Suncus etruscus (white-toothed pygmy shrew): 126005999
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Entry
126005999 CDS
T09902
Symbol
PRDM13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126005999 (PRDM13)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
126005999 (PRDM13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-BED
zf-C2H2_15
Zf-C2H2_ZNF451
C2CH-3rd_BIRD-IDD
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
126005999
NCBI-ProteinID:
XP_049627287
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All DBs
Position
4:69250022..69257960
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AA seq
695 aa
AA seq
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MHGAARVPATCVSADCCIPAGMRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDES
GGSPLEWIGLIRAARNPQEQTLEAIADLPGGQIFYQALRDVQPGEELTVWYSNSLAQWFD
IPTIATPTHDEKGEERYICWYCWRTFRYPNSLKAHLRFHCVLHSGGGRAFLHHQHAARPS
AARAADGLGLSPKLSTPDFAALRPHPQALRPQQACGAREHIKREASSAATTTASPLGKWG
QSKKGKDQAERVPDMSGTARGHFLGIVGGSPAGAGGLAFYPGLRSAFKPAGLARATAAAA
AAAVAQGDSYREEGGGKPGSALSLGRLLGGGRPGAEGHPHPHPHQAHHHHHHYHHANKCL
LSGDPSLPAVRGFPLLPGLPEEASAFQHVEQRVPPGATAAASLSGARFAPLPPSPGLPAL
DVAGWKACSGGECSHLPAHVMPAFTVYNGELLYGSQAAAAAAYYPLKLHFGGLLKYPESL
SYFAGPAGAAALGPAELGSLASLDREIAVHTQQLSEMAAGKGRGRLDAGSLPPAVVASGG
AGSGGGGGGGGAAGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDP
SNLNKHIRLHAEGHTPYRCEFCGKVLVRRRDLERHVKSRHPGQNALAQTVPGPGTEPDCP
LAPGEPPSDHESDVDVCFTDDPSDPEAGGGSERDL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcacggagccgcccgcgtcccggccacctgcgtgagtgccgattgctgcatccccgcc
ggcatgcgcctcgggccggtgcctggaaccttcaagctgggcaagtacctgtcagaccgc
agggaacccgggcccaagaaaaaggtgcgcatggtgagaggggagctggtggacgagtcc
gggggctcccctctggagtggatagggttaatccgggcagccaggaacccccaggaacag
actctggaagctattgcagacttaccaggaggacagatcttctaccaagcacttcgagat
gtccagccaggggaggagctgactgtatggtattccaattccttagctcagtggtttgac
atccccacaattgcaacaccgacacacgacgagaaaggggaggagcggtacatttgctgg
tactgctggaggacctttcgttacccaaacagcctcaaggcgcacctccgtttccactgc
gtactccacagcggcgggggccgcgctttcttgcaccaccagcacgcggctcggcccagc
gctgcccgggcggcggatggcctgggtctctccccgaaactctccacgcccgacttcgct
gctctgcggccccacccacaggctttgcgaccccaacaggcctgcggggcgcgggagcac
atcaagcgcgaggcctcctcggcggctacgaccaccgcgtcgcccctggggaagtggggg
cagtccaagaaggggaaggaccaggcggaacgcgtcccggacatgagcgggacggcccgg
ggacactttctgggcatcgtgggcggctcgccagcgggagcgggaggcttggctttctac
ccgggcttgcgctccgctttcaaaccagccgggctggccagggcgacggcggcagcggca
gcggcggcggtggcccaaggcgactcgtaccgggaggagggtggcgggaagcccggctcg
gctctgtccctaggcaggctgctgggcggggggcgccccggggccgagggccacccccac
ccccacccccaccaggcgcaccaccatcatcaccactaccaccatgccaacaagtgcctg
ctctcgggagacccctcgctcccggctgtgcgcggcttccctctgctgcccggcctcccg
gaggaggcgtccgctttccagcatgtggagcagcgcgtcccgcccggggccaccgccgcc
gcctctctgtccggggcgcgcttcgctccgctgcctccgagccccgggctgccggccctc
gacgtggctggctggaaggcctgctcgggcggcgagtgcagccacctgcctgcccatgtc
atgccggccttcaccgtctacaacggggagctcctctacggctcgcaggccgccgccgcc
gccgcctattacccgctcaagctgcacttcggcgggctgctcaagtaccccgagtccctc
tcctatttcgccggacccgcgggggcggccgctctgggcccggcggagttgggctccctg
gccagcctcgaccgcgagatcgccgtgcacacgcagcagctgtccgagatggcagcgggc
aaaggccgcggccgcctggacgcgggctcgctgccacccgccgtggtggcttcggggggc
gctggcagcggcggcggcggcggcggcggcggggccgcgggcaagcccaagaccggccac
ctgtgcctctactgcggcaagctgtattcgcgcaagtacgggctcaagatccacatgcgg
acgcacacgggctacaagccgctcaagtgcaaggtgtgcctgcggcccttcggcgacccc
agcaacctcaacaagcacatccggctgcacgccgagggccacacgccctaccgctgcgag
ttctgcggcaaggtgctggtgcgccgccgggacctggagcgccacgtcaagtcgcgccac
cccggccagaacgcgctggcccagaccgtgcccggccccgggaccgagcccgactgcccc
ctggcacccggggagccccccagcgaccacgagagcgacgtggacgtctgtttcaccgac
gacccgagcgaccccgaggccggaggtggcagcgagagagacttgtag
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