Suncus etruscus (white-toothed pygmy shrew): 126004466
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Entry
126004466 CDS
T09902
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04151
PI3K-Akt signaling pathway
setr04510
Focal adhesion
setr04512
ECM-receptor interaction
setr04820
Cytoskeleton in muscle cells
setr05145
Toxoplasmosis
setr05146
Amoebiasis
setr05165
Human papillomavirus infection
setr05200
Pathways in cancer
setr05222
Small cell lung cancer
setr05410
Hypertrophic cardiomyopathy
setr05412
Arrhythmogenic right ventricular cardiomyopathy
setr05414
Dilated cardiomyopathy
setr05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126004466 (LAMA1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126004466 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126004466 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
126004466 (LAMA1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126004466 (LAMA1)
09162 Cancer: specific types
05222 Small cell lung cancer
126004466 (LAMA1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
126004466 (LAMA1)
09174 Infectious disease: parasitic
05146 Amoebiasis
126004466 (LAMA1)
05145 Toxoplasmosis
126004466 (LAMA1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
126004466 (LAMA1)
05412 Arrhythmogenic right ventricular cardiomyopathy
126004466 (LAMA1)
05414 Dilated cardiomyopathy
126004466 (LAMA1)
05416 Viral myocarditis
126004466 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
126004466
NCBI-ProteinID:
XP_049626848
EnsemblRapid:
ENSSRTG00000019224
LinkDB
All DBs
Position
3:complement(132747080..132895945)
Genome browser
AA seq
3101 aa
AA seq
DB search
MASEMPSLLQRRAVLIGDHYDNWSDKILWQMRKLGASNIMEVKRTQGLFPAIFNLASNAH
ISTNATCGENGPEMFCKLVEHVPGRPLRNAQCRICDGSSTNPKERHPISNAIDGTNNWWQ
SPSIQNGREYHWVTITLDLRQVFRVAYVIIKAANAPRPGNWILERSLDGINFSPWQYYAV
SDTECLTRYNITPRRGPPTYRADDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDLSPK
LLEFTSARYIRLRLQRIRTLNADLMTLSHHDPKDLDPIVTRRYYYSIKDISIGGMCICYG
HASSCPWDETTKKLQCLCEHNTCGENCNHCCPGFHQQPWRPGTLSSGNTCEECNCHNKTK
DCYYDENVATQKRSLNTAGEFRGGGVCINCLQNTMGINCEKCIDGYYRPHKVSPYEDNPC
LPCDCDSLGSLSSVCIKDDLHSNLHEGKWPGQCPCKEGYAGEKCDRCQFGYKGYPVCVPC
DCNLAGSVNEDPCSEPCLCKENVEGKKCDRCKQGFYNLKERNPQGCSECFCFGVSNVCDS
LSWPISQVTNMSGWLITDLVSPNKISSQQDALGGQHQISINHTEVMKHLASKYYWSAPGA
YLGNKLTAFGGFLKYTVSYTIPVEMMDSDLMFHDDVIIKGNGITLSTQTEGLSLQPYEEY
FNVVKLIPENFRDFNTKMEIDRDQLMTVLANVTHLLIRANYNSAKTALYRLSSVSLDTAS
