Suncus etruscus (white-toothed pygmy shrew): 126004173
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Entry
126004173 CDS
T09902
Symbol
CNTN2
Name
(RefSeq) contactin-2 isoform X1
KO
K06760
contactin 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
126004173 (CNTN2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126004173 (CNTN2)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
setr00537
]
126004173 (CNTN2)
Cell adhesion molecules [BR:
setr04515
]
Immunoglobulin superfamily
Contactins
126004173 (CNTN2)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
setr00537
]
Others
126004173 (CNTN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
C2-set_2
Sp38
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
126004173
NCBI-ProteinID:
XP_049626576
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Position
3:complement(64729334..64754295)
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AA seq
1117 aa
AA seq
DB search
MRRCCSDWDAHTHGAQGPQQRRAGRKAGPRAPPRAAPICPSRHPDFTSVPSQPLPAPCPK
DPTPAMGTPSGRKSHLLPMVIVALVLFTAQNSAQGGPTTFGPVFEEQPLSLLFPEESTEE
KVTLTCRARANPPATYRWKMNGTELNLEPGSRHQLVGGNLAIMRPSKAQDSGVYQCLASN
PVGTVLSREAVLRFGFLQEFSKEERGPVKTHEGWGVMLPCDPPAHYPGLSYRWLLNEFPN
FIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHLDFSTKSVFSKFAQLNLAAGDTR
LFAPTIKARFPAETYALLGQQVTLECFAFGNPVPRIKWRKVEGSLTPQWAGAEPTLQIPS
VTFADEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLQWGCAAAGKPR
PTVRWLRNGEPLASQNRVEVQAGDLRFSKLSLQDSGMYQCVAENKHGTVYASAELAVQAL
APDFRLNPVRRLIPAARGGEVTIPCQPRAAPKATVLWSKGTEILGNNSRVTVTSEGTLVI
RNISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGANLTLQCHASHD
PTMDLTFTWALDGFAIDIDKPGAHYRRASSKETVGDLTLLNAQLRHGGKYTCTAQTVVDS
VSKEATVLIRGPPGPPGGVVVRNIEDTTVQLSWSRGFDNHSPIAKYTLQARSLPGGKWKP
VRTNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPS
GLSGGGGAPGELIINWTPMAREYQNGDGFGYLLSFRRQGDASWQSTRVPGASAQHFVYSN
DSIRPYTPFEVKIRSYNRLGVGPESLTSIVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEP
VQQDVNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVTGLHPNTKYHVTVQAYNRAG
TGPASPSDSIQTMKSPPRQPPGNISWTFSSSSLSIKWDPVVPQRNESAVTGYKMLYQNDL
HPRPTLHLTSKNWIEIAVPEEIGHALVQIRTTGPGGDGVPAEVHIVRNGGTASPTGPRGQ
QPGLIPSKTTPEGGQGIQETCLPPPNHLAPCSLHTCP
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcggagatgctgcagtgactgggacgcgcacacacacggcgcgcagggaccgcagcag
aggcgagcagggaggaaggcaggcccgcgggctccgccgagggcagcgcccatctgcccc
agccgacaccctgatttcacctcagtaccctcccagcctctgcctgcaccctgccctaag
gatccaacacctgccatggggacaccttctgggagaaagtcacacctgctgcctatggtc
atcgtggcccttgtcctgttcacagctcagaactcagcccaggggggcccgaccaccttt
gggcctgtctttgaagagcagcccctgagtttgctgttcccagaagagtccacagaggag
aaggtgacgctgacatgccgcgcacgtgccaaccctccagccacctacaggtggaagatg
aatggcacggagctgaacctggagccaggttctcgtcaccagctggtgggtggcaacctg
gccatcatgaggcccagcaaggctcaggattcgggggtgtaccagtgcctggcctccaac
ccagtgggcaccgtgctcagcagggaggctgtgcttcgctttggctttctgcaggaattc
