Suncus etruscus (white-toothed pygmy shrew): 126004167
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Entry
126004167 CDS
T09902
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
126004167 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126004167 (NFASC)
Cell adhesion molecules [BR:
setr04515
]
Immunoglobulin superfamily
L1 family
126004167 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
126004167
NCBI-ProteinID:
XP_049626543
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All DBs
Position
3:complement(64773828..64955960)
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AA seq
1465 aa
AA seq
DB search
MRRLAARGAAGAAGRTDCTRGRSPSPRRLINLCTIGGSRVFLPTAGWQAAWFAVTKRKLN
EAEKVSGAILCPCKLTSIGKAEELEQPEVVRPCRRGSSEQEQVPRMARQPPPWLCTATGI
LCLLSLGAAIEIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFQW
TRNSRFFNIAKDPRVSMKRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQ
VSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGYNG
DLYFSNVLLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPFNDSSLRNHPDIYSARG
VAERTPSFMYPQGTASSQMVLRGMDLLLECIASGIPTPDIAWYKKGGDLPSHKAKLENFN
KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVC
RANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLL
ANAFVSVLDVPPRMLLPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNY
RVHENGSLEIERTRQEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRAPEDQTVARGST
VQLECRVKHDPSLRLSISWLKDDEPLHIIGSRIKKEEDSLTIFGVAERDQGSYTCVASTE
LDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWVPGDDNNSP
ITDYVVQFEEDQFQPGVWHDHSKFPGSVNSAILQLSPYVNYQFRVIAINEVGSSHPSLPS
ERYRTSGAAPESNPTDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWH
NVTVWGSRYVVSQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTDVRIRVL
NSTAISLQWNRVYSDTVQGHLREYRAYFWRESSLLKNLWVSQKRQQASFPGDRPRGTVSR
LFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETIHLEWDHPEH
PNGIVIGYTLKYLAFNGTKLGKQMVENFSPNQTKFMVRRADPVSRYRFTLSARTQVGSGE
AVTEESPASPNEAAPTAAPPTLAPTTLGATGALSSTEATATAATTEATTVPVVPTVAPTA
ATTTAATTTTTVAATTTERPPSTTRTEIHEPAPDEQSIWNVTVLPNSKWANITWKHNFGP
GTDFVVEYIDSNHTKKTVAVKAQAQPIQLTDLFPGMTYTLRVYSRDNEGISSTAITFMTS
TAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPK
EEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVK
KDKEETEGNESSEATSPVNAIYSLA
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggctggcggcgagaggtgctgcaggggccgcgggccgcaccgactgcactcgg
ggccggagcccgagcccccgcaggctgatcaacttatgcacaattgggggctccagagtc
ttccttcccacggcaggctggcaggcagcctggtttgcagtcaccaagaggaagctgaat
gaagcagagaaggtgagtggggctatcttgtgcccctgcaagctgacctctattgggaag
gctgaggagttggagcagccagaggtggtcagaccctgcaggcgggggagcagcgagcag
gagcaggtacccaggatggcccggcagccaccaccctggctctgcactgccactggcatc
ctctgcctcctcagcctgggtgcggccattgaaatccccatggaccccagcattcagaac
gagctgtcgcagcctcccacaatcaccaagcagtctgtgaaggaccacatcgtggacccc
cgagataacatcctgatcgagtgtgaagcaaaagggaatcctgcccctagcttccagtgg
actcgcaacagcaggttctttaacatcgccaaggacccgcgtgtgtcaatgaagaggcgc
tccgggactctggtgatcgactttcgcagcggcggcaggcctgaggagtacgagggcgag
taccagtgttttgcccgcaacaagttcggcacagccctgtctaaccgcatccgcctgcag
gtgtccaaatctcccttgtggcccaaggaaaacttagaccctgtggtggtccaggaaggt
gcgcccttgactctgcaatgcaaccccccgcccggactgccctcccccgtcatcttctgg
atgagcagctccatggagcccatcacacaggacaagcgtgtttcccagggctataatgga
gacctgtacttctccaacgtgttgctgcaggacatgcagacagactacagctgcaatgca
cgcttccacttcacccacaccatccagcagaagaaccccttcaccctcaaggtcctcacc
aaccacccttttaatgactcgtccttaagaaaccaccctgacatttacagtgcccgcgga
gtcgcagaaagaacacccagcttcatgtatccccagggcactgcaagcagccagatggtg
