Suncus etruscus (white-toothed pygmy shrew): 126006059
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Entry
126006059 CDS
T09902
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
126006059 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126006059 (DMXL1)
Membrane trafficking [BR:
setr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126006059 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
126006059 (DMXL1)
RAVE complex
126006059 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
126006059
NCBI-ProteinID:
XP_049627344
LinkDB
All DBs
Position
4:complement(163614307..163773837)
Genome browser
AA seq
3038 aa
AA seq
DB search
MNLHQVLTGAANPGEHCFSVGSVGERRFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV
GCVDCSMLQGKIAASYGNVISVFEPVKVPKQKKNLEFYSQWQKSGQFFLDSKAHNITWDP
SGNRLLTSSSCLQLWTNANLEKPPEEENQDKTDLNFGDWRCIWHCKTASQVYLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRTAVTSPDRRSEIQSQGEIDFSFVYLAHPRAVNGFSWR
KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYGGDYNHWSEPVNFTNNFKRNA
SSKERIQNALDINLRHFRRGRRRSHALVAHTGYLPHQQNPHHVHRNTPLHANALCHFHIA
ASINPATDIPLLPSITSLSLSENEEKNGPFVVHWLNNKELHFTLSMEVFLQQIRSFEQPS
SETSVEDSNQADVKSDEEMDDDEDVGLKINFEKKELGKDKMVSNTSFVSLPSAAIDHQIE
VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLCKSIVMYACTKNVDLAIQQGKQKPSVLTRSTSMLFSSGHSKSTNNLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNNLACHSVLPLLLTTSHHNA
LRTPDVDQNQPYDAANAEDCSLAPQKKSTLDVPFQDPSAVYSELILWRVDPVGPLSFSGG
VSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAKK
LLYELSNHEISKYVGEVFNIVSQQSTARPGCIIALDPITKLQGRKTQLLHVFQEDFILST
HEKKSLGKDTKSDAGKSCNGFSEKFYLIVIEYTQENRSLLHMWNLHLKSVPVLLDEKVDV
KVSETIWQSEEDDYSSPEKIVSPFSQKYQACRANLQSTSKLTLSSEIVYSQELQLPEGVE
IISVKPSAGHLSSSSIYPICSAPYLLATSCSDEKVRFWRCRVMDGESTTSKNGELELVYI
WEEWPLLIEDGLHSNSSITIPGRPIEVSCAHTNRLAVAYKQPTSNSRYSQDFVMHVSIFE
CESTGGSCWVLEQTIHLDELNTVLDSDISIDSNLIAYNKQEVYLSSKESVTSNTKHLVHL
DWMSREDGSHILTIGIGSKLFMYGPLSGKIQEQTGKESLIFPLWENTRVVPLSKFVLLRS
VDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSCKQEPIITDSYNGSTPSL
VSLVKHNNLSSSGLHPPKKTLTRSMTSLAQKICGKKTAFVPVDMEDSGLFEAAHALSPTL
PQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEIVALNETESNHERRLRSLTISASGST
TRDPQAFNKSENTDYTEIDSVPPLPLYALLAADDDSCHSSLEKSSNQSTRNNSNQLSKES
YDALFQVSSLTTDSYVLETDEENAKPKVIDLSQCSPTYFGPEHAQVLSGHLLHSSLPGLS
RMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLPAYRI
QLLHQGLSTSHFAWAFHSVAEEELLNMLPAMQKDDPTWSELRAMGVGWWVRSNRILRKCI
EKVAKAAFYRKNDPLDAAIFYLAMRKKGIIWGLYRSQKDTKMTQFFGHNFEDERWRKAAL
KNAFSLLGKQRFEHSAAFFLLAGCLQDAIEVCLEKLNDIQLALIIARLYESEFDASTTYK
SILYKKILGVDSPVSELKSLNISMNSDPFLRSMAYWILEDYGNALGTLVKQPASEDDDQV
KMSTCNPAVFNFYNYLRTHPLLLRRHFGSVDAFSRHMSLTEKSGLAETISLSERRLFFTT
