Suncus etruscus (white-toothed pygmy shrew): 126004313
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Entry
126004313 CDS
T09902
Symbol
TAF1A
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126004313 (TAF1A)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
126004313 (TAF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
GLTSCR1
COG4_N
Motif
Other DBs
NCBI-GeneID:
126004313
NCBI-ProteinID:
XP_049626726
LinkDB
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Position
3:complement(52734564..52759441)
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AA seq
445 aa
AA seq
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MSDFSEELFTPSAKDEACVQSEMGMCLPWLQKHIEAVETGGKMEKDFAQTTNACLGFIQE
ALLKHQWQHAAEYMQSYLQILEDSDGNKRLVAPEIIWTLGSEILYYHPKSNVETFSNFAD
RMKNIGVMNYLKISLQHALYLVHHGMLEDASRILSQAETWRYGEKSSSQEVLIHLVQAYK
GLLQYHSWSKKKMELSQLDEDDYAYNTASQNMRNSSWKTSMNFGSLIQIPGVWDPFVKSY
VEMLDFYGDRDGAREVLTNYAYDEKFPSNPNAHIYLYNFLKREKAPREKLISVLKILYQI
VPSHTLMLEFHRLLRKSGKEEHHKLGLEVLFGVLDFAGCTKNITAWKYLAKCLRHTLMED
HLAWVEEEWNSRKSWWPNFHFSLFWAKSDWKEEKTLACEKALVAGILLGKGCRYFRYISK
QDHQILKKKIKQMKKLVKKFSIVNL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttcagtgaagagttgttcacaccatcagccaaggatgaggcgtgtgtgcaa
tctgaaatgggaatgtgtcttccttggctccaaaagcatattgaagctgtggaaactgga
ggcaaaatggaaaaggattttgctcagacgacaaatgcctgtttgggttttattcaagaa
gctctgctgaagcaccagtggcagcacgctgcagagtacatgcagagctacttacagatc
ctggaagattctgacggcaacaaaaggctggtcgctcctgagattatctggacgcttgga
agtgaaattctctattatcatcctaaaagcaatgtggagacttttagtaattttgctgac
cggatgaaaaatattggtgtcatgaattacttaaagatctccttacagcatgcactctac
ttggtgcatcatggcatgcttgaggatgcaagcaggattctcagccaggcggagacatgg
cggtatggggagaagtcgtcttcccaggaagtcctaatccatctcgttcaagcttataaa
gggcttttgcagtatcattcttggtctaaaaagaagatggaattatctcagcttgatgag
gatgattatgcttataacactgcttcccagaatatgcgcaacagtagctggaagacatct
atgaactttggttcattgattcaaattcctggagtttgggatccttttgtgaaaagttat
gtggagatgctggatttctatggggatcgagatggagcccgagaggtactcacgaattac
gcctatgatgaaaaatttccgtccaatcccaatgcccatatctacctctacaacttccta
aagagagagaaggcgccaagagagaaactgataagtgtgctcaagattttatatcagatt
gtaccatctcatactctgatgttagaattccatagattactgagaaaatcaggaaaagaa
gaacatcataaactggggctggaagtcttgtttggagtcttagattttgctgggtgcacg
aaaaacataactgcctggaaatatttggcaaaatgcctcagacacaccttaatggaggat
cacttggcctgggttgaagaagagtggaactccaggaagagttggtggccaaactttcac
ttcagcttgttctgggcaaaaagtgattggaaggaggagaaaacattggcttgtgagaaa
gctctggtagctggaatattgttaggaaaaggttgtagatattttcgctatatttcaaaa
caagatcatcaaatcttaaagaagaaaatcaaacagatgaagaaattagtgaaaaagttt
agtattgtaaatctatga
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