PNTIDLALATEMEHCECPQGYEGISCESCLPGYYRVDGILFGGICQPCECLGHAAECDIH
GVCIACEHNTTGDHCEQCAPGFYGNPSQGTPGDCQPCACPLATTSNNFSPTCHLDIDGEE
MICDQCALGYSGTWCERCADGYYGNPTVPGESCILCNCSGNVDPLEAGHCDSVTGECLRC
LGNTDGAHCERCADGFYGDAVTAKNCRACKCHGKGSLSNMCHHETGLCACKPYVTGQQCD
QCLYGYYGLDSGLGCLPCNCSTSGSTSDDCTEEGQCHCVPGVAGNICDRCARGFFAFQDG
GCTPCDCAHTQNTCDPQTGECICPLHTRGVACEECEDGYWGHDLELGCQACNCSSVGSAS
HQCDVFTGLCQCQPTFGGPSCNQCSVGYRDFPDCVACDCDPRGTLPDTCDQEQGLCSCAE
KTGTCSCKENVIGLQCSECRAGTYALSSDEALGCTPCFCFGFSQLCSELEDYVRTPVTLD
SAQPLLRVVSQSNLRGTIEGVYLQAPDILLDAEIVRQHVQAEPFYWRLPGQFQGDQLLAY
GGKLKYSIAFYSSHGVGTFNLEPQVLIKGGRTRKQVIYVDLPAPENGVRQEHEIGMKEKF
WKYFNSVSEEAVTRSDFMSILSDIEYILIKASYGQGLQQSRISNISMEVGQKAEALHEAK
ESAFMIEKCICPPGTAGLSCQDCAPGYYRGKHSYGADRGPRPLLAPCVPCSCNNHSDICD
PETGVCLNCSDNTAGDHCEVCAPGYFGKVTGSPGDCSLCTCPHRPPASFSPTCVLEGAHN
FHCDACLPGYEGQYCERCSPGYYGNPQTLGGTCQQCNCSPIGSLHRDCDRDSGQCICRPG
ATGLRCEECEPRHILMESDCVSCDDECVGVLLNDLDNIGNAITSVNLTSTIPVSYGILSN
LENKTTYLQKSLLKENAHTELTTIQLKTITEETNNLQGELTKLSTESQYVTKTTEKVFNK
SHDLQIFIEKLQIHIQELIEKAATLNQTLEGDFQLPTSTLQKMHKNITALVEIIQKRHFM
ELLQKANLELKAAEDLLSQIQKHYQKPQKELDILREAASILSKHNHELQAATELVRVAEV
KTQESGHLLLIVSANLREFSDKKLFVQEEQNLTSTLITRGKGLIDSVSELATAMQNTLTQ
LESHRDELLLWTAKLRHHVDDLVMEMSKRRVLNLVYGAEDHAAELQKLAGTLESDLGNVK
YVSLNATSATNVHSNIRRFIEESEKLAEDALSTVTNTKLFSESLAAEGKVALQSSSTFLR
EGHSLSRKHQGITLKLRELKNMANRFQEAVDKVTRQTNESLLMLREIPEGARIRRTKIKE
LAISANQSAKNTLKGIVGLSQKLMNTSTGLSGVNATLREARQFLQDSSVTTLLAGRKVKD
AETQANLLFDRLKPLKILEENLSRNLSEIKLLISQARKQAASIKVAVSADKDCIRAYQPH
ISSTNYNSITLNVKTSEPDNLLFYLGSSTSSDFLAVEMRKGKVAFLWDMGSGSTRVEFPD
VQIDDNKWYSIYVTRFGNIGSLSVKETSTSQKPPAKTSKSPGPANVLDINNSTLLFIGGL
GGQIKKSSAVKVTHFKGCMGEALLNGHPIGLWNYVEREGKCHGCFGSPQNEDSSFYFDGS
GYSVVEKTLRTTVTQIIMLFKTFSPNGLLLYLASNDTKDFLSVELVHGRVKVTVDLGSGP
LALITNRRYNNGSWFKIAFQRNRKQGHLAVVDPYDTSYKETKQGETPGSSSDLNRLNKDP
IYVGGLPRTRILRRGVVSKNYVGCIRNLEISRSTFDLLRNSYGVRKGCILEPIRSISFLK
GGYVELPPKSLSPESQLLATFVTQNSSGIILAALDKQGKKKQQDHMPFFAIMMIEGHIEV
HVNAGDGTSLRKALLHSPTGTYSDSQEHSISLRRNGRTITVQLDETHPVEMKMSSLVESR
TINVSSLYIGGVPEGEGTPMLKMRQSFHGCIKNLIFNMELLDFTSAVVYEQVELDTCLVS
ARPELALPGADSQLLLEPQPLPNLEQCAAEAVPDYVPGAHQFGLAQDSHLILPFNHSAVR
KRLSVQLHIRTFATSGLIYYMAHQSQVDYATLQLHDGRLHFMFDLGKSRTKVSHPALISD
GKWHTVKTEYYKRKGVMTVDGQESATVTAVGDGTTLDVEGKLYLGGLPSEYRAKNIGNVT
HSIPACIGEVTLNSKQLDKDSPVSVFAVRRCYVAAQEGTFFEGSGYAALVKEGYKVRSDL
NITLEFRTSSHSGVLLGISSAKVDAIGLEIVNGKLLFHVNNGAGRITAIYEPPTTYALCN
GKWHTLHAHKSKHRLTLIVDGNAVHAESPHTQSTSADTNNPIYVGGYPADVKQNCLSTRT
