Suncus etruscus (white-toothed pygmy shrew): 126004126
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Entry
126004126 CDS
T09902
Symbol
MLH3
Name
(RefSeq) DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126004126 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
setr03400
]
126004126 (MLH3)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
126004126 (MLH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
126004126
NCBI-ProteinID:
XP_049626491
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Position
3:complement(19017163..19050447)
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AA seq
1445 aa
AA seq
DB search
MIKCLSAEVQSKLRSGLAICSLGQCVEELVLNSVDAEARCVAVRVNLETFQVQVIDNGMG
LGSDDLDKVGYRYFTSKCNSIQDLENPRFFGFRGEALASIADMASAVEISSRKNETMKTF
IKLFQNGKALKVSEADLTRPSAGTTVIIYNLFYQLPVRRKCMDPRLEFEKVRQRIEALSL
MQPSISFSLRNDITGSMVLQLPKTKDICSRFCQIYGLSKSQNLREINFKYNEFELSGYIS
SEAHYNKNMQFLFVNKRLVLRTKLHKLIGFLLRKESVICKPKSGSASRQVNSSPRQRSNP
ELHGIYIINLQCQFCEYDVCLEPAKTLIEFQDWDSLLICIQEGIKMFLKKEKLFMELSGE
DIKEFSEENDFSLFSATLQKHVPSNEKSNQISFQEACNDILDSYEMFNLQSKAVKRKAPL
ENTDAQNCKDSETQRKNTSDSFSYACETEIPSQSQMTEPSSPSEDRSCSENCIVSQTTAE
ASEPGKNEENENTHFEPNSSENPCRASSKMCVSPWQRTYHFEDSGEDLEIQKVNTTIHDT
TVNILKTNRIQNQLERHKKATDLACQPLPFETLLRECGTQRETEKSKKEAGNYGRINVFS
CGQVKLSSTGFITHVVQNEQHKPMETQLFFKNSVLSEPVSERFASRTRHSVATSNIPDLT
STFSHEFAQLPNTQLFQANTSFGQEKKTKSTYTDFAVSQTGSKNTNTDGLFPDTSSFPLC
RNVSNGSKKTSTLTGSFKTINRKKLSLNAQLGSLEKFKRQYGKVRNHLSTQVEQNDFEIT
TNVNQINSDAPQRDKNYIDASCTHELTTVKQGDSTSCQQVSKIPDSDEFLSSREKDYWKQ
QMPYLGESLTTPQELPQDNGKTVDAEKSPKSLASKLSKMKSSERENPTIKMSHSEEFAQL
DSSRKDGDLCDGVTLSSQLLTNELERNESHIVEMSDSVTQGNSFCKVSEPHADSNPLENS
VIPELPSVSTSNNNDAFNSAASGIVSQQIPGPNSSKRMFVSHVEDLTADHIGTCIQMEQS
IARTYSETEDSNTRSLEWQQHFDLVLGRMVYINKMTGLSTFVEPTEDVQAACTQDLTTMA
VDVRLENGSQYRCHPFRSDLVLPFLPRSREERSVMRQTNRDALGDAAGSDSLQSLFSEWS
NPVFARYPEVAVDVSSGQAESLAVKIHNILYPYRFTKDMIHSMQVLQQVDNKFIACLMST
KTEENAGEGGNLLVLVDQHAAHERIRLEQLINDSYEKQPRSSNRKKLLSSTISPPLEITV
TEEQRRLLQCYHENLEDLGLEILFPDTSDSLVLVGKVPLCFVEREASELRRGRSTVTKSI
VEELLREQVELLQTTGSIQGTLPLTVQKVLASQACHGAIKFNDGLSREESYRLMEALSWC
QLPFQCAHGRPSMLPLADMNHLEQEKQMKPNLAKLRKMAQAWHLFGKAEGCASGFKAHLP
SCEPP
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtgcttgtcagctgaagtgcagtctaagctgcgctctgggttggccatatgc
tccctgggccagtgtgtcgaagagcttgtcctcaacagtgttgatgctgaagcgagatgt
gtggctgtccgggtgaatctcgaaaccttccaagttcaagtgatagacaatggcatgggc
ttggggagtgatgatctagacaaggtgggatatcggtatttcaccagtaaatgcaactcc
atacaggacttggagaacccaaggttttttggtttccgaggagaggccttggcaagcata
gctgacatggccagtgctgtggaaatttcttccaggaaaaatgagacaatgaagactttc
atcaaactatttcagaatggaaaagccctgaaagttagtgaagctgacttgaccagacca
agtgctggaaccacagtaatcatatataatctcttttaccagttgcctgtaaggaggaag
tgcatggatcccagactggagtttgagaaggtcagacagaggatagaggcgctctcattg
atgcagccttccatttctttttctttgagaaacgacattaccgggtccatggttcttcaa
ctccccaaaaccaaagatatatgttcccgcttctgtcaaatttacggactgagtaagtct
caaaatttaagagaaatcaattttaaatataatgaatttgagcttagtggttatattagc
tcggaagcacattacaataagaatatgcagtttttgtttgtgaataaaaggttggtttta
aggacaaagttgcacaagctcattggctttttattaagaaaagaaagtgtcatatgcaag
ccaaagagtggctctgccagtaggcaagtgaattcaagccctcggcagcgatctaaccca
gaactccacgggatatatatcatcaatctgcagtgccaattctgtgagtatgatgtgtgc
ttggagccagcaaaaactctgattgagtttcaggactgggacagtcttttgatttgcatc
caagagggcataaaaatgtttctaaagaaagaaaagttatttatggaattgtcaggtgag
gacattaaggagttcagtgaagagaatgattttagcttatttagtgctacacttcagaag
