KEGG   Suncus etruscus (white-toothed pygmy shrew): 126005879
Entry
126005879         CDS       T09902                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03082  ATP-dependent chromatin remodeling
setr03083  Polycomb repressive complex
setr04110  Cell cycle
setr04213  Longevity regulating pathway - multiple species
setr04330  Notch signaling pathway
setr04350  TGF-beta signaling pathway
setr04613  Neutrophil extracellular trap formation
setr04919  Thyroid hormone signaling pathway
setr05016  Huntington disease
setr05031  Amphetamine addiction
setr05034  Alcoholism
setr05165  Human papillomavirus infection
setr05169  Epstein-Barr virus infection
setr05200  Pathways in cancer
setr05202  Transcriptional misregulation in cancer
setr05203  Viral carcinogenesis
setr05206  MicroRNAs in cancer
setr05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    126005879 (HDAC2)
   03083 Polycomb repressive complex
    126005879 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    126005879 (HDAC2)
   04350 TGF-beta signaling pathway
    126005879 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    126005879 (HDAC2)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    126005879 (HDAC2)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    126005879 (HDAC2)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    126005879 (HDAC2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126005879 (HDAC2)
   05202 Transcriptional misregulation in cancer
    126005879 (HDAC2)
   05206 MicroRNAs in cancer
    126005879 (HDAC2)
   05203 Viral carcinogenesis
    126005879 (HDAC2)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    126005879 (HDAC2)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    126005879 (HDAC2)
   05165 Human papillomavirus infection
    126005879 (HDAC2)
  09164 Neurodegenerative disease
   05016 Huntington disease
    126005879 (HDAC2)
  09165 Substance dependence
   05031 Amphetamine addiction
    126005879 (HDAC2)
   05034 Alcoholism
    126005879 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:setr03036]
    126005879 (HDAC2)
Enzymes [BR:setr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     126005879 (HDAC2)
Chromosome and associated proteins [BR:setr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     126005879 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     126005879 (HDAC2)
    BRAF-HDAC complex
     126005879 (HDAC2)
    REST complex
     126005879 (HDAC2)
    SHIP complex
     126005879 (HDAC2)
    MiDAC complex
     126005879 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     126005879 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    126005879 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    126005879 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 126005879
NCBI-ProteinID: XP_049627151
LinkDB
Position
4:complement(84036946..84066834)
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDNSGEKTDTKGA
KSEQLNNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcagggaggcggcaagaagaaagtgtgctactactacgacggtgacatt
ggaaattattattatggacagggtcatcccatgaaaccacatagaattcgcatgactcat
aacttgctgctaaattatggcttatataggaaaatggaaatatataggccccataaagcc
actgctgaagaaatgacaaaataccacagtgatgaatacatcaaatttttacgttcaata
agaccagataacatgtctgagtatagtaagcagatgcagagatttaatgttggagaagat
tgtccagtatttgatggactctttgagttttgtcaactctcaactggtggctcagttgct
ggggctgtaaagttaaaccgacaacaaactgatatggctgttaattgggctggaggatta
catcatgctaagaagtcagaagcatcaggattctgttatgttaatgatattgtgcttgcc
atccttgaattattaaagtatcatcagagagtcttatatattgatattgatatacatcat
ggtgatggtgttgaagaagctttttatacaacagatcgtgtaatgacagtatctttccat
aaatatggggagtactttcctggtactggagatttgagggatattggtgcaggaaaaggc
aaatactatgccgtcaattttccaatgagagatggtatagatgatgagtcatatggacag
atatttaagccaatcatctcaaaggttatggagatgtatcaacctagtgctgtggtgcta
caatgtggtgcagactcactatctggtgatagacttggttgcttcaatttgactgtcaaa
ggacatgctaagtgtgttgaggttgtaaaaactttcaacttaccgttactgatgcttgga
ggaggtggatatacaatccgtaacgttgctcgatgttggacatatgagacggcagttgcc
cttgattgtgaaattcccaatgagttgccatataatgattattttgaatattttggacca
gacttcaaacttcatattagtccctcaaatatgacaaaccagaacactccagaatatatg
gaaaagataaagcagcgtttatttgaaaatttacgcatgttacctcatgcacctggtgtt
caaatgcaagcaataccagaagatgctgttcatgaagacagtggagatgaagatggagaa
gatccagataagagaatttctattcgcgcatcagacaaacggatagcttgcgatgaagaa
ttctcagactctgaggatgaaggagaagggggtcgaagaaatgtggcagatcataagaag
ggagcaaagaaagccagaattgaagaggacaagaaagaaacagaggacaaaaaagcagat
gttaaggaagaagataaatccaaggacaatagtggtgaaaaaacagataccaaaggagcc
aaatcagaacagctcaacaacccttga

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