Suncus etruscus (white-toothed pygmy shrew): 126004172
Help
Entry
126004172 CDS
T09902
Symbol
PPFIA4
Name
(RefSeq) liprin-alpha-4
KO
K26226
liprin-alpha
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126004172 (PPFIA4)
Membrane trafficking [BR:
setr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126004172 (PPFIA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Dehydrin
Motif
Other DBs
NCBI-GeneID:
126004172
NCBI-ProteinID:
XP_049626575
LinkDB
All DBs
Position
3:complement(66618011..66665266)
Genome browser
AA seq
1202 aa
AA seq
DB search
MCEVMPTINEGDPMGPPHGAEADANFEQLMVNMLDEREKLLESLRESQETLVATQSRLQE
ALHERDQLQRHLNSALPQEFTTLTRELSMCREQLLEREEEISELKAERNNTRLLLEHLEC
LVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVG
TLEEELAGAHRQVSALQQGTGLRDGVSEEEGTMELGPKRLWKEDAGRVEELQELLEKQNF
ELSQTRDRLVTLTAAVAELEEDLGTARRDLIKSEELSSKHQRDLREALAQKEDMEERITT
LEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLEVAEQKLQQTMRK
AETLPEVEAELAQRIAALTKAEERHGNIEEHLRQLEGQLEEKNQELARVRQREKMNEDHN
KRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLIQELESSQRQIEEQHHHKGRLSEEI
EKLRQEVDQLKGRGGPFVDGPHSRSHLGSAAEVRFSLGTTSHGPPSLHRRYSALREGSAK
DWESSSLPGVLASTATPAFDSDPEISDVDEDEPGGLVGSVDAVSPGGHSDAQTLAMMLQE
QLDAINEEIRMIQEEKESTELRAEEIETRVTSGSMEALNLTQLRKRASIPTSLTALSLAS
TSPALSGRSTPKLTSRSAAQDLDRMGVMTLPSDLRKHRRKLLSPVSREENREDKATIKCE
TSPPSSPRTLRLEKLGHPALSQEEGKSMLEDQGSNPSSSSSSQDSLHKGARRKGIKSSIG
RLFGKKDKGRLIQLSRDGSTGQVLLTDSELSLQEPLVPAKLGTQAEKDRRLKKKHQLLED
ARRKGTPFAQWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISN
ALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMETLATSAKTDSEEGSWAQTL
AYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRASL
QYGIMCLKRLNYDRKELEKRREESQHEIKDVLVWTNDQVVHWVQSIGLRDYAGNLHESGV
HGALLALDENFDHNTLALVLQIPTQNTQARQVMEREFNNLLALGTDRKLDDGEDKVFRRA
PSWRKRFRPREQHGGLLSASAETLPAGFRVAPLGSLPPAPKKLLPEAHSHYLYGHMLSAF
RD
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaggtgatgcccacaatcaatgagggggaccccatggggcccccacatggtgcc
gaggctgatgccaactttgagcagctgatggtgaatatgctggacgagcgggagaagctg
ctggaatccctgcgtgagagccaggagaccctggtggccacccagagccggctgcaggag
gccctgcacgagcgtgaccagctccaacgccacctcaactcagccctgccccaggaattc
accaccttaacccgggagctgagcatgtgtcgggagcagcttctagagcgggaggaagag
atatcggagctgaaggcggagcggaataacaccaggttacttctggaacatttggaatgc
ctggtatcccgccacgagcggtcactgcggatgactgtggtgaagcgtcaggcccagtcc
ccttctggggtctccagtgaggtggaggtgctgaaggccctcaagtcattgttcgagcac
cacaaggccctggatgagaaggtgcgagagaggctcagggcagccctggagcgagttggc
accttggaagaagagctggcaggggcacaccggcaggtgtctgcgctgcagcaggggaca
ggccttcgggatggagtgtcagaagaggaggggaccatggagctgggcccaaaacgcctg
tggaaggaggacgcaggccgcgtagaggagctgcaggagctgctggagaagcagaacttt
gagttgagccagacacgggatcggctggtcactctgacagcggctgtggcggagcttgag
gaggacctgggcacagctcgccgggacctcatcaagtcggaggaactgagcagcaaacat
cagcgggaccttcgtgaggctctggcccagaaggaggacatggaggagagaatcaccaca