AFHGCLRKLTLMKGPQVQSYDFNRAFELQGVFPHSCPGTES
NT seq
9306 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgagatgccttctcttctccagaggagagcagttctcattggagaccactat
gataactggtctgacaagattctatggcagatgagaaaactaggagcctctaatataatg
gaggtcaaaaggacacagggcctgtttcctgcgatttttaatcttgccagcaatgctcac
atcagcaccaatgcaacctgtggtgagaacggacccgagatgttctgcaaactcgtggag
cacgtgccaggccgtccattgcggaatgcacagtgccggatctgtgatggcagtagcaca
aatcccaaagaacgccatccgatatcaaatgccattgatggcaccaataactggtggcaa
agtcctagtattcaaaatggaagagaatatcactgggtcacaatcactctggatttgaga
caggtctttcgagtagcctatgtcattatcaaagctgctaatgccccccgacctggcaac
tggattttagagcgttctcttgatggcattaacttcagtccttggcaatattatgcagtc
agtgacactgagtgtttgacccgctacaatataactccacgacgaggaccacctacctac
agagcagatgatgaagtgatttgcacctcttattattccagactggttccacttgaacat
ggagagattcatacatctctaatcaatggtagaccaagtgctgatgatctttcacctaag
ttgttggaatttacttcagcacgatacatccgccttcgcttgcaacgcattcgaaccctc
aatgcagatctcatgactctcagccaccatgatcctaaagacctggacccgattgtcaca
agacgatattactattcaatcaaagacatatctattggaggaatgtgtatttgctatggc
catgcgagtagttgcccatgggatgaaactacaaagaaactacagtgtctatgcgaacat
aacacatgtggcgagaattgcaatcattgttgtcctggattccatcagcagccctggaga
cctgggaccctttcatctggaaatacatgtgaagaatgtaactgtcacaataaaacaaaa
gattgctactatgatgaaaatgttgctactcaaaagagaagtttgaatactgctggagag
ttcagaggagggggagtttgcataaactgcctgcaaaacaccatgggaatcaactgtgaa
aagtgcattgatggatattacaggccacacaaagtatctccttatgaggacaatccttgc
cttccctgtgactgtgattccctggggtccctcagttctgtctgtattaaggatgatcta
cattctaacttacacgaagggaaatggccaggacagtgtccctgcaaggaaggctatgca
ggagaaaaatgtgatcgctgccagtttggctataaaggttatccagtctgtgtcccctgt
gactgcaatctggctggcagtgtgaatgaggatccgtgctcagagccatgcctctgtaag
gagaatgtggagggaaagaaatgtgatcgctgcaagcagggattctataatctgaaggaa
agaaacccacagggatgctctgaatgcttctgctttggcgtctcgaatgtttgcgacagc
ctttcttggccaatcagtcaggtgacaaatatgtccgggtggctgatcactgacttggtg
agtccaaataagatctcatctcagcaggatgccctgggtgggcaacatcagatcagcatc
aaccacacagaagttatgaaacatctggcatccaaatattactggtcagccccaggggcc
tacctgggaaataagctgacagcctttggcggcttcctgaagtacacagtatcgtatact
attccagtggagatgatggacagtgacctcatgtttcatgacgatgtcataatcaaggga
aatggaatcactttaagcacccagactgaaggcctatctttgcaaccttatgaggagtat
ttcaatgtggtcaaacttattcctgagaacttcagagattttaataccaaaatggagata
gatcgtgaccagctaatgacagtccttgccaatgtgacacatctcttgatcagagccaac
tataattctgcaaaaacagctctgtataggttgagttcggtctccctggacacagccagc
cctaacactatagacctggccctggccactgaaatggagcactgtgaatgtccccaaggc
tatgagggcatctcttgtgagtcctgtcttcctggctattaccgagtggatggaatactc
