Suncus etruscus (white-toothed pygmy shrew): 126004066
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Entry
126004066 CDS
T09902
Symbol
MNAT1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
setr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126004066 (MNAT1)
09124 Replication and repair
03420 Nucleotide excision repair
126004066 (MNAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126004066 (MNAT1)
03400 DNA repair and recombination proteins [BR:
setr03400
]
126004066 (MNAT1)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126004066 (MNAT1)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126004066 (MNAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_2
TRAF3_RING
zf-C3HC4_2
zf-UDP
TRAF6_Z2
PFIN
zf-P11
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
126004066
NCBI-ProteinID:
XP_049626430
LinkDB
All DBs
Position
3:5251999..5445734
Genome browser
AA seq
309 aa
AA seq
DB search
MEDQGCPRCKTTKYRNPALKLMVNVCGHTLCESCVDLLFVRGAGNCPECNIPLRKNNFRI
QLFEDPIVDKEVDIRKKVLKIYNKREEDFPTLREYNDFLEEVEEIVFNLTNNVDLENTRK
KMDIYQKENKDVIQKNKLKLTVEQEELNEALEAERQEYEQRRINIRKEEQLQQILKRKNK
QAFLDELESSDLPVALLLAQHKDRSTQVETEVEKPKPSKPVTFSTGIKMGQQIPLTPVQM
LEEALYEYQPLKIETCGPQVPELEVLGRLGYLNHVRAASPQDLAGGYTSSLACRRALQDA
FSGLFWQAS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccagggctgcccgcgctgcaagaccaccaagtaccgcaacccggcgctcaag
ctcatggtcaacgtgtgcggacacacgctgtgtgaaagttgtgtggatttgctgtttgtg
agaggagctgggaactgtccagagtgtaacattccacttagaaaaaacaacttcaggata
caactctttgaagatcctatagttgataaagaggttgatatccggaagaaagtgctaaag
atatacaataaaagagaagaagactttcctactctgagagaatataatgatttcctggaa
gaagtggaagaaatcgttttcaacttgaccaacaacgtggatttggaaaacaccagaaag
aaaatggacatataccaaaaggaaaacaaagatgtcattcagaaaaataagttaaagctg
actgtagaacaggaagaactgaatgaagctttggaggcagaacgacaggaatatgagcaa
agaagaattaatatacggaaagaagaacaactccaacagattctaaaaaggaagaataaa
caggcgtttttagatgaattggagagttctgatctccctgttgctttacttttggctcag
cacaaagatagatctacccaggtggaaacggaagttgagaagccgaaaccttcaaaacca
gtgacattttccacaggcatcaaaatgggacagcaaattccattaacacctgtacaaatg
cttgaagaagctctatatgaataccagccattgaaaatagagacctgtgggccacaagtt
cctgagctggaggtgctaggaagacttgggtatttaaaccacgtgagagccgcttcaccc
caggaccttgcaggaggctatacttcttctcttgcctgtcgcagagcactgcaggatgca
ttcagtgggcttttttggcaggccagttaa
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