ctggagaagcgttacctggctgctcagcgggaggccacgtccatccatgacctcaacgac
aagctggagaatgagctggccaataaagagtccctgcaccgccagtgtgaggagaaggct
cggcacctccaggagctgctggaggtggcagagcagaagctgcagcagacgatgcgcaag
gcggagacgctgcctgaggtggaggccgagttggcacagagaattgcagcccttaccaag
gctgaggagcggcacggcaacatcgaggagcacctgaggcagttggaggggcagctggaa
gaaaagaaccaggagctggccagggtgcgccagcgggagaagatgaacgaggaccacaat
aagcggctgtcagacactgtggaccggctgctgagcgagtccaatgagcgcctgcagctc
caccttaaggaacgcatggcggccttggaggagaagaacaccttgatccaggagctggag
agctcccagcggcagatcgaggagcagcaccatcacaagggccgcctgtctgaagagatt
gaaaaactgcgccaagaggtggaccagctgaagggtcgaggggggccgtttgtggatggc
cctcactccaggtcccatctgggcagtgcagcagaagtgcgcttctccctgggcaccacc
tcccatgggccccccagtctgcaccggcgctactcggcgcttcgggaagggtctgccaag
gattgggagtcctcttcactgcctggggtgctggcctcgactgccacccctgcctttgac
agtgacccagagatctccgatgtggatgaggatgagccagggggtcttgtgggctctgtg
gatgcagtctctcctggcggccactcggatgcccagaccctggccatgatgctgcaggag
cagcttgatgccatcaatgaggagataagaatgatccaggaggagaaggagtctacggag
ctccgtgcggaggagattgagacgcgggtgacaagcggcagcatggaggccctcaacctg
acgcagctgcgcaagcgtgcctccatccccacctccctgactgccctgtccctggccagc
acgtccccagccctcagcggtcgctccaccccgaagctcacctctcgaagtgctgcccag
gacctggaccgcatgggggtcatgactctgcccagtgacttacggaagcacaggaggaag
ctgctgtcaccagtgtctcgggaagagaaccgagaggataaagccaccataaaatgtgag
acttcccctccttcctcacccaggacgctgcggctagagaagcttggccacccagccctg
agccaggaagaaggcaagagcatgctggaggatcaagggagcaaccccagcagcagcagc
agcagccaggactccctgcacaagggtgccaggcgcaagggcatcaagtcatccatcggt
cgcctatttgggaagaaggacaagggccgactcatccagttgagccgcgatggatccacg
ggccaagttctgcttacagactccgagctcagcctgcaggagcccctcgtgcctgccaag
ctggggacccaagcagagaaggaccggaggctgaagaagaagcaccagctgcttgaagat
gcccgcaggaaagggacgccctttgcccagtgggatggccccacggtggtctcttggctt
gagctctgggtgggcatgcctgcctggtatgtggcggcctgccgggccaatgtcaagagc
ggtgccatcatgtcggcactgtcggacacagagatccagcgtgagatcggcatcagcaat
gccctacacaggctcaagctgagactggccatccaggagatggtgtctctgaccagccca
tctgcaccacccacctctaggacctcttctggaaacgtctgggtcacccatgaagagatg
gaaactctggcaacgtctgctaaaacagacagtgaggagggcagctgggctcagaccctg
gcctacggggacatgaaccacgagtggattggcaacgagtggctgcccagcctggggctc
ccccagtaccgcagctacttcatggagtgcctggtagacgcacgcatgctggatcacctc
accaagaaggacctccgagtccacctgaagatggtggacagcttccaccgagccagtctt
cagtacggcataatgtgtctgaagaggctgaattacgaccggaaagagctggagaagagg
cgggaggaaagccagcatgagatcaaggatgtgctggtctggaccaatgatcaggtggtc
cactgggtacagtccatcgggctccgggattatgcggggaacctgcacgagagtggagtg
catggagccctgctggccctggacgagaactttgaccacaacacgctggctctggtcctt
cagatccccacacagaacactcaggcacgccaggtgatggagagagaattcaacaacctg
ctggccttgggcactgaccggaagttggatgatggggaggacaaggtgttccgcagagcg
ccctcctggaggaaacgcttcaggccgcgggagcagcacggcggcctgctcagcgcctcg
gccgagaccctgcccgccggcttccgcgtggccccgctcgggtctctgccgcccgcgccc
aagaagctgctgccggaagctcactcccactatctctacggacacatgctctctgccttc
cgcgactag
DBGET
integrated database retrieval system