tttggaggcatttgtcaaccctgtgaatgtcttggacatgcagcagagtgcgatattcat
ggtgtttgcattgcctgtgagcacaataccacaggagatcactgtgagcagtgtgcaccc
ggcttctatggaaatccttcccaggggactccgggagactgccagccctgtgcctgcccc
cttgccactacctccaataatttcagccccacctgccatcttgatattgatggagaggaa
atgatctgtgaccagtgcgccctaggatactcaggaacttggtgtgagagatgtgcagat
ggttactatggaaatccaactgtgcccggagaatcctgcattctgtgtaactgcagtggc
aatgtggaccccttagaggctgggcactgtgactcagtcactggagaatgtctacggtgc
ctggggaacacagacggtgcccactgtgaaagatgtgctgatggattctacggggatgct
gtgacagccaaaaactgccgtgcctgtaaatgccatggaaaaggctccctttccaacatg
tgccatcatgaaactggactctgtgcctgcaagccatacgtgacaggacagcagtgtgac
cagtgcttgtacggatattacgggctggactcagggcttggttgcctgccctgtaactgc
agcacatcagggtccacgtcagatgactgcacggaagaaggccagtgtcactgcgtacca
ggtgtggctgggaatatatgtgacagatgtgcacgtggcttcttcgcatttcaggatggt
ggctgtacaccctgtgactgtgctcacactcagaacacctgtgatccccaaacaggggag
tgtatctgccccttgcacaccaggggtgtggcctgtgaggaatgtgaggatggctactgg
ggtcacgacctggagcttggatgccaggcttgcaattgcagtagtgtgggctcagccagt
catcagtgtgatgtgttcactggactttgccaatgtcagcctacctttgggggaccaagc
tgcaatcagtgctctgtgggttacagggacttcccagattgtgtggcctgtgactgtgac
ccaagagggacattgccagatacctgtgatcaggaacagggtctctgcagctgtgcagaa
aaaactggaacctgctcatgcaaggaaaacgtcattggacttcaatgcagtgagtgccga
gctggcacctatgccctcagctctgacgaggcccttgggtgcaccccatgcttctgcttt
gggttctcacagttgtgctcagagttggaggattacgtgaggacaccagttacactggac
tcagctcaaccacttttgcgtgtggtttctcagagtaatttgaggggcacgattgaaggg
gtgtatctgcaggctccagacattctcctggatgctgagatagtcaggcagcacgtccag
gcagagccgttttactggcggcttccaggccaattccagggagatcagctcctagcctat
ggcggaaaactgaaatacagcatagctttctactcttcccatggagttggcaccttcaat
cttgaacctcaagtgctcatcaaaggaggccggactagaaagcaagtcatttatgtggat
ttacctgcaccagagaatggagtgagacaagagcatgaaataggaatgaaagagaaattt
tggaaatactttaattctgtgtctgaggaagcagtcacacgctcagactttatgtctatt
cttagtgacattgaatatatactcattaaagcatcctatggacaaggattacagcaaagc
agaatctcaaatatttcaatggaggttggccagaaagcagaagctctgcatgaggcgaag
gagtcggcattcatgatagagaaatgtatctgtccacctggcacagctggattatcttgt
caggactgtgcccctggttactacagaggaaagcattcctatggtgctgacagaggaccc
cgccctctgcttgccccttgtgtgccttgcagttgcaataaccacagtgacatatgtgac
cctgagactggagtatgtctgaactgcagtgataatactgctggagaccattgtgaagtg
tgtgctcccgggtactttgggaaggtgactggctctcctggggactgctctctctgcact
tgtcctcatcgacctcctgccagttttagtcccacttgtgtcttggaaggtgctcataat
ttccactgtgatgcttgtttaccaggctatgaaggacaatattgtgaaaggtgctctcca
ggttattatgggaaccctcaaacactaggtggcacctgtcagcagtgtaactgcagcccc
