KEGG   Suncus etruscus (white-toothed pygmy shrew): 126003986
Entry
126003986         CDS       T09902                                 
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04066  HIF-1 signaling pathway
setr04137  Mitophagy - animal
setr04140  Autophagy - animal
setr04148  Efferocytosis
setr04659  Th17 cell differentiation
setr04919  Thyroid hormone signaling pathway
setr05167  Kaposi sarcoma-associated herpesvirus infection
setr05200  Pathways in cancer
setr05205  Proteoglycans in cancer
setr05208  Chemical carcinogenesis - reactive oxygen species
setr05211  Renal cell carcinoma
setr05230  Central carbon metabolism in cancer
setr05231  Choline metabolism in cancer
setr05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:setr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    126003986 (HIF1A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    126003986 (HIF1A)
   04137 Mitophagy - animal
    126003986 (HIF1A)
   04148 Efferocytosis
    126003986 (HIF1A)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    126003986 (HIF1A)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    126003986 (HIF1A)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126003986 (HIF1A)
   05205 Proteoglycans in cancer
    126003986 (HIF1A)
   05208 Chemical carcinogenesis - reactive oxygen species
    126003986 (HIF1A)
   05230 Central carbon metabolism in cancer
    126003986 (HIF1A)
   05231 Choline metabolism in cancer
    126003986 (HIF1A)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    126003986 (HIF1A)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    126003986 (HIF1A)
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    126003986 (HIF1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:setr03000]
    126003986 (HIF1A)
Transcription factors [BR:setr03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    126003986 (HIF1A)
SSDB
Motif
Pfam: bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 HLH DDRGK
Other DBs
NCBI-GeneID: 126003986
NCBI-ProteinID: XP_049626309
LinkDB
Position
3:6278458..6328698
AA seq 821 aa
MEGAPGAHDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYM
GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIHVYDTNNNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTECI
LKPVESSDMKITQLFTKVESEDTSCLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTET
DDQQLEEAPLYNDVMLPSSSEKLQSINLALSPSPASETPKPLRSNADPALNQEVALKLEP
NPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNEFKLELVEKLF
AEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSTTSPQSASTISVFQ
TTQMPEPALTTPTTDELKAVTKDGMEDIKVLVASPSPTHTPKETTSATTSPYSNTRSRTA
SPNSAGNGVIEQTEKSHPRSPNVLSVTLSQSVPDEELNPKILALQNAQRKRKIEPDGSLF
QAVGIVSLKGTLIQQPDDRTATTSLSWKRVKGCKTSEQNGVEQKTIILIPSDLACRLLGQ
SMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq 2466 nt   +upstreamnt  +downstreamnt
atggagggcgcgccgggcgcccacgacaagaagaagataagttctgaacgtcgaaaagaa
aagtctagagatgctgccagatctcgtcgaagtaaagaatctgaagttttttacgaactt
gctcatcagttgccacttccccataacgtgagctcacaccttgataaagcttctgttatg
aggcttaccatcagctatttacgtgtgaggaaacttctggatgctggtgatttggatatt
gaagatgaaatgaaggcacagatgaattgtttttatttgaaagctttggatggttttgta
atggttctcacagatgatggtgacatgatttatatttctgataatgtgaacaagtacatg
ggattaactcagtttgaactaactggacacagtgtatttgactttactcatccatgtgac
catgaggaaatgagagaaatgcttacacacagaaatggcccggtgaaaaagggtaaggag
caaaacacacagagaagtttttttctgagaatgaagtgtaccctaactagccgagggagg
actatgaacataaagtcggcaacatggaaggtactacattgcacaggccatattcatgtg
tatgataccaataacaaccagtctcagtgtgggtataaaaaaccacccatgacgtgtttg
gtgctgatttgtgaacctattcctcatccatcaaatattgagattcctttagacagcaag
acttttctcagtcgtcacagcctggatatgaaattttcttattgtgatgaaagaattact
gaattgatgggatatgagccagaagaacttttgggcaggtcaatatatgaatattatcat
gctttggactctgatcatttaaccaaaactcaccatgatatgtttactaaaggacaagtc
accacaggacagtacaggatgcttgcgaaaagaggtggttacgtttgggttgaaactcaa
gcaactgtcatatataacaccaagaactctcaaccacaatgcattgtatgtgtcaattat
gttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacggaatgtatc
ctcaaaccagtggaatcttcagatatgaaaataacccagctatttaccaaagttgaatca
gaagacacgagttgcctgtttgacaaactgaagaaggagcctgatgctttgactttactg
gcaccagctgctggagatacgatcatatctttggattttggcagcaatgatacagaaact
gatgaccaacaacttgaagaagctccattatataatgatgtgatgctcccttcatccagt
gaaaaattacagagtattaatttggcactgtctccatcacctgcttcagaaactccgaag
ccacttcgaagtaacgctgaccctgcactcaaccaggaagttgcattaaaactagaacca
aaccctgaatcattagaactctctttcacaatgccccagattcaagatcagcctgccagt
ccttctgatggaagcactagacaaagttcacctgagcctaacagccctagtgaatattgt
tttgatgtggatagtgatatggtcaatgaattcaaattggaattggtggagaagcttttt
gctgaagacacagaagcaaagaatccattttccactcaggatactgacttagacttggag
atgctggccccctatatcccaatggatgatgacttccagttacgttccttcgaccagctg
tctccattggaaagcagcacgacaagtcctcagagtgcaagcacaatttcagtattccag
acaactcaaatgccagaacctgctcttaccactcccactactgatgagttaaaagcagtg
actaaagatggtatggaagacattaaagtactggttgcatctccatctcctacccataca
cctaaagaaactactagtgccacaacctcaccatatagtaatactcgaagtcgaacagct
tcaccaaacagtgcaggcaatggagtcatagaacagacagaaaaatctcatccaagaagc
cctaatgtgttatctgtcactttgagtcaaagtgttcctgacgaagaactaaatccaaag
atactggctttgcaaaatgctcagagaaaacgaaaaatagaacccgacggttcacttttt
caagcagtaggaattgtaagtctgaaaggaacattaatacagcaaccagatgaccgaaca
gctactacatcactttcctggaaacgagtaaaaggatgcaaaaccagtgaacaaaatgga
gtggagcagaagacaattattttaataccctctgatttagcatgtcgattgctggggcag
tccatggatgagagtggattaccacagctgaccagttacgattgtgaagtcaatgcacct
attcaaggcagcaggaacctactgcagggtgaagaattactcagagctttggatcaagtt
aactga

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