ASAHLKAGCPMLALEVLSKLPKVIRKTKGFCRASSFLNTSKNCSPSLKLDTKEDKSSALD
WSQSLINGFGSSSEGSSEKQSNSTLSFDWSQPSVVFQDDSLELKWDTDNEEENEDLSISR
KELKSSQSGLSKIDETSSNCTVSLDENDIINPSEDIIAVQLKFRACLKILTVELRTLSTG
YEIDGGKLRYQLYHWLEKEVIALQRTCDCCSDAEELKSTIREDEEKFGLSENTDDLPHQT
KMKQQREIFEEKRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQESQQETSE
PIFPNPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINFDSPPYPDNQNNK
VYVMHTLAASLSACIYQCLCGSHNYSSFQTNPFTGMVYQTVLLPHRHSLKTGSLDEAITP
NTSPSQWPGITSLMRLLNSSGEEAQSGLTTLLCEILTAVYLSLFIHGLATHSSNELFRIV
AHPLNDKMWSAVFGGGAHVSSKEQTHSKSLHVSSLVEEEKQNKRFRSSKMSCRESAPQTS
SLPLVNQESLPVKEKFIPPELSIWDYFIAKPFLPPSQSRAEYDSEESLESDEEEEEEDVL
TSDFHLQEHSNSNSYSWSLMRLAMVQLVLSNLKTFYPFAGHDLAELPVSSPLCHAVLKTL
QCWEQVLLRRLEIHGGPPQNYISSHTSEESVSAGPAILRHKALLEPTNTPFKSKHYLALS
VKRLWQYLVKQEEVQETFIRNIFTKKRCLNESLEDHCETIKYSLMEEPNIKKIEADLGYP
GGKARIIHKESDIITAFAVNKANRNCIAIASSHDVQELDVSGILATQIYTWVDDDTEIEA
KGSEDFLVIHARDDLTAVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMIKKPINNVRR
MTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRVTRMRFSYQGNKFGIVDADG
YLSLYQTNWKCCPIAGSIPKPYLTWQCHNKTANDFVFVSSSSLIATAGLSTDNRNVCLWD
TLVAPANSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGFTCIFDLQQRQQRQLFQSHDS
PVKAVAIDPTEQYFVTGSAEGSIKIWSFSTFTLLHTFINEHARQSIFRNIGTGVMQVETG
PANHIFSCGADGTMKMRILPDQFSPLNEVLKNDVKFIL
NT seq
9117 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgacgggcgcggccaaccccggcgagcactgcttctccgtg
ggcagcgtgggcgagcggcgcttcacggcttatgcatctggatgtgacattgtaatacta
ggaagtgattttgaaagattacaaataatcccaggagctaagcacggaaatattcaagtg
ggatgtgtagactgttcgatgctacaaggaaagattgcagcatcctatggaaatgttatc
tctgtttttgaaccagttaaagtaccgaagcaaaagaaaaatttggaattttatagtcag
tggcagaaaagtggccaattttttctagattcaaaagcacacaatataacttgggatcct
tcaggcaaccgtctattaactagctctagctgtttacaactctggacgaatgcaaacttg
gaaaagccacctgaagaagaaaatcaagataaaactgatcttaattttggggattggaga
tgcatttggcattgcaaaactgcttctcaagtttatttaatgaaattttcaccagatgga
gaattttttgccactgctgggaaggatgattgtcttttaaaggtatggtataatgtagaa
aactggcggacagctgttacttctccagatagaaggtcagaaatacaatcccaaggagaa
attgacttttcttttgtatatttggcccatcctcgagctgtaaatggattttcctggcgt
aaaaccagcaaatacatgccaagggcatctgtatgtaatgtattgttgacttgctgcaaa
gataatgtatgtcgtctttgggtagagacatttttaccaaatgactgtctgctctatgga
ggcgactacaaccattggtctgaaccagtgaacttcacaaataacttcaagagaaatgct
tctagtaaagaaagaattcaaaatgctctagatatcaatttgaggcattttcgtagaggt
cggagaagatcacatgcattggtagcacatactgggtatctgccacatcagcagaatcct
catcatgttcacagaaacactccactgcatgccaatgccctttgccactttcatattgct
gccagcattaacccagccacagatatcccacttctaccttctattacatctctaagtcta
agtgagaatgaagagaagaacggaccttttgtggtacactggctaaacaacaaagagtta
catttcactttgtccatggaagtctttttacagcaaataagaagttttgagcaaccatct
tctgagaccagtgtagaagactctaatcaggcagatgtaaaatctgatgaagaaatggat
