Suncus etruscus (white-toothed pygmy shrew): 126005942
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Entry
126005942 CDS
T09902
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
setr05017
Spinocerebellar ataxia
setr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126005942 (GTF2B)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
126005942 (GTF2B)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
126005942 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126005942 (GTF2B)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
126005942 (GTF2B)
Prokaryotic type
Archaeal type
TFB
126005942 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
Sigma70_r4
RB_B
KIF9
Motif
Other DBs
NCBI-GeneID:
126005942
NCBI-ProteinID:
XP_049627230
LinkDB
All DBs
Position
4:complement(41905000..41935744)
Genome browser
AA seq
316 aa
AA seq
DB search
MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PTDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccagccgtttggatgctctcccaagagtcacatgtcctaatcatccggat
gcaattttagtggaagactacagagctggtgatatgatatgtcctgaatgtggcctggtt
gtgggtgaccgggtgattgatgtgggatctgaatggagaactttcagcaatgataaggct
acaaaggatccatctagagttggagattctcagaaccctcttctgagtgacggagatttg
tctaccatgattgggaagggtacaggagctgcaagttttgatgaatttggcaattctaaa
taccaaaatcggaggacaatgagtagttctgatcgggcaatgatgaatgcattcaaggaa
atcactaccatggcagacagaatcaacctccctcggaatatagttgatcgaacaaataat
ttattcaaacaagtatatgaacagaagagcctgaagggaagagctaatgatgccatagct
tctgcttgtctttatattgcctgtagacaagaaggggttcctaggacatttaaagaaata
tgtgctgtttcacgaatttctaagaaagaaattggccggtgctttaagcttattttgaaa
gcattagaaaccagtgtggatttgattacaactggggacttcatgtccagattttgttcc
aatctttgtcttcctaaacaagtgcagatggcagctacacatatagcccgtaaagctgtg
gaattggacttggttcctggaaggagccccatatctgtggcagcggcagctatttacatg
gcctcacaggcatcagctgagaagaggacccaaaaagaaattggagatattgctggtgtt
gcagatgttacaatcagacagtcctacagactcatctatcctcgagccccagatctattt
cctacagacttcaaatttgatacccctgtggacaaactaccacagctataa
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