Suncus etruscus (white-toothed pygmy shrew): 126005812
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Entry
126005812 CDS
T09902
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126005812 (HMBOX1)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
126005812 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
DUF494
AbiJ_NTD3
CUT
HTH_31
HTH_24
HTH_37
HTH_26
NOC3p
HTH_23
Motif
Other DBs
NCBI-GeneID:
126005812
NCBI-ProteinID:
XP_049627077
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All DBs
Position
4:complement(103327900..103493098)
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AA seq
446 aa
AA seq
DB search
MLSSFPVVLLDTMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLERLDQEHSDK
FGRRSSYGGSASSYGNSTSNVPASSSTATASTQTQPSGMSPSPSNSYDTSPQPCTATQNG
RDTSERLPTANGKLSPSRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIK
AFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKSNPGATLSM
RPAPVPIEDPEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKRE
EIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSP
GGHSNSDDVDGNDYSEQDAWQVRPGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEM
AAVNHTILALARQGANEIKTEALDDD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttccttccccgtggttttgctggacaccatgtctcactacacagatgagccc
cggttcactatcgagcagatagacctgttgcagcgcttgcggcgcacaggcatgaccaag
catgagatcctgcatgccctggagaccctggagcgcctggaccaggagcacagtgacaag
ttcggccggagatccagctatggtggcagcgcctcgtcttatgggaacagcaccagcaac
gtgcccgcgtcatcctcgacggccacggcctccacccagacacagccctcaggcatgtcc
ccttcacccagcaacagctatgacacgtcgccacagccctgcacggccacccagaatggc
cgggacaccagtgagcggctgcccaccgccaacgggaagctgtcgccaagtcgctatcac
gccaacagtatgggccaacgctcctacagctttgaggcctccgaggaggacctggacgtg
gacgacaaggtggaggagctgatgaggagggacagcagtgtgataaaagaggaaatcaaa
gcctttcttgccaatcggaggatttcccaagcagttgttgcacaggtcacagggatcagc
cagagccgcatctcacactggctgctgcagcaggggtccgacctgagcgagcagaagaaa
agagccttttaccgttggtaccagctggagaagtcgaacccaggggccacactaagcatg
cgaccggcccccgtccccatcgaagaccccgagtggagacaaacaccacccccagtctct
gccacgtccggcaccttccggctccgccgaggcagtcggtttacctggaggaaggaatgt
ctggccgtcatggagagttacttcaatgagaaccagtatccagatgaagcaaagagagaa
gaaatcgccaatgcctgcaatgctgttatacagaaaccaggcaaaaaactctccgatcta
gaacgagtaacttccctgaaggtctataactggttcgccaacaggcggaaggagatcaag
aggagagcaaacattgaagcagcaatcctggagagccacggtatcgacgtgcagagcccc
ggcggccattccaacagcgacgacgtggacggcaacgactactcggagcaggatgcttgg
caagtgcgccctggggaggaggaggagggacgcagctcagagggaggcagagaagcagag
aaggacgacagtactagccatagcgaccaccaagaccccatctccttggcggtggaaatg
gcggcagtcaaccacaccatcttggccttggcccggcaaggagccaacgagatcaagaca
gaggccctggacgacgactga
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