Suncus etruscus (white-toothed pygmy shrew): 126005910
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Entry
126005910 CDS
T09902
Symbol
LAMA4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04151
PI3K-Akt signaling pathway
setr04510
Focal adhesion
setr04512
ECM-receptor interaction
setr05143
African trypanosomiasis
setr05145
Toxoplasmosis
setr05146
Amoebiasis
setr05165
Human papillomavirus infection
setr05200
Pathways in cancer
setr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126005910 (LAMA4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126005910 (LAMA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126005910 (LAMA4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126005910 (LAMA4)
09162 Cancer: specific types
05222 Small cell lung cancer
126005910 (LAMA4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
126005910 (LAMA4)
09174 Infectious disease: parasitic
05146 Amoebiasis
126005910 (LAMA4)
05145 Toxoplasmosis
126005910 (LAMA4)
05143 African trypanosomiasis
126005910 (LAMA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
EGF_LMN_ATRN
EGF_laminin
Laminin_G_3
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
126005910
NCBI-ProteinID:
XP_049627188
LinkDB
All DBs
Position
4:complement(82060006..82221836)
Genome browser
AA seq
1816 aa
AA seq
DB search
MALSSAWRSLLSLWLLWGAVGSSTAFGGRSFPLDIEGRFTAGRQEPLDPRSLTSATKKCG
AGFFQAHSGECLPCDCNGHSNECLDGSGFCVDCKQNTTGEHCEKCLDGFIGDSINGVPHI
CQPCPCPLPHLANFAVSCYRKSGVVRCICNENYAGPNCERCAPGYYGNPLLIGSTCKKCD
CSGNSDPNLIFEDCDEITGQCRNCLPHTTGFKCEHCAPGYYGDARIAKNCAVCNCGGGPC
DSVTGECLEEGFEPPTGTDCPIISCDKCIWDLTDDLRLAYLSIEESKSGVLSVSSGAAAH
RHVTEVNSTIYHLKTKLSERENQYILRKIQINNAENTMKSILSDMEELTERESQTSRKGQ
LAQKESMDTINHATQLVEQAHEMRDKIKEINNKMLYYGEKQELSSEEISEKLVLAQKMLE
EIKHRQPFLTQRELVDEEADEAHELLNQAENWQRLSNDTRSLFPVVLEQLDDYNAKFSDI
QESLDQALNRVRDAEDMNRVIAARQRDHEKQHERVREQVESVNATLRLSSDTLEIPRLTL
SELDDIIKNASGIYAEIDGAKNELQGKLANLSNLGYDLVQEAIDHARNLQLEADELSRNL
HSSDMNGLVQKALDASNVYENIANYVNEANETAEFALNITERIYDAVSGIDTQIIYHKDE
SENLLHQARELQTRADSSNEEAVADTSRRVDGAQARKSFFKNRLNDAIKQLQAAERGDTQ
HRLDQSKMTIAEANRTTQQVQEVTTPMTNNINNWSQNLQSFDSSAFNTAVNSARDAVRNL
TEVMPQLLDQLRTVEQKRPASNVSASIQRIRELIAQTRSVASKIQVSMMFDGQSAVEVHP
KTSVDDLKTFTSLSLYIKPPTVKKSEQTGISDQFILYLGSKNAKKEYMGLAIKNDNLVYI
YNLGSKDVEIPLDTKPVSSWPAHFSIVKIERVGKHGKVFLTVPSLSSTAEEKFIKKGQFT
EDDSLLDLDPEDIVFYVGGVPSEFKLPSSLNLPGFTGCIELATLNNDVISLYNFKHIYHM
DPTKSVPCARDKLAFTQSRAASYYFDGSSYAVVRDITRRGKFGQVTRFDIEVRTTADNGL
VLLMVNGSMFFSLEMRNGYLHVFYDFGFSNGPVHLEDTLKKARINDAKYHEISIIYHNDK
KMILVVDRRHVKSMDNEKMKMPFKDIYIGGAPREILQSRFLTKHLPLDINFRGCMKGFQF
QKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNGQSFISSVQKLSFFDGFEGGFNFRTLQ
PNGLLFYYASGSDVFSVSLGNGSVIMDVKGTKVQSLNKQYNDGLSHFIITSVSPARYELM
VDKNIYGNENPTKGKAEQTQAGEKKFYFGGSPISPQFANLTGCISNAYFTRLDRDVEVED
FQQYSEKVHTSLYECPIESPPLFLLHKKGKNSSKTKTSLNKKGEKSKDAPAWDPVGLKFS
EQPAPRDSRCQLSKSPRAIEHAYQYGGTANSRQEFEHLKDDFGEKSQFSIRLKTRSSHGM
IFYVSDQEENDFMTLFLAHGRLVFMFNIGHKKLKIRSQEKYNDGLWHDVIFSREKSSGRL
