Suncus etruscus (white-toothed pygmy shrew): 126005964
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Entry
126005964 CDS
T09902
Symbol
PALLD
Name
(RefSeq) palladin isoform X1
KO
K22029
palladin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126005964 (PALLD)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
126005964 (PALLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
C2-set_3
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
126005964
NCBI-ProteinID:
XP_049627247
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All DBs
Position
4:complement(118818661..119281684)
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AA seq
1365 aa
AA seq
DB search
MSETSSHDSFYDSLSDMQEESKSADFFPGLSAFLSQEEINKSLDLARRAIVNSETEDVDS
EKEILEIFNTSPESVCDKPTCQEPTTGEPASAEAEQDHRPRPGQPLPQEQTASSSPPLCK
RNPALSPLLASPSYIRSLRKSDKHNAKATQVGQAFLGKAGSQSQLCDRAANFIDELTSIF
REAAKPRNRSPNGESSSPDSGYLSPRNQSSALRNASASQSPTQDPQEMEAEAKAAETTHS
YQATQVPAGPVPGVSLSQSQMQPLQVPSAPRFIQKLRSQEVEEGNQVYLECRVTGSPAPR
VRWFCEGNELYNSPDVQIHAEGGVHTLTIAEAFEDDTGRYTCLATNPSGSDTTSAEVFIE
GASSTDSESESSVFKSKPGAMPQAQKKTTSVSLTIGSSSPKSGITTAVIQPLSVPVQQVH
SPTSYLCRPDGTTSAFFPPIFTKELQNIAASEGQVVVLECRVRGAPPLQVQWFRQGSEIQ
DSPDFRILQKKPRSTAEPEEICTLVIAETFPEDAGIFTCTARNDFGSVTSTAQLLVTSAN
TENCGYDSMGDSNNDHFQHFPPPPPTLESSSFELASKKPAELQQVNSPEFGLSMAALQMQ
FSSAENETNGVHPSHVVNGLINGKANTNKSLQTPAVLLSPTKEPPPLLAKPKLDPLQLQQ
LQNQIRLEQEALRAPPSPPFPPPPAFPELAACTGATSPEPMSALASRSAAASMQSSGSFN
YARPKQFIAAQNLGSGSAHGTPASSPSSSSLPSPLSPTPKPFGRAPLPPFGAEPDSPWGP
SSPSPPPPPPPAFSPTAAFPVLDVFPLPPPPPPLPGAHCASPGARFGPGQTPAAFLSSLL
PSQSPPVAVNALGLPKGVTPAGFPKKVNRTARIASDEEIQGSKDAVIQDLERKLRFKEDL
LNNGTPRLTYEERMARRLLGADSANVLAVPESEEETANQEYKVSSCEQRLISEIEYRLER
SPVDESGDEVQYGDAPVENGIAPFFEMKLKHYKIFEGMPVTFSCRVTGNPKPKIYWFKDG
KQISPKNDHYIIQKDLDGTCTLHTTASTLDDDGNYTVMAANPQGRVSCTGRLMVQAVNQR
GRSPRSPSGHPHARRPRSRSRDSTDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKV
SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVLSRDAGIYTCIATNRAGQNS
FSLELVVAAKEAHKAPVFVEKLQNTGVADGYPVRLECRVMGAPPPQIFWKKENESLTHST
DRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQPQNTKP
KKVRPSASRYAALSDQGLDIKAAFQPDANASHLTLNSGLVESEDL
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacttcctcccacgactccttctacgattccctatcagacatgcaagaagaa
agcaagagtgctgacttcttcccgggactctctgcttttctcagccaggaagagataaac
aagagccttgacctcgcccgtagggcaatagtcaactctgagactgaagatgtggactcg
gaaaaggagatcttggagattttcaacacctctcctgagagtgtctgtgacaagcccacc
tgccaggagcccacaactggcgagccagcatctgcagaggcagagcaggaccacaggccg
agacctgggcagcctctgccccaagaacaaacagcgagtagctctccaccgctgtgcaag
aggaaccctgccctgtccccactgctcgccagccccagttatatccggagcctccgaaag
tctgacaagcacaatgccaaagcaacccaagtgggtcaggcctttctaggcaaagctggc
tcccagagccagctgtgtgatagggcagcaaatttcattgacgagttgacatctatattc
agagaagcagccaagccaagaaacagaagccccaatggggagtcctcatccccggacagt
gggtacctgtctcccagaaaccagtcctcagccctaaggaatgcctcggccagccagagc
cccacccaagacccgcaggagatggaagcagaggccaaagcagctgaaaccactcacagc
taccaggccacgcaggtcccagcagggccagttccgggcgtttcactctcacagtcccaa
atgcagcccctccaagtcccatcagctccgaggttcatccagaagctgagaagccaagaa
gtggaggaaggaaatcaagtctacttggagtgtagagtcactggcagcccagcaccccga
gtcagatggttctgtgaaggaaacgagctatataacagtccggatgttcaaatccatgca
gagggcggggtgcacaccctgaccatagcagaggcctttgaggacgacacaggacgctac
