Suncus etruscus (white-toothed pygmy shrew): 126004372
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Entry
126004372 CDS
T09902
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
126004372 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126004372 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
setr03310
]
126004372 (RORB)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
126004372 (RORB)
Nuclear receptors [BR:
setr03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
126004372 (RORB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
126004372
NCBI-ProteinID:
XP_049626771
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Position
3:complement(79812306..79906291)
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AA seq
511 aa
AA seq
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MCENELKTKADATAQIEVIPCKICGDKSSGIHYGVITCEGCKVRDFECCQRAVLASGVHV
TAAVTSFKGLPMDLVLAADRRISGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQ
KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALARVYSSSISN
GLSNLNNEASGTYANGHVIDLPKSEGYYSVDSGQPSPDQSGLDMTGIKQIKQEPIYDLTS
VPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIK
AYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMC
RAFNPLNNTVLFEGKYGGMQMFKSLGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLI
SPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDEILAKLIAKIPTITAVCNLHGEKLQ
VFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaacgaacttaaaactaaagctgatgccactgcacaaattgaagtgatacca
tgcaaaatctgtggcgataagtcctctgggatccactatggagtcatcacttgtgaaggc
tgcaaggtacgggactttgaatgctgccaaagggctgtgcttgcctctggggtccatgtg
actgctgcagtgacgtcttttaaaggactgccaatggatcttgtgcttgctgcagacagg
agaatttctgggttcttcagaaggagccagcaaaacaatgcctcttactcttgcccaagg
cagagaaactgtttaattgacagaaccaacagaaaccgttgccaacattgccgactgcaa
aagtgtcttgccctaggaatgtccagagatgctgtgaaattcggcaggatgtccaagaag
caaagagacagtctgtatgctgaagtgcaaaagcaccagcagcggctgcaggagcaacgg
caacagcagagtggagaagcggaagccctggccagggtgtatagcagcagcatcagtaat
gggctaagcaacctgaacaacgaggccagcggcacttatgccaatggacatgtcattgat
ctgcccaagtcagagggttattacagcgtggattctggccagccatctcctgatcaatca
ggactcgacatgactggaatcaaacagataaagcaagaacctatctatgacctcacatca
gtccccaacttgtttacctatagctctttcaacaatgggcagttagcaccagggataaca
atgactgaaatcgatcgaattgcacagaacatcatcaagtcccatctggagacatgtcag
tacaccatggaagaactccaccagctggcatggcagacgcatacctatgaagaaatcaaa
gcatatcaaagcaagtccagggaagcactgtggcagcaatgtgctatccagatcactcat
gccatccagtatgtagtcgagtttgcaaagaggataacagggttcatggagctctgtcaa
aatgatcaaattctacttctaaagtcaggttgcttggaagtggttttagtgagaatgtgt
cgtgccttcaacccattaaataatactgttctgtttgaaggaaaatatggaggaatgcaa
atgttcaaatccttaggttctgatgacctggtaaatgaagcttttgactttgcaaaaaat
ttgtgttccttgcagttgactgaggaagagattgctttgttctcatctgctgttctgata
tctccagaccgagcttggctgattgaaccaaggaaggtccagaagcttcaggaaaaaatt
tattttgcacttcaacatgtgattcagaagaatcatctggatgatgagatattagcaaag
ttaatagccaagataccaaccataacggcagtatgtaacttgcatggggagaagctgcag
gtatttaagcaatcacatccagacatagtgaatacactctttcctccgttatacaaggag
ctctttaatcctgactgtgccaccgtctgcaaatga
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