IIDGLRVLEENLPPTGAAWKIKGPIYLGGVAPGRAVKNVQINSVYSFSGCLSNFQLNGAS
VTFASQTFSVTPCFEGPMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSNSGTLVH
GHSVNGEYLNVHIKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDV
DSEVNHVVGPLNPKPVDHREPVFVGGVPESLLTPHLAPSKPFTGCIRHFVIDGQPVSFSK
AALVSGAVSINSCPAA
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atggctttgagctcagcctggcgctctctcctgtccctctggctgctctggggagccgtc
gggtccagtactgcgttcggaggccgcagttttcctctggacattgaaggacgcttcacc
gccggcagacaagaaccgctggatcccagaagcctgacatctgccacaaagaaatgcggt
gctgggttcttccaagcccactctggagaatgtttgccctgtgactgtaatggtcattcc
aatgagtgcttggacggctctggattctgtgtggactgcaagcagaatacaacaggagaa
cactgtgaaaaatgtctcgatggctttattggagattccatcaatggtgtgccccatatc
tgccagccatgcccgtgtccactgccccatttggccaactttgcagtatcctgctatcgg
aaaagtggagttgttcggtgtatttgcaatgaaaactatgcaggacctaattgtgaaaga
tgtgctcctggttactatggaaaccccttattgattggaagcacctgtaaaaaatgtgac
tgcagtggaaattcagatcccaacctcatttttgaagattgtgatgagatcactgggcag
tgtaggaactgtttaccccacaccactgggttcaagtgtgaacactgtgctcctggttac
tatggggatgccaggatagccaaaaactgtgcagtgtgcaattgtgggggaggcccatgt
gacagcgtaactggagaatgcttggaagaaggctttgaaccccctacaggcacggactgc
ccaatcataagctgtgataagtgtatctgggatctgactgatgaccttcggctagcatat
ctctccattgaggaaagcaagtctggtgtgctgagtgtgtcctctggggctgctgctcat
agacatgtgactgaggtcaactccaccatttaccacctcaaaactaaattgtcagaaaga
gaaaaccagtatatcctcagaaagatacaaatcaacaatgctgagaacacaatgaaaagc
attttgtctgatatggaggaattaactgaaagggaaagtcagacctccagaaagggtcaa
ctggcacagaaagaaagcatggataccattaaccatgcaactcagctcgtagagcaagcg
catgagatgagagacaaaatcaaagagataaacaacaaaatgttgtattatggagaaaag
caggaacttagctctgaggaaatctctgagaagctggtgttggctcagaagatgcttgag
gagattaaacaccgtcaaccatttcttacccaacgagaacttgtggatgaggaagcagat
gaagcccatgaattgttaaaccaggctgaaaattggcagcgactgtccaatgatactcgc
tctttgtttccggttgtcctggagcagttggatgattacaatgctaagttttcagacatc
caggaatcacttgatcaggcacttaaccgtgtcagagatgctgaagacatgaacagggtc
atagcagccaggcagcgggaccatgagaaacaacatgaaagagtaagagaacaagtagaa
agtgtgaatgcaactctgaggctgtcttcagacactctggaaattccacggctgactctt
tcagaacttgatgatataataaagaatgcatctggcatttatgctgaaatagatggagcc
aaaaatgaactacaaggaaaactagccaacctgagtaacctcggttatgatttagtccaa
gaagcaattgaccatgcacgaaatcttcagctagaagctgacgaattgagcaggaatttg
cacagttcagatatgaatggtctggttcagaaggctttggatgcttcaaatgtctatgaa
aacatcgccaattatgttaatgaagccaacgaaacagctgaatttgctttgaacatcaca
gaaagaatttatgatgctgtgagtgggattgatactcaaatcatttaccataaagatgaa
agtgagaacctcctccatcaagccagagaattgcaaacaagagcagattctagcaatgaa
gaggcagtagctgacacaagcaggcgtgtggatggagcccaagcaaggaagagctttttt
aaaaacagattaaatgatgccattaagcaactacaggctgcagaaagaggtgacactcag
catcgactagatcagtccaagatgaccattgcagaagctaacaggaccacacagcaagtc
caggaggtcaccacccccatgactaacaatatcaacaactggtcacagaatctccaaagc
tttgactcttctgctttcaacacagcagtgaactctgccagagatgcagtaagaaatctg
acagaagtcatgcctcaacttctggatcaacttcgtacagtagagcagaagaggcctgca
agcaatgtgtctgccagcatccaaaggatccgagaactcatcgctcagacaagaagtgtc
gccagcaagatccaagtatccatgatgtttgatggtcagtcagccgttgaagtacacccc
aaaactagtgtggatgacttaaagacctttacatccttgagcttgtatattaaacctcct