tccaaggaggagcggggccctgtgaagacacatgaaggttggggggtgatgctaccctgt
gaccctcctgcccactacccaggtctctcctatcgctggctcctcaatgagtttcccaac
ttcatccccacggacgggcgacactttgtgtcccagaccacggggaacctgtacatcgct
cgcaccaatgcctcagatcttggcaattactcgtgcctggccaccagccacctggacttc
tccaccaagagcgtcttcagcaaattcgctcaactcaacctggcagctggagacacccgt
ctctttgcacccaccatcaaggcccgcttccctgcagagacctacgcactactgggccag
caggtcaccctggagtgctttgcctttgggaatcctgtgcccagaatcaagtggcgcaaa
gtagaaggctctttgaccccacaatgggccggggccgagcccaccctgcagatccccagc
gtcacctttgcagacgagggcacctacgagtgtgaagcggaaaactccaaaggccgagac
actgtgcagggccgcatcattgtgcaagctcagccagagtggctcaaagtgatctcagac
acggaggctgacatcggatccaacctgcaatggggctgtgcggccgcaggcaagccccgg
cccacagtgcgctggctgcggaacggggagcctctggcctcccagaaccgtgtggaggta
caagccggtgacctgcgattctccaagctgagcctgcaggactcgggcatgtaccagtgc
gttgccgagaataagcatggcaccgtctatgcgagcgcagaactggctgtgcaagcactg
gctcctgatttcaggctgaatcctgtaaggcgcctgatccctgcagcccgaggtggggag
gtcactatcccctgccagccccgggcagcaccgaaggccacagtgctctggagtaaaggc
actgagattctgggcaacaacagcagagtgacggtcacttcggagggcacgttggtgatc
aggaacattagtcggtcggatgaaggcaaatacacctgctttgcggagaacttcatgggc
aaagccaacagcacgggcatcctttctgttcgagatgccaccaagatcacactggccccc
tcaagcgctgacatcaacctgggcgctaacctgaccctgcagtgccacgcctctcatgac
cccaccatggacctcactttcacctgggccctagacggcttcgccattgacatcgataag
cccggggcccattaccgtcgggccagctcaaaggagactgtgggtgatctcaccctcctg
aacgcgcagctgcgccatggtggaaagtacacgtgcacagcccagacggtagtggacagt
gtgtccaaggaggccaccgtactgattcgaggtcctccagggcccccagggggcgtggtg
gtgaggaacatcgaagacaccactgtgcagctcagctggagccgtggcttcgacaaccat
agccccattgccaagtacacgctgcaagcgcgcagccttcccggggggaagtggaagcct
gtccgcaccaatcctgccaacatcgagggcaatgccgagactgcccaggtgctgggcctc
actccctggatggactatgagttccgggttttagccagcaacatcctgggcactggggag
cccagtgggccttccagcaaaatcaggaccaaggaagcagccccctcggtggccccctcg
ggactcagtggaggtggcggagcccctggtgagctaatcatcaactggacgcccatggcc
cgggagtaccagaatggagacggattcggctacctgctgtccttccgcaggcagggtgat
gccagctggcagagcacccgggtgcctggtgccagtgcccagcactttgtatacagcaac
gacagcatccggccttacacacccttcgaggtcaagattcgcagctacaaccgcctcggg
gtggggcctgagagcctcacttcgatcgtgtactcggctgaggaagagcccagggtggcc
ccaaccaaagtctgggccaagggggtctcctcctcggaaatgaacgtgacatgggagccc
gtgcagcaggacgtcaacggcatcctcctgggctatgagattcgatactggaaagctgga
gacaaggaggcagctgctgaccgcgtgagaacagcagggctagacaccagcgcccgggtc
actggcctgcaccccaacaccaagtaccatgtgaccgttcaagcctacaaccgggctggc
actgggcctgccagtccctctgacagcattcagaccatgaaatcccctccacgacaacct
ccaggcaacatttcctggaccttctcaagctccagtctcagtatcaagtgggatccggtg
gttccacagcgcaatgagtctgcggtcaccggctataagatgctgtaccagaatgacctg
cacccaaggcctacactccacctcaccagtaaaaactggatcgaaattgcagtccctgag
gagatcgggcatgccctggtgcagatcaggaccacagggcctggaggggatggggtccca
gccgaagtccacattgtgaggaatggaggtacggcttcccccactggccccaggggtcag
caaccaggactcattccttccaagacaaccccagagggagggcagggcatacaagaaaca
tgtttgccacccccaaaccaccttgccccctgctcactgcacacctgcccttga
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