ataggctctcttcacagagactgtgaccgtgattctgggcagtgcatctgcagaccgggg
gctactgggctaagatgcgaggaatgtgaaccaaggcatattctaatggaaagcgattgt
gtgtcatgtgatgatgaatgtgtaggcgtgctgctgaatgacctggataatattggtaat
gctatcacttctgtgaacctcaccagcacaatcccagtctcatatggaattttgtcaaat
ctggaaaataaaacaacatatctccagaaatccttattaaaagaaaatgcacacacagaa
ctgacaacaattcaacttaaaaccattacagaagagacaaataatcttcaaggagagctt
actaaactatcaacagaaagccaatatgtgaccaagacaactgagaaagtcttcaacaag
agtcatgatctccagatatttattgagaagctccagatacacatacaagaactcattgaa
aaggcagcaactctaaatcaaaccttagagggagatttccaactacccacttctactctt
caaaaaatgcacaagaatattacagctttggtggaaattatccagaagaggcatttcatg
gagttgctccaaaaggccaaccttgaacttaaggctgctgaagatttattgtcacagatt
cagaaacattaccagaagccacagaaagagttggacatattaagagaagctgcaagcatc
ctttcaaaacacaaccatgaactgcaagcagccacggagcttgtgagagtagcagaggtg
aagacccaggaaagtggtcacctgctgctcattgtcagtgccaacctacgagaatttagt
gataaaaagttgtttgtccaagaagaacaaaacttgacctcaactctaataaccagaggg
aaaggattaatagattctgtctctgaacttgcaactgctatgcaaaatactctgacacaa
ttggagagtcaccgagatgagctacttttgtggactgctaagctgaggcatcatgtagat
gacctagtcatggagatgtccaaaagaagagtactgaaccttgtgtatggagctgaggac
catgcagctgaactccagaaactagctggtactttggaaagtgaccttggaaacgtcaag
tatgtgtccttgaatgcaaccagtgcaaccaatgtccattccaatattcggagattcatc
gaagaatcagagaaattggccgaagatgctcttagtactgtgactaacacaaaactgttc
tcagaatcgcttgctgctgaagggaaagtggctctccagagcagttccacattcctgaga
gaaggccacagcctgagcaggaagcatcaaggaatcacattgaaactgagagaattgaaa
aatatggcaaacagatttcaagaagctgttgataaagttactaggcagaccaatgaatca
ctcttgatgctcagagaaattcctgaaggtgccagaatcaggagaactaaaatcaaagag
ctggccatatctgcaaaccagagcgctaagaacactctcaagggcattgtgggattaagt
cagaagctgatgaatacatcaacaggcctgtctggagtcaatgccaccttgcgagaagca
aggcagtttctgcaggattcctccgtgaccactctattagctggaagaaaagtcaaagat
gctgaaacacaagccaacctgttatttgaccgtttgaagcctttgaagatactagaagag
aacctgagcagaaatctctcagaaatcaaattgttgatcagccaagctaggaaacaagcc
gcttctattaaagttgctgtgtctgcagacaaagattgcatccgggcctaccagcctcat
atatcttctactaactataattccataacactgaatgttaagacaagtgaacctgataac
cttctattttacctgggaagcagcaccagttctgattttctggcagtggagatgcgaaaa
gggaaggtggccttcctctgggatatgggctctggatcaacacgggtagaatttcctgac
gtccagatagatgacaacaaatggtacagcatttatgtaaccagatttggaaatattggt
tcattgagtgtaaaagaaacaagcacatctcaaaagccaccagcaaaaacaagcaaatct
cctggaccagctaatgttctggatataaataattcaacattgctgttcattggaggactt
ggaggacagatcaagaagtcttctgctgtgaaggttactcattttaaaggctgcatgggt
gaagccctcttgaatggacatccaattggtctctggaactatgtggaaagagaagggaag
tgccacggctgttttggaagtccgcagaatgaagattcttccttctattttgatggaagt