gatgatgaggatgttggtctgaaaataaattttgaaaagaaggaattaggcaaggataaa
atggtatcaaacacaagttttgtatcattaccatcagctgccattgatcatcaaattgaa
gtgcttctgtctgagtggagtaagaatgcagacatgttattcagtattcatcctatggat
ggttctttgctggtttggcacgtggattggctggatgaataccagcctggaatgtttcgc
caagtacaggtttccttcgtttccagaattcctgtagctttcccgactggcgatgcaaat
tctctctgtaaaagcatagtgatgtacgcctgcactaaaaatgttgacttggctattcag
caaggaaaacaaaaaccctctgtcctcacacgttccacatcaatgcttttctcttctggt
catagcaaatcaactaataacttaaaattaagcatttttacccctaatgtcatgatgatt
tcaaaacatgcagatggctctttgaatcagtggctggtcagttttgctgaggaatctgct
ttttctacagttctcagtatttctcataaatctagatactgtggtcatcgttttcatctt
aacaatttagcttgccattcagtattaccattattacttactacatcacaccataatgca
ctgaggactccagatgttgaccaaaaccaaccatatgatgctgcaaatgctgaagactgt
tccttggctccacaaaagaaaagcactcttgatgtgccatttcaggatcccagtgcagtt
tatagtgaacttattctttggagggttgatcctgttgggccattgtctttttctggaggt
gtttctgagcttgcccggatcaattctcttcatgtttctgcattttctaatgttgcatgg
ctgcccacacttatacccagttactgtctaggtgcatactgcaactctcctagtgcatgc
tttgtagcaagtgatggacaatatctgagattgtatgaagcagttattgatgccaagaaa
cttctatatgaactttccaatcatgaaatctctaaatatgttggtgaagtgtttaatatc
gtaagtcaacagtcaacagcaaggccaggatgcattattgctttggatcccattaccaaa
cttcaaggcagaaaaacccaattgcttcatgtttttcaagaagattttattttgagtact
catgagaagaaaagtctgggaaaagatacaaaatctgatgcaggcaaatcttgtaatgga
ttttctgaaaaattctacttaattgtaatagaatatactcaagagaaccgttcactgttg
cacatgtggaatttacatttaaaatctgttcctgtcttattggatgaaaaagtagatgta
aaagtatctgaaaccatttggcagtctgaagaagatgattattcttctccagagaagatt
gtgtctcctttttcacagaaatatcaggcttgcagagcaaatctccagagtaccagcaag
ttgactctgtcttcagaaatagtttatagtcaagaattgcaattgccagaaggagtggag
ataataagtgttaaaccctcagcaggacatttgagttcttcttccatatatcctatatgc
agtgctccatatttgttggcaacttcatgttcagatgagaaagtaagattttggagatgc
agagtaatggatggagagtccaccacatccaagaatggagaattggagcttgtgtatatt
tgggaagaatggccactacttattgaagatggacttcacagcaatagtagtataactata
cctggtaggcctattgaagttagctgtgcacacacaaaccgcctagcagtagcatacaag
caacccacatctaatagtagatattctcaggactttgtgatgcatgtgagtatttttgaa
tgtgaatctacaggaggttcttgttgggtccttgaacagacaattcatttagatgagtta
aatacagtgttggattctgacattagtatcgatagcaatttaattgcctataataaacaa
gaggtatatttatccagtaaagaaagtgtcacatcaaacacaaagcacttagtacattta
gactggatgtctagagaggatggttctcatatcttgactataggaatcggatcaaaactc
tttatgtatggacccttgtctggcaagatacaagaacagactggtaaggaaagccttatt
tttcctctctgggagaatactagagttgtacctctttctaagtttgtgcttttacgaagt
gtagacttggtctcttctgtagaaggctctccaccttttcctgtttctttatcctgggtc
cgggatggcatccttgttgtaggaatggattgtgaaatgcatgtatattcccagtggcag
ccatcttgcaaacaagaacctattataacagattcatataatgggagtactccatcttta
gtaagtttagtgaaacacaataacttatcaagttctggattacatcctccaaagaaaact
ctaactcgatctatgaccagtcttgcacagaaaatatgtggaaagaaaacggcatttgtt
cctgtggatatggaagattcaggtctttttgaagcagctcatgctctgtccccaacttta
