Suncus etruscus (white-toothed pygmy shrew): 126004421
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Entry
126004421 CDS
T09902
Symbol
RAD23B
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03420
Nucleotide excision repair
setr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126004421 (RAD23B)
09124 Replication and repair
03420 Nucleotide excision repair
126004421 (RAD23B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
setr03051
]
126004421 (RAD23B)
03400 DNA repair and recombination proteins [BR:
setr03400
]
126004421 (RAD23B)
Proteasome [BR:
setr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
126004421 (RAD23B)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
126004421 (RAD23B)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
Dsc3_N
Ubiquitin_2
UBA_2
DUF1421
OTU1_UBXL
UBA_9
Motif
Other DBs
NCBI-GeneID:
126004421
NCBI-ProteinID:
XP_049626816
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Position
1:79593841..79639184
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AA seq
423 aa
AA seq
DB search
MQVTLKTLQQQTFKIDIDPDQTVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDETALK
EYKIDEKNFVVVMVTKPKAVTTPSPSSAPATTQQSSPTAATTTTITTTTTTTVSPPAAPA
VAQPSTPTPALAPTPTPAAITPASTTASSEPAPASATKQEKPAEKPAETPVVASSPTATD
STSGDSSRSNLFEDATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYL
LMGIPGDRESQAVVEPPPAASSVAPQSSVAAAAATTTAATTTTSSGGHPLEFLRNQPQFQ
QMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGSQGGGSGGGS
GGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNF
DED
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcaccctcaagaccctgcagcagcagaccttcaagatcgacatcgaccccgac
cagacggtgaaagcactgaaagagaagattgaatctgaaaaagggaaagatgcctttcct
gttgcagggcaaaaattaatttatgcaggtaaaatccttaatgatgagactgcgctgaaa
gaatataaaattgatgagaaaaattttgtggtggttatggtgacaaaacctaaagcagtg
acaacaccatcaccatcatcagcaccagctacaactcagcagtcaagtcctacagccgcc
accaccactactatcaccaccaccaccaccaccacagttagtccccctgcagctccagct
gtggctcaaccttcaactcccaccccagctttagctcccactcccacacctgcagccatc
actccagcttcaaccacagcatcttctgaacctgcacctgctagtgcaactaaacaagag
aaacctgcagaaaaaccagcagaaaccccagtagtggcttccagcccaacagcaactgac
agtacatcaggagattcttctcggtcaaacctctttgaagatgcaacaagtgcacttgtg
acaggtcagtcttacgagaatatggtaactgagatcatgtcaatgggttatgaaagagag
caagtaattgcagccctgagagccagtttcaacaaccctgacagagcagtggagtatctt
ttaatgggaatccctggagatagagaaagtcaggctgtggttgagccccctccagcagct
agttctgtggctcctcagtcttctgtggctgcagctgcagcaactacaacagcagcgact
acaacaacaagttctggaggtcaccctcttgaatttttacggaaccagcctcagtttcaa
cagatgagacaaattattcaacagaatccttccctgcttccagctttgctacaacaaata
ggtcgagaaaatcctcagttactacagcaaattagccaacaccaggagcattttattcag
atgttaaatgagccagttcaagaagctggtagtcaaggaggaggaagtggaggaggcagt
ggaggaattgcagaagctggaagcggtcatatgaattacattcaagtaacacctcaggaa
aaagaagctatagaaaggttaaaggcattaggatttccggaaggacttgtaatacaagca
tattttgcttgtgagaagaatgagaacttggctgccaattttcttctacaacaaaacttc
gatgaagattga
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