Suncus etruscus (white-toothed pygmy shrew): 126005965
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Entry
126005965 CDS
T09902
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
setr01009
]
126005965 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126005965 (SH3RF1)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126005965 (SH3RF1)
Protein phosphatases and associated proteins [BR:
setr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126005965 (SH3RF1)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126005965 (SH3RF1)
BRITE hierarchy
Motif
Pfam:
SH3_1
SH3_9
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
zf-Nse
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
126005965
NCBI-ProteinID:
XP_049627249
EnsemblRapid:
ENSSRTG00000022585
LinkDB
All DBs
Position
4:118470862..118660848
Genome browser
AA seq
885 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV
EELPSNILLVRLLDGIKQRPWKPGPGGGAGTNCTNALRVQSSTVANCSSKDLQISHGGHQ
PRVQAWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFSKDDVLTVIRRVDENWAEG
MLADKIGIFPISYVEFNSAAKQLIEWDKPPAPGADAGEGSSMAAQSAPAPKHCDTKKNTK
KRHSFTSLTMASKSSQASQNRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHIS
TTGLIVTPPPSSPVTTGPSFMFPSDASYPAVLGAMNPPLPPPPLLASTPAGAAAATAPGM
GARPTLGPADQMAHLRPQTRPSVYVAIYPYAPRKEDELELRKGEMFLVFERCQDGWFKGT
SMHTSKIGVFPGNYVAPVTRAVTNASQSKVPMSTAGQTSRGVTMVSSSTAGGPAQKLQGN
GIAGNPGVVPTAVVSAAHIQTSPQAKVLLHMSGQMTVNQARNAVRTVAAHSQERPTAAVM
PIQVQNTAGLVPASMGLPHHPHASSQPLPTMPGPAAHATAVNLGRAGMPLACATVASLTS
SSIATTSLDTEPSGRTVGLVSGLPTSPDSASSACGNSSAAKPEKDNKKEKKGLLKLLSGA
STKRKPRASPPASPTLEVELGTGDQPLQGAVGPELPLGGAHGRAGSCPAEGDGPGSVATV
GAALLQDALHRKPGTLGTLDSNAPIAPPPRQPCSSLGPVMNESRPVVCERHRVVVSYPPQ
SEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcggccttgttggatcttctggagtgcccagtgtgtctggagcggctggat
gcttctgcaaaggtcttgccttgccagcacacgttttgcaaacgctgcttattggggatt
gtcggttcccgaaatgaactgagatgtcctgagtgcaggactttggtgggctctggcgtg
gaggagcttccaagtaacatcctgctggtcagactcctggatggcatcaagcagaggcct
tggaaacctggcccaggtgggggcgctgggaccaattgcacaaatgcattaagggtgcag
agcagcacggtagctaattgcagctccaaagatctgcagatctcccacggtggacatcag
cctcgggtgcaagcctggagccccccggtgcggggtatacctcagttaccatgtgccaaa
gcattatacaactatgaagggaaggagcccggagaccttaaattcagcaaaggtgacatc
atcattttgcggcgacaagtggatgaaaattggtaccacggggaagtcaacgggatccat
ggctttttccccaccaactttgtgcagatcatcaaaccgttacctcagcccccacctcag
tgcaaagcactttatgactttgaagtaaaagacaaggaagcagacaaagattgccttcca
ttttcaaaggatgatgttctgacggtgatcagaagagtggatgagaactgggctgaagga
atgctggcagataaaataggaatatttccaatctcctatgttgagtttaactccgcagcc
aagcagctcatagaatgggacaaacctcccgcaccgggagctgatgctggagaaggcagc
tccatggcagcccagagtgcccctgctcccaagcactgcgataccaagaagaacaccaaa
aagcgccattccttcacgtccctcaccatggccagcaagtcctcgcaggcctcccagaac
cgccactccatggagatcagccctcccgtcctcatcagctccagcaaccccactgctgct
gcccgcatcagcgaactgtccggcctctcgtgcagtgccccttctcaggttcacataagt
accaccgggttgattgtgaccccacccccaagcagcccagtgacaacgggcccctcgttc
atgtttccatctgatgcctcatacccggctgtccttggagctatgaaccctcctcttcct
ccaccacctctcctggcttctacaccagcaggagctgccgctgccacagcgcctgggatg
ggagcccggcccacattgggacctgctgaccagatggcacatttacggcctcagactcgc
cccagtgtgtatgttgctatctatccatatgctccccgaaaagaagatgagctggaactg
aggaaaggggagatgtttttagtgtttgaacgttgccaggatggctggttcaaggggacg
tcgatgcataccagcaagataggggttttccctggcaattacgtggcaccagtcacaaga
gcagtgacaaatgcttcccaatctaaagttcctatgtctactgctggccagacaagtcga
ggggtgaccatggtcagttcttccactgcaggagggccagcccagaagctccagggaaat
ggcatagctgggaatcctggtgtcgtccccactgctgtggtgtccgcagctcacatacag
acgagccctcaggctaaggttttattgcacatgagtggacagatgactgtcaaccaggcc
cgaaatgctgtgaggacagtggctgcacatagtcaggaacgtccaacagcggcagtgatg
cccatccaggtccagaacaccgccggcctggtccctgcatccatgggcctaccccatcat
ccacatgcctcctcacagccactgcccacaatgccaggcccagctgctcatgctactgcc
gtgaacttgggtcgagctggcatgcccctggcctgtgccacagttgcttcactgacctcc
tcgagcatcgccaccacctctctggacactgagcccagtggccggactgtgggtctggtc
tctggacttcccacatctcctgacagtgcttcttcggcttgtgggaacagctcagcagca
aagccagaaaaggataataaaaaagaaaaaaagggtttgttgaagttgctctctggcgcc
tccaccaaacgcaagccccgagcctcaccgccagcctcccctaccttggaagtggagttg
ggtaccggggaccagcctctgcagggcgccgtaggcccggagctgcctttggggggcgct
cacggcagggccggctcctgcccagccgaaggggacggacctgggtctgtagccacagtg
ggagctgctctgctccaggatgctcttcaccgcaagccgggcaccctgggcaccctggac
tcgaatgcacccatcgcgccaccccctcggcagccctgctcctccttgggccctgtcatg
aatgaatctcggcctgttgtctgtgaaagacatcgggtggtggtttcctatcctcctcag
agtgaggcagaacttgaactgaaagagggggatattgtgtttgttcataagaaacgagag
gacggctggttcaaaggcacattgcagcgcaatgggaaaacaggccttttcccaggaagc
tttgtggagaacatctga
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