Suncus etruscus (white-toothed pygmy shrew): 126006106
Help
Entry
126006106 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04622
RIG-I-like receptor signaling pathway
setr05161
Hepatitis B
setr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
126006106
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
126006106
09172 Infectious disease: viral
05161 Hepatitis B
126006106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126006106
03041 Spliceosome [BR:
setr03041
]
126006106
03036 Chromosome and associated proteins [BR:
setr03036
]
126006106
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126006106
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126006106
mRNA cycle factors
Common to processing body (P body) and stress granule
126006106
Spliceosome [BR:
setr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126006106
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126006106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
126006106
NCBI-ProteinID:
XP_049627408
LinkDB
All DBs
Position
4:167079131..167081182
Genome browser
AA seq
660 aa
AA seq
DB search
MSHVVVENALGLDQQFAGLDLNSSDNQSGGSTASKGRSIPPHLRNREATKGFYDKDSSGW
STSKDKDVYSSFESCGDSRGKSSFFSDQGSGSRGRFDDRGRSDYDGGRGDKSGFGKFEHG
GNSLWCDKSDEDDXSKPLPPSERLERELFSGGNTGINFKKYDDIPVEATGNNCPPHIDSF
SDVEMGEIIMGNIELTHYTRPTPVQKHAIPIIKEKRDLMSCAQTGSGKTAAFLLPILSQI
YADGPGKAVRAMKENGRYGRRKQFPISLVLAPTRELAVQIYEEARKFSYRSRVHPSVVYG
GADIGQQIRDLERGCHLLVATPGRLLDMMERGKIGLDFCKYLVLDEADQMLDMGFEPQIR
RIVEQDSMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENIMQKVVWV
EDGDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREE
ALYQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHCIGHTGRVGNLGLAT
SFFNERNANITKDLLDLLVEVKQDVPSWLESMAYEHHYKGGSRGRSKSSLFSGGFGARDY
RQSSGTSSSSFSSSRASSSRSGGGGHGGSKXFGGGGYGGFYNSDGYGGNYNFQWVDWWSN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtggtggaaaatgcgcttgggctggaccagcagtttgctggcctagac
ctgaactcttcagataatcagagtggaggaagtacagccagcaaaggacgctctatccct
cctcacttaaggaaccgagaggctactaaaggattttatgataaagacagttcagggtgg
agcaccagtaaagataaggatgtatacagcagttttgaatcttgtggtgattccaggggg
aagtcaagcttcttcagtgatcaaggaagtggatcacggggaagatttgatgatcgggga
aggagtgattacgatggtggccgcggtgacaaaagtggctttggaaaatttgaacatggt
gggaatagtctctggtgtgacaaatctgatgaagatgattagtcaaaaccactccctcca
agtgaacgcttggaacgggaactcttttctggaggcaacactgggattaactttaagaag
tatgatgacattccagttgaggcaacaggaaataactgtcctccacacattgacagtttt
agtgatgttgagatgggagagattattatgggaaatattgagcttacccattacactcgt
ccaactccagtgcaaaagcatgctattcctattatcaaagagaagagggacttgatgtct
tgtgcccaaacaggatctggaaaaactgcagcttttctcttgcctattttgagtcagatt
tatgcagatggtccaggcaaggctgtgagggccatgaaggaaaatggaaggtacggacgt
cgcaaacaattccccatttccttggtactggcaccaactcgagaattggcagtacagatc
tatgaggaagccagaaaattttcatatcgatcaagagttcatccttctgtggtttatggt
ggtgctgatattggtcagcagattcgagacttagaacgtggatgccacttgttagtagcc
accccaggacgtctgctagacatgatggagagaggaaagattggattagacttctgcaaa
tacttggtgttggatgaagctgatcagatgttggatatggggtttgaacctcagatacgc
agaatagttgaacaggattctatgccaccaaaaggagtccgtcacaccatgatgtttagt
gctactttccccaaggaaatacagatgcttgctcgtgatttcttggatgaatacatcttt
ttggctgttggaagagttggctctacctctgagaatattatgcagaaagtggtttgggtg
gaagatggagacaagcggtcatttcttcttgaccttctaaatgcaacaggcaaagactca
ctgacgttagtgtttgtggagaccaaaaagggtgcagattctctggaggacttcttgtac
catgaaggatatgcttgtaccagtatccatggagacagatctcagagagatcgagaagag
gccctttaccagttccgttcaggaaaaagtccaatcttggtggctacagcagtagcagca
agaggattggacatatcaaatgtgaaacatgttatcaattttgatttaccaagtgatatt
gaagaatatgtacattgcataggccatacaggacgtgtgggaaaccttggccttgccact
tcattctttaatgaaagaaatgcaaatattaccaaggatttgctggatcttctcgttgaa
gtcaagcaggatgtgccatcttggttagaaagcatggcttatgaacaccactacaaggga
ggcagtcgtgggagatccaaaagtagtctattcagtggaggatttggtgcccgggactat
cgacaaagcagtggtaccagtagctccagcttcagtagtagccgtgcaagcagcagccgc
agtggtggcggaggccatgggggcagcaaangatttggaggaggtggctatggaggcttt
tacaacagtgatggatacggagggaactacaacttccagtgggttgactggtggagtaac
tga
DBGET
integrated database retrieval system
