Suncus etruscus (white-toothed pygmy shrew): 126004406
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Entry
126004406 CDS
T09902
Name
(RefSeq) tripartite motif-containing protein 75-like
KO
K12037
tripartite motif-containing protein 75
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126004406
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
126004406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
PRY
zf-C3HC4_3
zf-RING_2
zf-RING_6
RING_XB3-XBAT31
zf-RING_5
Sina_RING
zf-rbx1
Trm112p
Hamartin
LAIKA
zf-Nse
Exonuc_VII_L
HIP1_clath_bdg
zf-ANAPC11
Baculo_IE-1
KIF9
Bacillus_HBL
Gp58
Motif
Other DBs
NCBI-GeneID:
126004406
NCBI-ProteinID:
XP_049626801
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All DBs
Position
3:97416174..97417598
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AA seq
474 aa
AA seq
DB search
MELSSGLAKLQAEVMCPVCLDYLKDPVTLDCGHNFCGACIENSWKEVEGTFPCPLCRQPR
LTRSVSANPQLARLVELAQLLQGSRPLAGEEAQAEARSCAEHQQELSLFCEDHQELLCPR
CAQSAAHQGHRVATVQEAARRHRQRLGGYIGPLKKRLAQVQKMTVAQDRTLRQLREDVDR
QKRRLASEFEQLAEFVERQQDAALGRLAEEDKRLQRQLSANIAAYSDHIARLKGLMKEVA
ERSVLSEEMLLAGLGGVVRRCEDLQPPAVAPLSCRRPDYSLPPLCSALSNLIRRFLEPVS
LDPRTAHPSLRVSEDGKSVSWVPKRLRSQTSAKFGGSSAELVVLGREGFSCGRHYWEVQV
GDKPEWAVGVCTDAPCSQAQGFPPGRKGLWVLQLQDGVYLGAGPAGAPLAVKDRPKVIGI
FLDYELGQLCFYNASDRSYLHSFSETFAEVLKPYFRVGPDCTPLTLSTGSGDLD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtcctcaggcctggccaaactgcaggcagaggtcatgtgccccgtgtgcctg
gactacctcaaggacccggtgaccctggactgcggacacaacttctgtggcgcctgcatc
gagaattcctggaaggaggtggagggcacgttcccttgccccctgtgcaggcagccccgc
ctgacaaggagcgtcagtgccaacccgcagctggcgaggctggtggagctggcccagctc
ctgcagggctccaggccccttgcaggcgaggaggcacaggcagaggcgcgcagctgtgcg
gagcaccagcaggagctgagcctcttctgcgaggaccaccaggagctgctgtgcccgcgc
tgcgctcagagcgcggcccaccagggccaccgcgtggcgacggtgcaggaggccgcgcgc
cggcaccgccagaggctcggcggctacatcgggcccctcaagaagcgcctggcccaggtg
cagaagatgacggtggcgcaggacaggaccctgcggcagctgcgggaggacgtggaccgg
cagaagcggcggctggcgtcggagttcgagcagctcgcggagttcgtggagcgccagcag
gacgccgcgctgggcaggctggccgaggaagacaagcgcctgcagaggcagctcagcgcc
aacatcgccgcctactcggaccacatcgcccggctcaagggcctcatgaaggaggtggcg
gagcgcagcgtcctgtccgaggagatgctgctcgcgggcctcgggggcgtcgtgcggcgc
tgcgaggacctgcagcccccggccgtggcgcccctgagctgcaggcgccccgactacagc
ctcccccctctgtgctctgcgctgagcaacctcatccgcaggttcctcgagcccgtgagc
ctggacccccgaacggctcaccccagcctgcgcgtgtctgaggacggcaagtccgtgtcc
tgggtgcccaaaaggctcagatcgcagacgagcgccaagttcggaggcagcagcgccgag
ctggtggtcctgggccgcgaaggcttctcctgtggccgccactactgggaggtgcaggtg
ggcgacaagcccgagtgggccgtgggcgtgtgcacagacgccccttgcagccaggcccag
ggcttcccgccaggcaggaagggactctgggtcctgcagctgcaggatggcgtctacctg
ggggccggccctgcgggggcgcccctggctgtcaaggacaggcccaaggtcatcggcatt
ttcctggactatgagctgggccagctttgcttctacaatgcgagcgacaggtcctacctc
cactctttctcggagacctttgctgaggtgctgaagccctacttccgtgtggggcccgac
tgcacccctctgaccctgagcactgggagtggggacctggactga
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