Suncus etruscus (white-toothed pygmy shrew): 126004000
Help
Entry
126004000 CDS
T09902
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04390
Hippo signaling pathway
setr04530
Tight junction
setr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
126004000 (PALS1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
126004000 (PALS1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
126004000 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
setr04990
]
126004000 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
setr04990
]
PDZ domain-containing proteins
MAGUK family proteins
126004000 (PALS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
126004000
NCBI-ProteinID:
XP_049626329
LinkDB
All DBs
Position
3:11489455..11546056
Genome browser
AA seq
677 aa
AA seq
DB search
MTMTTSHMNGHVTEESDSEVKSVDLASPEEPQKHREMAVDCPGDLGTRMMPVRRSAQLER
IRQQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNPIFDTEEGIILESPHYA
VKILEVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQNAFKIHNAVSVHMNKASP
PFPIIANAQDLAQEVQTVLKPVHQKEGQELTALLNTPHIQALLLAHDKVAEQEMQLEPIT
DERVYESIGQYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEG
DEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPPAKETVIHVKAHFDYDP
SDDPYVPCRELGLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREA
MKQTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANR
KRPIVLIGPQNCGQNELRQRLMNKEKDRFAAAVPHTTRSRRDHEVAGRDYLFVSRQAFEA
DVAAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLHTQSLKILRNSDLKPYIIFIA
PPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRL
INKLDTEPQWVPSTWLR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgacaacatcccatatgaatgggcatgtcactgaggagtcagacagtgaagta
aaaagtgtggatcttgcgtcacccgaggaacctcagaagcaccgagaaatggctgttgac
tgccctggagacctgggcaccaggatgatgcccgtccgtcgaagtgcccagctggagcgc
attcggcagcaacaggaagacatgcgacgtcggcgggaggaagaagggaaaaagcaagaa
ctggacctaaattcctccatgagacttaaaaaactagcccagattcctccaaagactggc
atagataaccctatattcgataccgaagaaggaattatcttagaaagccctcattatgct
gtgaaaatattagaagtggaagacctgttttcttcactcaaacacatccaacatactttg
gtagattctcaaagccaggaggatatttcgctgcttttacaacttgtacagaataaagat
ttccagaatgcatttaagatacacaacgctgtctcagtccatatgaacaaggccagtcct
ccattccctattatcgccaatgcacaagatcttgcgcaagaggtacaaactgttttgaaa
ccagtccaccagaaagaaggacaagaattaactgcactactgaatactccacacattcag
gcacttttactggctcatgataaggtggctgagcaggaaatgcagttggagcccatcaca
gatgagagagtgtatgagagcattggtcagtatggaggagaaactgtaaaaatagttcgt
atagaaaaggctcgagatattcctttgggagctacagttcgtaatgaaatggattctgtc
atcattagtcggatcgtcaaaggaggtgctgctgaaaaaagtggcctgttgcacgaagga
gatgaagttctggagattaatggcattgaaatccgggggaaagatgtcaatgaggttttt
gacttgttgtctgatatgcatgggactttgacatttgttctgattcccagtcaacaaatt
aaacctcctcctgccaaggaaacagttatccatgtcaaagctcattttgactatgaccca
tccgatgacccttatgttccatgtcgggagttgggtctctcttttcaaaagggggatata
cttcatgtgatcagtcaagaagacccaaactggtggcaagcctacagggaaggagatgaa
gataaccagcctcttgctgggctagtaccagggaaaagttttcaacagcaaagggaagcc
atgaagcaaacgatagaagaagataaggagccagaaaaatcaggaaaactctggtgtgca
aagaaaaataaaaagaagagaaaaaaggttttatataatgccaataaaaatgatgattat
gacaacgaggagatcttaacttatgaagaaatgtcactttaccatcagccagcaaatagg
aaaagaccaatcgttttaattggtccgcagaactgcggccagaatgaattgcgtcagaga
ctcatgaataaagaaaaagaccgctttgcagccgcagttcctcataccactcgcagtagg
cgagaccatgaagtagccggtcgagattatctctttgtttcccgacaagcatttgaggcg
gacgtagcagcaggaaagttcattgagcatggtgaattcgaaaaaaatttgtacggaacc
agcattgattctgtgcgccaagtgatcaactctgggaaaatatgcctcttaagccttcat
acacagtcactgaagatactccggaattcagacttgaaaccctatatcatcttcattgca
cctccttcacaagaaagacttcgggctctattggccaaagaaggcaagaatccaaagcct
gaagagttgagagaaattattgagaagactagagagatggaacagaacaatggccattac
tttgacacagcaattgtgaattcagatcttgataaagcctatcaagaattgcttaggtta
atcaacaaactcgatactgaacctcagtgggtgccttccacttggctacggtga
DBGET
integrated database retrieval system