cctcagtaccatcctttacagcttttggaactcatggatcttggcaaagttcggagagca
aaagccatcttgtcacatcttgttaagtgcattgctggagaaattgtggctcttaatgaa
actgagtctaatcatgagcgccgtctcaggtctctcactatcagtgcaagtggcagcact
accagagacccacaggcattcaacaagagtgagaatactgattacacagaaatagattct
gtccctccacttcctttatatgctttacttgcagcagatgatgatagctgtcactcatct
ttggagaaatctagcaatcagagtaccagaaataactcaaaccaattgtcaaaagaaagt
tatgatgccctttttcaggtttcatctttaactactgatagttatgtgttagaaacagat
gaagaaaatgcaaagcccaaggttattgacctttcacagtgcagtccaacttactttggt
cctgaacatgctcaggttctttctggacacttgcttcattctagtttaccagggctcagt
cggatggaacagatgtctctgatggccttagcagatacaattgcaactacgagcaccgat
attggagaaagcagagacagaagccaaggtggagaaacacttgatgaatgtggattaaaa
tttcttttggctgttcgacttcatacatttcttaccacatcccttccagcgtatcgaatt
caactccttcatcaaggcctgtctacaagccactttgcctgggcatttcactcagtagca
gaagaagaactactgaacatgttgccagcaatgcagaaagatgaccccacttggtctgaa
ctcagagctatgggtgtgggatggtgggttcggagtaaccgtatcttacgcaaatgcata
gaaaaagtagccaaagccgccttttatagaaagaatgatcctttagatgcagccattttt
taccttgcaatgagaaagaaaggtatcatttggggattatatagatcccaaaaagataca
aagatgacacagttttttggacataattttgaggatgagcggtggcggaaagcagcttta
aagaatgctttttctttgttagggaaacaaagatttgaacattctgcagccttttttctt
ttagctggttgcctccaagatgcaattgaggtctgtctcgagaaactgaatgatatccag
ttggctcttataatagcaagactttatgagtctgaatttgatgcatctacaacatataaa
tctattttatataaaaaaattttgggagttgattctcctgtcagtgaactgaagtcattg
aacataagtatgaattctgatcctttccttcggagcatggcatattggattctagaagat
tacggtaatgctctgggaacactggtaaagcaacctgcttcagaggatgacgatcaagtc
aagatgtcaacttgtaaccctgcagtttttaatttctataattatctaagaacacatcct
cttttgctgagacgtcattttggatcagtggatgcattttccagacacatgagtttaaca
gaaaaaagtggactagcagagacaattagtttaagtgaaagaagattattttttactact
gccagtgctcatttaaaagctggttgccctatgttggctttggaagtattatcaaagttg
ccaaaagtcatcagaaaaacaaaaggtttttgtagagcatcgagttttctgaatactagt
aaaaattgttcaccttcactaaaattggatacaaaggaagataaatcttctgctctagat
tggtcacagtcactgatcaatggttttggatcttcttcagagggctcctcagagaaacaa
tcaaattccactctttcttttgactggagtcaaccaagtgttgtatttcaggatgactct
ttagaattaaaatgggacactgataatgaggaagaaaatgaagatctctctatttcaagg
aaagaattgaaatcttcacagagcggcctcagtaaaatagatgaaacaagttctaattgc
acagtctctctagatgaaaatgatattataaatccatcagaagatatcattgcagttcag
ttaaagtttagagcatgtttaaaaattctcacagtggaacttcgtactttatccactggc
tatgaaattgatggtggaaaattgcgttatcaactataccattggcttgaaaaagaagtg
atagctcttcagagaacttgtgactgttgttcagatgctgaagaattaaagtccactatt
agagaagatgaagagaaatttggattaagtgaaaatactgatgacttgcctcaccaaaca
aaaatgaagcaacagagagaaatctttgaggaaaaaagacagtggcttttgaaatatcag
tcactcttacgaatgtttcttagttactgtatacttcatggatcccatggtgggggactt
gcatctgtgagaatggaattaattttacttttgcaagaatctcagcaggaaacgtcagaa
cccatatttcctaaccctctgtctgagcagacctcagtccctctcctttttgcttgtaca
