN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
126003979 (ACTN1)
09163 Immune disease
05322 Systemic lupus erythematosus
126003979 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126003979 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126003979 (ACTN1)
04147 Exosome [BR:
setr04147
]
126003979 (ACTN1)
Membrane trafficking [BR:
setr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126003979 (ACTN1)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
126003979 (ACTN1)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126003979 (ACTN1)
Exosomal proteins of colorectal cancer cells
126003979 (ACTN1)
Exosomal proteins of bladder cancer cells
126003979 (ACTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_8
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
XisI
Motif
Other DBs
NCBI-GeneID:
126003979
NCBI-ProteinID:
XP_049626289
LinkDB
All DBs
Position
3:complement(13111304..13220998)
Genome browser
AA seq
914 aa
AA seq
DB search
MDHYDSSQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
VPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM
VSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTEGKEAMLRQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVTKIVQTYHVNMAGTNPYTTITPLEI
NGKWDHVRQLVPRRDQALTEEHTRQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDPQKKTGMMDTDDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSR
ETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYAGPDAVPGALD
YMSFSTALYGESDL
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggaccattatgactcctcgcaaaccaacgactacatgcagcccgaagaggactgggac
cgggacctgctgctggacccggcgtgggagaagcagcagagaaagacatttacagcctgg
tgcaactcccacctccgcaaagctgggacgcagattgagaacattgaggaggacttccgg
gatggcctgaagctcatgttgctgctggaggtcatctcaggtgagcgcttggccaagcca
gagagaggcaaaatgcgggtgcacaagatctccaacgtcaacaaggccctggacttcatc
gccagcaagggcgtcaagctggtgtccattggagcggaggaaattgtggatggaaacgtc
aaaatgaccctgggcatgatctggaccatcatccttcgatttgccattcaggacatctct
gtggaagagacgtctgcaaaggaagggctgctactatggtgtcagaggaagacagcccca
tacaagaacgtcaacattcagaacttccacataagctggaaggatggcctcggcttctgt
gccttgatccaccgacaccggcctgagctcatagactatggaaagctgaggaaggacgat
cctctcacaaacctcaacacagcttttgatgtggctgagaagtacctggacatccccaag
atgttggatgcagaagacatcgtgggaaccgcccgtccggatgagaaggccatcatgact
tacgtgtccagcttctaccacgccttctcgggagcccagaaggcggagacagcagccaac
cgtatctgcaaggtgttggccgtaaaccaggagaacgagcagctcatggaagactatgag
aaactggccagcgatctgttggagtggatccgccgcaccatcccctggctggagaaccgg
gtgcccgagaacaccatgcacgccatgcagcagaagctggaggacttccgcgactaccgg
cgcctgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacg
ctgcagaccaagctgcgcctcagcaaccggcccgccttcatgccctccgagggcaggatg
gtctcggacatcaacaacgcctggggctgcctggagcaggctgagaagggctacgaggaa
tggctgctgaatgagatccggaggctggagcggctcgaccacctggcggagaagttccgg
cagaaggcgtccatccatgaggcctggacagaaggcaaggaagcgatgctgcgacagaag
gactatgagacggccaccctgtcggagatcaaggccctcctcaagaagcatgaggccttt
gagagtgacctggctgcccaccaggaccgcgtggagcagattgcggccattgctcaagaa
ctcaatgagctggactattacgactcacccagtgtcaacgcccggtgccaaaagatctgt
gaccagtgggacaatctgggggccctcacccagaagcggagggaagctctggagcggaca
gagaaactgctggagaccattgatcagctgtacttggagtatgccaagcgggccgcaccc
ttcaacaactggatggagggggccatggaggacctgcaggacaccttcatcgtccacacc
atcgaggagatccagggactgaccacagcccatgagcagttcaaagccaccctccctgat
gctgacaaggagcgcctggccatcctgggcattcacaacgaggtgaccaagattgtgcag
acctaccacgtcaacatggcgggcaccaacccctatacaaccatcacacctctggagatc
aatggcaaatgggaccatgtgcggcagctggtgccacggagggaccaggcactgacagag
gaacacacccgccagcaacacaacgagaggctacgcaagcagttcggggcccaggccaat
gtcattggaccctggatccagaccaagatggaggagattggcaggatctccattgagatg
cacggcacactggaggatcagctcagccatctgcggcagtacgagaagagcatcgtcaac
tacaagccaaagattgaccagctggagggcgaccaccagctcatccaggaggcacttatt
ttcgacaacaagcacactaactacaccatggagcacatccgtgtgggctgggaacagctc
ctcaccaccatcgccaggaccatcaatgaggtggagaaccagattctgacccgggatgcc
aagggcatcagccaggaacagatgaatgagttccgggcctccttcaaccactttgaccgg
gatcactccggcacgctgggtcccgaggagttcaaagcctgcctcatcagcttgggttat
gatattggcaacgacccccagaagaagacaggcatgatggatacggatgatttccgggcc
tgccttatctccatgggttacaacatgggagaggccgaatttgcccgtatcatgagcatc
gtggaccccaaccgcctaggggtggtgacgttccaagccttcatcgactttatgtcccgt
gagacggctgacacagacacggccgaccaagtcatggcttccttcaagatcctggctgga
gacaagaactatatcacagtggacgagctacgccgagaactgccacctgaccaggccgag
tactgcatcgcacgaatggcgccctacgctggccccgacgccgtgcccggtgctctggac
tatatgtccttctccacggcgctgtacggagagagtgacctctaa
DBGET
integrated database retrieval system