acctgtctagctacgaaccccagcggctctgacacgacctctgcagaggtgttcattgaa
ggtgccagttcaacagactcagaaagcgaaagttcagttttcaaatcaaaacctggagct
atgccacaggctcaaaagaaaacaacttctgtttccttgactataggatcatcatctcca
aagagcggaataaccacagcggtaattcaaccgttatctgtccctgttcaacaggttcac
agtccaacttcgtatctctgcagacctgatggaaccacttctgccttctttcctcctatt
tttacaaaggaactgcagaacatagcagcatcagaggggcaagtggtggttctggaatgt
cgggttcgaggagctccccctttgcaagtccagtggttccgacaaggcagtgaaatccaa
gactctccagatttccgaatcctacagaaaaaacctagatctacagctgaacctgaggaa
atctgtaccctggtgatcgcagagactttccctgaagatgcagggatcttcacatgcaca
gcacgaaatgattttggatccgtaaccagcactgcacagctgcttgtcacctcagccaac
actgaaaactgtggctatgactcaatgggagactccaacaatgatcacttccagcatttt
ccacctcctccgcccactttggagtcaagttcctttgagttggcttcaaagaaaccagct
gagctccagcaggtgaacagtcccgagtttggacttagcatggcagcccttcaaatgcag
ttcagttctgctgagaatgaaactaatggagtccaccctagccatgtggtaaatggactg
attaatggcaaagctaacaccaataaatctcttcaaacaccagctgtcctactttcaccc
actaaggagccaccacctctgcttgccaagcccaaactggaccctctgcagctgcagcag
ctccagaaccagatacgcctggagcaggaggccttgcgggcgccgccctcgccgcccttc
ccgccgccgcccgcgttccccgaactcgcggcctgcaccggggccacctccccggagccc
atgagcgcgctggcctcccgctcggcggccgcctccatgcagtcgtccggctccttcaac
tacgcgcgccccaagcagttcatcgcggcgcagaacctgggctcggggtcggcgcacggc
acgcccgcctccagccccagctcgtccagcctgccctcgccgctgtcgcccacgcccaag
cccttcggccgggcgcccctgccgcccttcggagccgagcccgacagcccctggggcccg
tcctcgccgtcgcccccgccgccgccgcccccggccttcagccccaccgcggccttcccg
gtgctcgacgtcttcccgctgccgccgccgccaccgccgctgcccggtgcccactgcgcc
tcgcccggcgcccgcttcgggcccggccagacccccgcggcctttctcagctcgctgctg
ccttcccagtccccaccagtggctgtcaacgccctgggcctgcccaagggcgtcacccct
gcgggatttccaaagaaggtcaaccgaactgccagaatagcttctgatgaggagattcaa
ggctccaaggatgctgttattcaggacctggaacggaaacttcgcttcaaggaggacctg
ctgaacaatggcactccgaggttaacatacgaagagagaatggcccgtcgattactagga
gctgacagtgcaaacgtcttggctgttccggagtcagaagaggaaacagccaatcaggaa
tacaaagtctccagctgtgaacagagactcatcagtgagatcgagtacagactagaaagg
tctcctgtggatgagtcaggggatgaggttcagtatggagatgcacccgtggaaaatggc
atcgccccattctttgagatgaagctgaaacactacaagatctttgagggaatgcctgta
actttcagttgtcgagtgactgggaatccgaagccaaagatatattggtttaaggatggg
aagcagatctcacccaagaacgaccactacatcattcagaaggatctagatgggacctgc
acgctgcataccacagcctcaaccttggacgatgatggcaactacacagtcatggctgca
aatcctcagggccgggtcagctgtaccggacgactaatggtacaggctgtcaaccaaaga
ggtcgcagtccacgctcgccctcaggccatcctcacgccagaagacctcgttctcgatca
agggacagtacggatgaaaatgaacccattcaggagcgattcttcagaccccacttcctg
caagctccaggagacctcacagttcaggaaggcaaactctgcagaatggactgcaaagtc
agtggattacctacaccagacctgagctggcagttagatgggaagccggtgaggcctgac
agcgctcacaagatgctggtgcgtgaaaatggggtgcactccctcatcatcgagcccgtg
ctgtcccgagatgccggtatctacacctgcatcgccaccaaccgcgcggggcagaactcc
ttcagtctggagctggtggttgcagctaaagaagcacacaaggcacccgtgttcgtggag
aagctgcagaacacgggtgtggccgacgggtacccggtgcgtctggagtgccgtgtgatg
ggtgcaccgccgccacagatcttctggaagaaagaaaatgaatccctgactcacagcact
gaccgagtgagcatgcaccaggataatcatggctacatctgcctgctcattcagggagcc
acaaaggaagacgctggctggtacacggtgtcggccaagaatgaagcaggcattgtgtcc
tgtacagccaggctggacgtctacacccaatggcatcagcagccacaaaacactaagccc
aaaaaagtccggccctcggctagccgctatgcagcactttcggaccagggactagacatc
aaagcagctttccaaccggatgccaatgcatcccacctgaccctgaatagtggcttggtg
gaaagtgaggacctgtaa
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