actgtgaagaagtcagagcaaactggaatttcagatcagtttatcctgtaccttggaagc
aaaaatgccaagaaagagtacatgggtcttgcaatcaaaaatgataacctggtgtacatt
tataatttgggaagtaaagatgtagagattcccctggacaccaagcctgtgagctcctgg
cctgctcacttcagcattgtcaagattgagagggtaggaaaacatggaaaagtattctta
acagtccccagtctaagtagtactgcagaagagaagtttattaaaaaggggcagtttaca
gaagatgactctctactggatctggacccagaggacattgtattttatgttggtggagtg
ccttcagaatttaagctccctagcagcttaaacttgcctggcttcactggttgcatagaa
ttggccactttaaataatgatgtgatcagcttgtacaactttaagcacatctatcatatg
gatcccaccaagtcagtgccctgtgcaagagacaaattggccttcacacagagccgggct
gccagttattactttgatggctctagttatgctgttgtgagggatatcacaaggagaggg
aaatttggccaggtgactcgtttcgacatagaagtccgaacaacagctgacaatggcctt
gtgctcctgatggtcaatggaagtatgtttttcagcctggaaatgcgcaatggttaccta
catgtgttctatgactttggatttagcaatggcccagttcatcttgaagatacattgaag
aaagctcgtattaatgatgcaaaataccacgagatctcaatcatttatcacaatgacaag
aaaatgattttggtagttgatagacgtcatgtcaagagcatggataatgaaaaaatgaaa
atgcctttcaaggacatatacattggaggagctccccgagaaatcttacaatccaggttt
ctaacaaaacaccttcccttagatatcaactttagaggatgtatgaagggtttccaattc
caaaagaaagactttaatttattggagcagacagaaaccctgggagttggttatggatgc
ccagaagactctcttatatctcgtagagcatacttcaatggacagagttttatttcttca
gttcagaaactatctttctttgatggctttgaaggaggttttaatttccgaacactacag
cccaatggcttgctcttctattatgcttcaggatcagatgtgttctccgtttccttgggt
aatggcagtgtgatcatggatgtgaaaggaaccaaggtgcagtctttaaataaacagtac
aatgacgggctatcccacttcatcatcacctcagtctcacctgcaagatatgagctgatg
gtagataaaaacatatatgggaatgagaatcctaccaaagggaaggcagagcaaacacaa
gcaggtgaaaagaagttttacttcggcggttcacccatcagcccccagtttgctaatttg
actggctgtataagtaatgcctactttaccagattggatagagatgtggaggttgaagat
ttccagcagtactctgaaaaggtccacacttctctttatgaatgtcccatcgaatctcca
ccactgtttctcctccacaaaaagggaaaaaattcttcgaagactaaaacaagtttgaat
aaaaagggggaaaagagtaaagatgcacctgcatgggacccagttggcctgaaattctca
gagcagcctgctccaagagactctcgttgccaactttccaaaagccctcgagccatagag
catgcgtatcagtatggaggaacagccaacagtcgccaagaatttgagcacttaaaagat
gattttggtgaaaaatctcaattttccattcgcctgaaaactcgttcttcccatggaatg
attttctatgtctcagatcaagaagagaatgacttcatgaccctattcttagcccatggt
cgcttggttttcatgtttaatattgggcacaagaaactgaaaattagaagccaagagaaa
tacaatgatggactgtggcatgatgttatatttagtcgagaaaagagcagtggcagactg
ataattgatggcctgcgagtcctggaagaaaatcttcctcctactggggctgcttggaag
atcaaaggtccaatttatttaggtggtgtagctcccggaagagctgtgaaaaatgttcag
atcaattctgtctacagtttcagcggttgtctcagcaatttccagctcaatggggcctct
gtcacctttgcatctcagacattcagcgtaacaccttgctttgagggcccaatggaaaca
ggaacatacttctcaactgaaggaggatacgtggtcctagatgaatcttttaatattggg
ttgaaattcgagattgcatttgaagtgcggcccagaagtaactctggaacccttgttcat
ggccacagtgtcaatggagaatacctgaatgttcacataaaaaatgggcaggtaatagtg
aaagtcaacaatggcatcagagacttctccacctcagtgacaccaaaacagagtctctgt
gacggcagatggcacagaatcacagtcattagagattctaatgtggttcaattggatgtg
gactctgaagtgaaccatgtggttggacccttgaatccaaaaccagttgatcacagggaa
cctgtgtttgttggaggtgttccagagtcgctattgacgccacatttggcccccagtaaa
cccttcacaggttgtatccgtcactttgtgatcgacgggcagcctgtgagcttcagtaaa
gcagccctggtcagtggtgctgtgagcatcaactcctgtcctgcagcctaa
DBGET
integrated database retrieval system