catgtaccttcgaatgaaaagagtaatcagatcagtttccaagaggcatgtaatgatata
ttggattcctatgaaatgtttaatctgcaatccaaagctgtgaagagaaaagcccctcta
gaaaatacagatgcacaaaattgtaaggattcggaaacccaaagaaaaaacacaagtgat
tcattttcctatgcttgtgaaacagagatcccaagccagagtcaaatgacagagccatca
tcaccaagtgaggataggtcttgctcagaaaattgtatcgtcagccaaacaacagctgaa
gcttcagaaccaggaaaaaatgaggaaaatgaaaacactcactttgagcctaactcttca
gaaaacccatgtagagccagctcaaaaatgtgtgtgagcccttggcagagaacataccac
tttgaggacagtggagaagatctagaaatacagaaagtcaacactactattcatgacacg
actgtcaacatcctgaaaaccaacagaattcagaatcaactagagagacataaaaaggct
acggacttggcatgccagccgctgccttttgagacattattgagagaatgtggtactcag
agagagacagagaaaagtaagaaagaagctggtaattatggaagaataaatgtttttagc
tgtggacaagttaaattatcttctactggcttcataactcacgtggtgcaaaatgaacaa
cataaaccaatggaaacacaacttttctttaaaaactctgttctgtctgaacctgtgagt
gagagatttgcaagtagaacacgtcattcggtggcgacttcaaacatcccagatttaacc
agcacttttagtcatgaatttgctcagctgcccaatacacagcttttccaagcaaataca
agctttgggcaagagaaaaagacgaaatcaacatacacagattttgcagtttctcaaaca
ggtagcaaaaatacaaacacagatggcttatttcctgacacatcctctttccctttgtgt
agaaatgtttcaaatggtagtaagaaaacaagtacattaacaggttcctttaaaaccatt
aaccgtaaaaaactgagcttgaatgcacaactgggatctttagagaagtttaaaaggcaa
tatgggaaggttagaaatcatctaagtactcaagtggagcaaaatgattttgagatcact
accaatgtcaatcaaatcaattctgatgccccccagagagacaaaaattacatagatgcg
tcttgcactcatgaactcactactgtgaaacagggtgattcaactagttgtcaacaagtg
agtaagattcctgattcagacgagtttctctcttccagggaaaaagactattggaaacaa
caaatgccttacttaggagaaagtcttacaactccgcaggaattacctcaggataacgga
aaaactgtagatgctgaaaagtcacccaaatcactagcctccaaattatccaagatgaaa
agttctgaaagagagaatcccacaataaagatgagtcattcggaggagtttgcacaattg
gattccagtaggaaagacggcgatttgtgcgatggggtaaccctgagttctcagttactt
acaaatgaacttgaaagaaatgagagtcacattgtggaaatgtcagactctgtcacgcag
ggtaattccttttgtaaagttagtgagccacatgctgacagcaatccattagagaactct
gtgataccagaacttccttcagtatcaacctctaataacaatgatgcatttaatagcgca
gcttcaggaatagtttcacaacagatcccaggtcccaattcttccaaaagaatgtttgtg
agtcacgtggaagacctcacagctgaccacattggaacatgcattcagatggagcagtct
atagcaaggacttattcagaaactgaggactcaaacacacgttctctggaatggcagcag
cattttgatctggtcttgggaagaatggtttacatcaacaaaatgacaggacttagcacg
ttcgtcgaacctactgaggatgtgcaggctgcttgtacacaagacctgaccaccatggca
gtcgatgtcaggctagagaatggatctcagtacaggtgtcatccttttagaagtgacctc
gttcttccttttcttccaagatctcgggaagagaggtctgtgatgagacagactaacaga
gatgccctaggggatgcggctggtagtgactcgcttcagtctttgttctcagaatggagc
aatcctgtatttgcccgttatccggaggttgctgttgatgtgagcagtggccaggctgag
agtttagcagttaaaatccacaacattctgtatccctatcgtttcaccaaagacatgatc
cattcaatgcaggttcttcagcaagtggataacaagtttattgcctgtttaatgagcact
aagactgaagagaatgctggagaaggtgggaacttgctggtcctggtggatcagcatgca
gcacatgagcgcatccgtctggagcaactcattaatgattcttatgagaaacaaccgcga
agctctaatcggaaaaagttactgtcttccactataagtccccccctggaaataacagtg
acagaggaacaaaggagactcttacagtgctaccatgaaaatctggaagatctgggtctt
gaaattctatttccagacacaagtgattccctggtcctggtaggcaaagtacccctgtgt
tttgttgagagagaggccagtgaacttcgaagaggaaggtccactgtgaccaagagtatc
gtggaggagttacttcgagaacaagtagagctccttcagaccactggcagcatccagggg
actttgcctctgaccgtccagaaggtgctggcatcccaagcctgccatggggccattaaa
tttaacgacggcctgagccgagaggagagctatcgccttatggaagctctgtcctggtgc
cagctgcctttccagtgtgcccatgggagaccctccatgttgccactagcggacatgaac
catttggagcaggaaaagcagatgaaacccaatctggcgaaacttcgtaaaatggcgcaa
gcctggcatctctttggaaaagcagaaggatgtgcttcaggctttaaggcccatctgcct
tcttgcgaaccaccatga
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