Suncus etruscus (white-toothed pygmy shrew): 126004409
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Entry
126004409 CDS
T09902
Name
(RefSeq) tripartite motif-containing protein 75-like
KO
K12037
tripartite motif-containing protein 75
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126004409
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
126004409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
PRY
zf-RING_6
RING_XB3-XBAT31
zf-RING_5
Sina_RING
zf-rbx1
Trm112p
Hamartin
LAIKA
zf-Nse
Exonuc_VII_L
Baculo_IE-1
KIF9
HIP1_clath_bdg
Gp58
Bacillus_HBL
zf-ANAPC11
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
126004409
NCBI-ProteinID:
XP_049626804
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All DBs
Position
3:complement(97479047..97480471)
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AA seq
450 aa
AA seq
DB search
MELSAGLAKLQAEVMCPVCLDYLKDPVTLDCGHNFCGACIENSWKEVEGTFPCPLCRQPR
LRRSVSANPQLARLVELAQLLQGSRPLAGEEAQAEARSCAEHQQELSLFCEDHQELLCPR
CAQSAAHQGHRVATVQEAARRHRQRLGGYIGPLKKRLAQVQKMTVAQDRTLRQLREDVDR
QKRRLASEFEQLAELVERQQDAALGRLAEEDKRLQRQLSANIAAYSDHIARLKGLMKEVA
ERSVLSEEMLLAGLGGVVRRCEDLQPPAVAPLSCRRPNYSLPPLCSALSNLIRRFREPVS
LDPQRAHPSLLVSEDGKSVSWVPKRLRSQTSAKSGGSSAELVVLGREGFSCGRHYWEVQV
GDKPEWAVGLQDGVYLGAGSAGAPLAVKDRPKVIGIFLDYELGQLCFYNASDRSYLHSFL
ETFAEVLKPYFRVGLDCTPLTLSTGSGDLD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtccgcaggcctggccaaactgcaggcagaggtcatgtgccccgtgtgcctg
gactacctcaaggacccggtgaccctggactgcggacacaacttctgtggcgcctgcatc
gagaattcctggaaggaggtggagggcacgttcccctgcccactgtgcaggcagccccgc
ctgagaaggagcgtcagtgccaacccgcagctggcgaggctggtggagctggcccagctc
ctgcagggctccaggccccttgcaggcgaggaggcgcaggcagaggcgcgcagctgtgcg
gagcaccagcaggagctgagcctcttctgcgaggaccaccaggagctgctgtgcccgcgc
tgcgctcagagcgcggcccaccagggccaccgcgtggcgacggtgcaggaggccgcgcgc
cggcaccgccagaggctcggcggctacatcgggcccctcaagaagcgcctggcccaggtg
cagaagatgacggtggcgcaggacaggaccctgcggcagctgcgggaggacgtggaccgg
cagaagcggcggctggcgtcggagttcgagcagctcgcggagttggtggagcgccagcag
gacgccgcgctgggcaggctggccgaggaagacaagcgcctgcagaggcagctcagcgcc
aacatcgccgcctactcggaccacatcgcccggctcaagggcctcatgaaggaggtggcg
gagcgcagcgtcctgtccgaggagatgctgctcgcgggcctcgggggcgtcgtgcggcgc
tgcgaggacctgcagcccccggccgtggcgcccctgagctgcaggcgccccaactacagc
ctcccccctctgtgctctgcgctcagcaacctcatccgcaggttccgcgagcccgtgagc
ctggacccccaaagggctcaccctagtctgctcgtgtccgaggacggaaagtccgtgtcc
tgggtgcccaaaaggctcagatcgcagacgagcgccaagtccggaggcagcagcgccgag
ctggtggtcctgggccgcgaaggcttctcctgtggccgccactactgggaggtgcaggtg
ggcgacaagcccgagtgggccgtgggcctgcaggatggcgtctacctgggggccggctct
gcgggggcgcccctggctgtcaaggacaggcccaaggtcatcggcatttttctggactat
gagctgggccagctttgcttctacaatgcgagcgacaggtcctacctccactctttcttg
gagacctttgctgaggtgctgaagccctacttccgtgtgggactcgactgcacccctctg
accctgagcactgggagtggggacctggactga
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