gccagtgccaaaacagtggttgccaatccattattgcaccttagtaatctaactcatgat
attctgcatgccataataaactttgattcaccaccctatcccgataaccaaaacaacaaa
gtatatgtcatgcatactttagcagcctcactttctgcttgtatttatcagtgcctttgt
ggtagtcataattacagttcatttcaaacaaatccctttactggaatggtgtatcaaaca
gttcttcttccccatcgtcactctttgaagacaggaagcttagatgaagctataactccg
aatacatcaccatctcaatggccagggattacttctctaatgcgacttttgaattcttct
ggtgaggaagcccagtcaggactaacaaccctgctctgtgagattctcacagcagtgtac
ctgagtctcttcattcatggcttggcaacacattccagtaatgagctgtttcggattgtg
gcccatcctctaaatgacaaaatgtggtctgctgtatttggtggaggtgcacatgtttcc
agcaaagaacagacacactcaaaatctttacatgtttcttcactagtggaagaagagaaa
cagaacaaacgtttcaggtcatcaaaaatgtcttgcagagaatctgctccacagacctct
tccttaccattggtaaaccaggaatcacttccagtcaaagagaaattcatcccacctgag
ctgagtatctgggattatttcatagccaagccttttctacccccatcacaaagtagagca
gaatatgattcagaggagagtctggaaagtgatgaggaggaggaggaggaggatgtttta
acttcagattttcatctccaagaacattctaactcaaattcatatagttggtcattgatg
cgattggcaatggtgcagttggtgctcagtaatttgaagactttctatccctttgcaggt
catgaccttgcagagcttccagtcagttcaccactttgtcatgcagttctaaaaactctt
cagtgttgggaacaagttcttcttaggcgtcttgaaatccatggtgggccacctcaaaac
tatatttcaagtcatacctctgaagaaagtgtgtctgcaggtcctgctattcttcgccat
aaagctttgctagaacctacaaacactcctttcaaatccaaacactatttggcactgtct
gtgaagagactttggcagtatttggtaaagcaggaagaagttcaggaaacatttatcaga
aatatattcacaaagaaaagatgtttaaatgagtctttagaggaccactgtgaaaccatc
aaatattctctgatggaggagccaaacatcaaaaagatagaagcagatttgggatatcct
ggaggtaaagcaagaattattcataaagaatctgatatcattactgcctttgctgttaat
aaagcaaatagaaactgcatagcaattgcatctagccacgacgttcaagaactggatgtt
tctggaattttggctacacagatctatacatgggtagatgatgacacagaaatagaagcc
aaagggtcagaagatttcttggtcatccatgctcgagatgatttgacagctgtgcaaggc
accaccccctatacacatagcaatcctggcactccaatcaatatgccatggcttggtagt
acacagactggcagaggagcgtctgtgatgattaagaaacctattaataatgtcagaaga
atgacttctcatccaacacttccttactatctgactggagctcaagatggaagtgtcaga
atgtttgaatggggccattctcaacaaataacgtgttttcgatctggtggcaattcaaga
gttacaagaatgagatttagctatcagggaaataagtttggaatagttgatgccgatgga
tatttaagcttgtatcagacaaactggaaatgctgtcctattgccggaagcatacctaaa
ccatacctgacttggcaatgtcataacaaaacagccaatgattttgtcttcgttagttct
tcttctttgatagctactgctggtctttcaactgataatagaaatgtatgtttgtgggat
actctggtagcacctgccaatagtttagttcatgcttttacttgccacgatagtggagct
actgttttagcatatgctccaaaacatcagctactaatatctggtggccgaaaaggcttt
acctgcatatttgaccttcagcaacgacaacagaggcaactttttcagagccatgattct
cctgttaaagccgttgctattgatccaacagaacagtactttgttacaggatccgcagaa
ggcagcataaagatttggagcttctctaccttcactcttctccacacttttatcaatgaa
catgctcggcagtccattttcaggaatattggaactggagtgatgcaagtggagacagga
ccagcaaatcacattttttcatgtggcgctgatggaacaatgaaaatgagaatactgcca
gatcagtttagcccattaaatgaagtcttgaaaaatgatgtgaaatttatactatag
DBGET
integrated database retrieval system