gggtattctgtcgtggagaagacacttcggactactgtaactcagataatcatgcttttt
aagaccttttcacctaatgggcttctcctctaccttgcttcaaatgatactaaagacttt
ttgtctgttgaactggttcacggcagagttaaagttacagttgacttaggctcaggacct
cttgctcttattacaaacagacgctacaataatggatcctggttcaaaatagctttccag
agaaaccgaaagcaaggtcacctagcagttgttgatccatatgacaccagctacaaagaa
accaagcaaggtgaaactcctggatcatcttctgacctcaatcgtctcaataaggatccg
atttatgttggtggattacctagaacaagaatattaaggaggggtgttgtcagcaagaat
tatgtgggctgtatcagaaacctggaaatatccagatcaacctttgatttactcagaaat
tcctatggagtgagaaaaggctgtatactggagcctattcgaagtattagcttcttgaaa
ggcggctatgttgaactaccacctaagtctttgtcaccagaatctcaattgttggcaaca
tttgtcactcagaacagcagtggcatcattctggctgccctggacaagcaagggaaaaaa
aagcagcaggatcatatgcctttctttgccatcatgatgattgaaggccacattgaagtg
cacgttaatgctggggatggaacaagcctgagaaaagctctcctgcattctcccacaggc
acttacagcgatagtcaagagcactctatttctttgaggagaaatggaagaactatcact
gtccaattggatgaaacacatcctgtagagatgaagatgagttcattagtagaaagcagg
accataaatgtatccagcctgtacatagggggggttccagagggtgaggggacacccatg
ctcaagatgagacaatcattccatggttgtattaaaaacctgatcttcaacatggagttg
ttggatttcaccagtgcagttgtctatgaacaagtggaactggatacttgcttggtttca
gcgaggcctgaattggctcttcctggagcagacagccagctcctgctggagcctcagcct
ttaccaaacctggaacaatgtgcagcagaagctgtcccagactacgttcctggtgctcac
cagtttggccttgcacaagatagccatttaatattgccttttaatcactcagctgtccga
aagaggctgtcagttcagcttcacatccgaacttttgccaccagtggtctgatttactac
atggctcaccagagccaagttgactatgctacactgcagctacatgatgggcgcctccac
ttcatgtttgatctggggaagagcagaacaaaggtctcccaccctgcactgatcagtgat
ggcaagtggcacacggtcaaaacagagtactataagagaaaaggcgtcatgacagttgat
ggccaagaatctgccacagtgactgcagtgggagatggtaccacattggatgtggagggg
aagttgtatcttggaggcctcccctctgagtatagggccaagaacattggaaatgtcacc
catagcatccctgcttgtattggagaagtgacactgaatagcaaacaacttgacaaggac
agcccagtgtctgtgtttgcggtgagacggtgctatgtagcagcccaggaaggaactttc
tttgagggaagtggatatgctgctcttgtgaaagagggctacaaagtccgatcagatcta
aacatcacactggagttccgcacctcctcccacagtggcgtcctcctggggatcagcagt
gccaaagtggatgccattggactagaaattgttaatggcaagctcttgtttcatgttaac
aatggtgcggggaggataacagccatctatgagcccccaactacctatgctctctgcaat
ggaaaatggcacacgcttcatgctcacaaaagtaaacaccgcttgactctgatcgttgat
ggaaatgcagttcatgctgagagtccacatacccagtctacctctgcagacaccaacaat
cctatctatgttggtggttaccctgctgatgtaaagcaaaactgcctaagcacgagaaca
gccttccatggatgcttgaggaagcttacactgatgaagggcccacaggtgcagtcgtat
gacttcaacagagcctttgagctccaaggagtttttcctcattcttgtcctgggacagag
tcctga
DBGET
integrated database retrieval system