ctgcgtggcatggacctcctgctagagtgcatcgcttctgggatcccaacaccagacatc
gcctggtacaagaaagggggagacctgccatctcacaaggccaagttggagaactttaac
aaggctctacgcatcactaatgtctccgaggaggactctggggagtatttctgcctggcc
tccaacaagatgggcagcattcggcacacgatctcggtgagagtaaaggctgccccctac
tggctagatgaacccaagaatctgatcctggctcctggggaggatggcaggctggtgtgt
cgtgccaacgggaatcccaagcccacggtgcagtggatggtgaatggggagcctttgcag
tcggcaccccccaacccaaaccgtgaagtggcaggagacaccatcatcttcagggacacc
cagatcagcagcagggctgtgtaccagtgtaatacatccaacgagcatggctacctgctg
gccaatgcctttgtcagcgtgctggatgttcctcctcggatgttgttgccccggaaccag
ctgatccgagtgatcctttacaatcggacacggctcgactgtccattctttgggtcccca
atccccacactccgctggtttaagaatgggcaagggagtaatctggacgggggcaactac
cgcgtgcacgagaatggcagcctggagattgaaaggacccgtcaggaggaccagggcatc
tacacctgcgtggccaccaacatcctgggcaaagccgaaaaccaggtccgcctggaggtc
aaagaccccacaaggatcttccgggcgccagaggaccagacggtggcacggggaagcact
gtgcagctggaatgtcgcgtgaagcatgacccctcactgaggctttccatatcctggttg
aaggacgatgagccactccacatcatcggaagcagaataaagaaggaagaagactccctg
accatctttggtgtggctgaacgagaccagggcagctatacctgtgtagccagcacagag
ctggaccaggaccttgccaaggcctacctcaccgtgctagctgatcaggctactccaact
aaccgtttggctgccctgcccaaaggacggccagaccgaccacgcgacttggagctcaca
gacctagctgagaggagtgtgcggctaacctgggtccctggggatgacaacaacagcccc
atcacagactatgttgtccagtttgaagaagaccagttccagccaggggtctggcatgac
cattccaagttccctggcagtgtcaactcagccatcctccagctgtccccttatgtcaac
tatcagttccgggtcatcgccatcaacgaggtcgggagcagccaccccagccttccatct
gagcgctaccggaccagtggggcagccccagagtctaaccccaccgatgtgaagggagag
ggaactcggaagaacaatatggaaatcacatggacgcccatgaatgccacatctgccttc
ggccccaatctgcgctacatcgtcaagtggcgccggagagagactcgtgagacctggcac
aatgtcaccgtgtggggctcccgctacgtggtgagccagaccccagtctatgtgccctac
gagattcgagtccaggccgaaaatgactttggaaagggtcctgagccagacactatcatt
ggctactcaggagaagattatcccagggctgcgcccactgatgttagaatccgggtcctc
aacagtacggccatcagtctgcagtggaaccgcgtctactccgacacggtccagggccat
ctcagagagtaccgagcctacttctggagggagagcagcttgctgaagaacctatgggtg
tctcagaagagacaacaggccagcttccctggtgaccgcccccgcggcacggtgtcccgc
ctcttcccctacagtaactacaagctggagatggttgtagtcaatggcagaggcgatggg
cctcgcagtgagaccaaggaattcaccacccctgagggagtacccagtgcccccaggcgt
ttccgagtccggcagccgaacctggagaccatccatctggagtgggatcacccagagcac
cccaatggaattgtgatcggatacactctgaaatacctggcctttaatggtaccaaactg
ggaaagcaaatggtggaaaacttttctcccaaccagaccaaattcatggtgcgaagggca
gatcctgtgtcccgctatcgcttcacactcagtgccaggacacaggtgggctccggggag
gctgtcactgaggagtccccagcctccccgaatgaagctgctccaaccgcagctcctccc
accttggccccaactaccctgggtgctacaggtgccttgagcagtactgaggctactgcc
actgccgctaccaccgaagccaccacagtccccgtcgtcccaactgttgcacctaccgct
gccaccactactgctgccaccactacaaccaccgtcgctgccaccaccacggagaggcct
ccctccaccaccaggactgagatacacgaacctgcccccgatgaacagtccatatggaac
gtcacggtgctccccaacagtaaatgggccaacatcacctggaagcacaatttcgggcct
ggaactgactttgtggttgagtacattgacagcaaccatacgaaaaaaactgtcgctgtt
aaggcccaggcccagcctatacagctaacagatctctttcccgggatgacgtacacgttg
cgagtttattcccgggacaacgagggcatcagcagtaccgccatcacctttatgaccagt
acagcttacaccaacaaccaggctgacatcgccacccagggctggttcatcgggctcatg
tgtgccatcgcactccttgttctgatcctgctcattgtctgcttcatcaagaggagtcga
gggggcaagtacccagtgagagaaaagaaggatgttcccttgggcccggaggatcccaaa
gaagaggacggctcctttgactacagtgacgaggacaacaagcccctgcagggcagccag
acatccctggacggcaccatcaagcagcaggagagtgatgacagcctggtggactatggt
gagggaggcgaaggccaattcaatgaggacggctccttcattggccagtacactgtgaag
aaggacaaggaggagacagagggcaacgagagctcagaggccacatcccccgtcaatgcc
atctactctttggcctga
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integrated database retrieval system
